bigWigFile_t Struct Reference

A structure that holds everything needed to access a bigWig file. More...

#include <bigWig.h>

Data Fields
URL_t *	URL
bigWigHdr_t *	hdr
chromList_t *	cl
bwRTree_t *	idx
bwWriteBuffer_t *	writeBuffer
int	isWrite
int	type

Detailed Description

A structure that holds everything needed to access a bigWig file.

Field Documentation

cl

chromList_t* bigWigFile_t::cl

A list of chromosome names (the order is the ID).

hdr

bigWigHdr_t* bigWigFile_t::hdr

The file header.

idx

bwRTree_t* bigWigFile_t::idx

The index for the full dataset.

isWrite

int bigWigFile_t::isWrite

0: Opened for reading, 1: Opened for writing.

type

int bigWigFile_t::type

0: bigWig, 1: bigBed.

URL

URL_t* bigWigFile_t::URL

A pointer that can handle both local and remote files (including a buffer if needed).

writeBuffer

bwWriteBuffer_t* bigWigFile_t::writeBuffer

The buffer used for writing.

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The documentation for this struct was generated from the following file:

• bigWig.h