Last updated: 2018-09-05
workflowr checks: (Click a bullet for more information) ✔ R Markdown file: up-to-date 
Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.
 ✔ Environment: empty 
Great job! The global environment was empty. Objects defined in the global environment can affect the analysis in your R Markdown file in unknown ways. For reproduciblity it’s best to always run the code in an empty environment.
 ✔ Seed: 
set.seed(20180820) 
The command set.seed(20180820) was run prior to running the code in the R Markdown file. Setting a seed ensures that any results that rely on randomness, e.g. subsampling or permutations, are reproducible.
 ✔ Session information: recorded 
Great job! Recording the operating system, R version, and package versions is critical for reproducibility.
 ✔ Repository version: a8bba98 
wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:
Ignored files:
    Ignored:    .DS_Store
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    analysis/.DS_Store
    Ignored:    analysis/assets/
    Ignored:    data-raw/
    Ignored:    data/csv/
    Ignored:    data/raster/
    Ignored:    data/sf/
    Ignored:    docs/.DS_Store
Untracked files:
    Untracked:  .Rbuildignore
    Untracked:  analysis/mapping.Rmd
Unstaged changes:
    Modified:   .gitignore
    Modified:   analysis/_site.yml
    Modified:   analysis/index.Rmd
Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes. 
| File | Version | Author | Date | Message | 
|---|---|---|---|---|
| html | a8bba98 | annakrystalli | 2018-09-05 | Build site. | 
| Rmd | 592790b | annakrystalli | 2018-09-05 | workflowr::wflow_publish(“analysis/intro.Rmd”) | 
| html | acb8236 | annakrystalli | 2018-09-04 | Build site. | 
| Rmd | 37ee106 | annakrystalli | 2018-09-04 | workflowr::wflow_publish(“analysis/intro.Rmd”) | 
| html | aacbdfc | annakrystalli | 2018-09-04 | Build site. | 
| html | b1c1223 | annakrystalli | 2018-09-04 | Build site. | 
| Rmd | e410fc8 | annakrystalli | 2018-09-04 | workflowr::wflow_publish(c(“analysis/index.Rmd”, | 
On github: https://github.com/annakrystalli/gis-workshop + click on Clone or download + click on Download ZIP + Unzip the file
We will be working in an Rstudio project. I recommend this workflow for all your projects because it keeps your work portable and self contained
We will also be using Rmd notebooks. I like them because you can see the outputs of code as you write. You can also make notes around your code using markdown. See further resources for more details.
The majority of the workshop I will be live coding 😨 so that you can follow along. You will get a lot more out of the workshop if you do.
sf) have drastically simplified spatial data classes and workflows.sessionInfo()
R version 3.4.4 (2018-03-15)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS High Sierra 10.13.3
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib
locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8
attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     
loaded via a namespace (and not attached):
 [1] Rcpp_0.12.18      rstudioapi_0.7    knitr_1.20       
 [4] whisker_0.3-2     magrittr_1.5      workflowr_1.0.1  
 [7] rlang_0.2.1       stringr_1.3.1     tools_3.4.4      
[10] R.oo_1.21.0       git2r_0.21.0      htmltools_0.3.6  
[13] yaml_2.1.19       rprojroot_1.3-2   digest_0.6.15    
[16] assertthat_0.2.0  crayon_1.3.4      purrr_0.2.5      
[19] R.utils_2.6.0     glue_1.2.0.9000   evaluate_0.11    
[22] rmarkdown_1.10    emo_0.0.0.9000    stringi_1.2.4    
[25] compiler_3.4.4    backports_1.1.2   R.methodsS3_1.7.1
[28] lubridate_1.7.4  
This reproducible R Markdown analysis was created with workflowr 1.0.1