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{ "type": "Block", "value": " haven't translated these yet\n\n describe('hierarchicalTableToTree', function() {\n var treePairs = [{\"p\":\"animal\",\"c\":\"mammal\"},{\"p\":\"animal\",\"c\":\"reptile\"},{\"p\":\"animal\",\"c\":\"fish\"},{\"p\":\"animal\",\"c\":\"bird\"},{\"p\":\"bird\",\"c\":\"kiwi\"},{\"p\":\"kiwi\",\"c\":\"orange tailed kiwi\"},{\"p\":\"plant\",\"c\":\"tree\"},{\"p\":\"plant\",\"c\":\"bush\"},{\"p\":\"plant\",\"c\":\"grass\"},{\"p\":\"plant\",\"c\":\"fruit\"},{\"p\":\"fruit\",\"c\":\"kiwi\"},{\"p\":\"kiwi\",\"c\":\"purple kiwi\"},{\"p\":\"tree\",\"c\":\"oak\"},{\"p\":\"tree\",\"c\":\"maple\"},{\"p\":\"oak\",\"c\":\"pin oak\"},{\"p\":\"mammal\",\"c\":\"primate\"},{\"p\":\"mammal\",\"c\":\"bovine\"},{\"p\":\"bovine\",\"c\":\"cow\"},{\"p\":\"bovine\",\"c\":\"ox\"},{\"p\":\"primate\",\"c\":\"monkey\"},{\"p\":\"primate\",\"c\":\"ape\"},{\"p\":\"ape\",\"c\":\"chimpanzee\"},{\"p\":\"ape\",\"c\":\"gorilla\"},{\"p\":\"ape\",\"c\":\"me\"}];\n var tree;\n it('should work with (data, parentProp, childProp) params', function() {\n tree = _.hierarchicalTableToTree(treePairs, 'p', 'c');\n expect(tree).toBeDefined();\n });\n it('should make this tree', function() {\n var paths = _.invoke(tree.flattenTree(), 'namePath');\n expect(paths).toEqual([\"animal\", \"animal/mammal\", \"animal/mammal/primate\", \"animal/mammal/primate/monkey\", \"animal/mammal/primate/ape\", \"animal/mammal/primate/ape/chimpanzee\", \"animal/mammal/primate/ape/gorilla\", \"animal/mammal/primate/ape/me\", \"animal/mammal/bovine\", \"animal/mammal/bovine/cow\", \"animal/mammal/bovine/ox\", \"animal/reptile\", \"animal/fish\", \"animal/bird\", \"animal/bird/kiwi\", \"plant\", \"plant/tree\", \"plant/tree/oak\", \"plant/tree/oak/pin oak\", \"plant/tree/maple\", \"plant/bush\", \"plant/grass\", \"plant/fruit\", \"plant/fruit/kiwi\", \"plant/fruit/kiwi/orange tailed kiwi\", \"plant/fruit/kiwi/purple kiwi\"]);\n });\n });\n }\n ", "range": [ 6295, 7984 ], "loc": { "start": { "line": 150, "column": 2 }, "end": { "line": 165, "column": 4 } } } ], "trailingComments": [ { "type": "Block", "value": "\nvar test_data = [\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Impacted cerumen\", \"drug_era_start_date\": \"2008-02-19\", \"drug_era_end_date\": \"2008-02-19\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Otogenic otalgia\", \"drug_era_start_date\": \"2008-02-19\", \"drug_era_end_date\": \"2008-02-19\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Acquired trigger finger\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Drug\", \"concept_name\": \"Methylprednisolone\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Pes anserinus bursitis\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Benign essential hypertension\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Familial hyperchylomicronemia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Hyperlipidemia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Tachycardia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Amblyopia\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Astigmatism\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Myopia\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Nonexudative age-related macular degeneration\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Malignant lymphoma of intra-abdominal lymph nodes\", \"drug_era_start_date\": \"2008-03-31\", \"drug_era_end_date\": \"2008-03-31\"},\n {\"person_id\": \"0\", \"domain_id\": \"Drug\", \"concept_name\": \"pantoprazole\", \"drug_era_start_date\": \"2008-03-31\", \"drug_era_end_date\": \"2008-03-31\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Mobitz type II atrioventricular block\", \"drug_era_start_date\": \"2008-04-04\", \"drug_era_end_date\": \"2008-04-04\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Benign prostatic hypertrophy with outflow obstruction\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Chronic cystitis\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Chronic hepatitis C\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Acute pyelonephritis with medullary necrosis\", \"drug_era_start_date\": \"2008-05-08\", \"drug_era_end_date\": \"2008-05-08\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Urinary tract infectious disease\", \"drug_era_start_date\": \"2008-05-08\", \"drug_era_end_date\": \"2008-05-08\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Exudative age-related macular degeneration\", \"drug_era_start_date\": \"2008-05-20\", \"drug_era_end_date\": \"2008-05-20\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Disorder of lipid metabolism\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Open wound of foot except toes with complication\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Peripheral vascular disease\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"}];\n\nvar domcon = _.supergroup(test_data, ['domain_id','concept_name']);\n//var domcon = _.supergroup(person_eras, ['domain_id']);\nconsole.log(domcon.rawValues());\n", "range": [ 8003, 12341 ], "loc": { "start": { "line": 169, "column": 0 }, "end": { "line": 200, "column": 2 } } } ] } ], "sourceType": "module", "range": [ 0, 8002 ], "loc": { "start": { "line": 1, "column": 0 }, "end": { "line": 168, "column": 12 } }, "comments": [ { "type": "Line", "value": "var gradesByLastName = _.supergroup(gradeBook, 'lastName');", "range": [ 739, 800 ], "loc": { "start": { "line": 15, "column": 0 }, "end": { "line": 15, "column": 61 } } }, { "type": "Block", "value": "\n \"should be a Supergroup State\": function(selector) {\n assert.instanceOf(selector, _.stateClass);\n },\n \"should allow selection by value\": function(selector) {\n selector.selectByVal(gradesByGradeLastName.lookup(\"A\"));\n assert.deepEqual(selector.selectedRecs(), [gradeBook[3]]);\n },\n \"should allow selection by filter\": function(selector) {\n selector.selectByVal(gradesByGradeLastName.lookup(\"A\"));\n assert.deepEqual(selector.selectedRecs(), [gradeBook[3]]);\n },\n ", "range": [ 1149, 1638 ], "loc": { "start": { "line": 28, "column": 2 }, "end": { "line": 40, "column": 4 } } }, { "type": "Line", "value": "console.log('lookup:', gradesByGradeLastName.lookup(\"B\"));", "range": [ 3223, 3283 ], "loc": { "start": { "line": 76, "column": 4 }, "end": { "line": 76, "column": 64 } } }, { "type": "Block", "value": "\n \"sortBy\": function() {\n assert.deepEqual(gradesByGradeLastName.leafNodes().sortBy(\n function(d){ return d.namePath(); }).namePaths(),\n [ 'A/Sassoon', 'B/Androy', 'B/Gold', 'C/Gold' ]);\n },\n \"previous\": function() {\n assert.deepEqual(gradesByGradeLastName.sort()[2].previous().namePath(),\n \"B\");\n },\n \"vals should have rootList\": function() {\n assert.equal(gradesByGradeLastName.lookup(['A','Sassoon']).rootList(),\n gradesByGradeLastName);\n },\n ", "range": [ 5031, 5530 ], "loc": { "start": { "line": 115, "column": 2 }, "end": { "line": 129, "column": 4 } } }, { "type": "Block", "value": "\n \"asRootVal\": {\n topic: function(){ \n // make new version of gradesByGradeLastName so asRootVal doesn't mess up other one\n var gradesByGradeLastName = _.supergroup(gradeBook, ['grade','lastName']);\n var root = gradesByGradeLastName.asRootVal();\n return {gradesByGradeLastName:gradesByGradeLastName, root:root};\n }, \n 'should set its dimension as \"root\"': function(topic) {\n assert.equal(topic.root.dim, 'root');\n },\n 'should contain all the records': function(topic) {\n assert.equal(topic.root.aggregate(_.sum, 'num'), 14);\n },\n 'should namePath to root': function(topic) {\n assert.deepEqual(topic.gradesByGradeLastName.leafNodes().namePaths(),\n [ 'Root/C/Gold','Root/B/Gold','Root/B/Androy','Root/A/Sassoon' ]);\n }\n ", "range": [ 5536, 6292 ], "loc": { "start": { "line": 131, "column": 1 }, "end": { "line": 149, "column": 4 } } }, { "type": "Block", "value": " haven't translated these yet\n\n describe('hierarchicalTableToTree', function() {\n var treePairs = [{\"p\":\"animal\",\"c\":\"mammal\"},{\"p\":\"animal\",\"c\":\"reptile\"},{\"p\":\"animal\",\"c\":\"fish\"},{\"p\":\"animal\",\"c\":\"bird\"},{\"p\":\"bird\",\"c\":\"kiwi\"},{\"p\":\"kiwi\",\"c\":\"orange tailed kiwi\"},{\"p\":\"plant\",\"c\":\"tree\"},{\"p\":\"plant\",\"c\":\"bush\"},{\"p\":\"plant\",\"c\":\"grass\"},{\"p\":\"plant\",\"c\":\"fruit\"},{\"p\":\"fruit\",\"c\":\"kiwi\"},{\"p\":\"kiwi\",\"c\":\"purple kiwi\"},{\"p\":\"tree\",\"c\":\"oak\"},{\"p\":\"tree\",\"c\":\"maple\"},{\"p\":\"oak\",\"c\":\"pin oak\"},{\"p\":\"mammal\",\"c\":\"primate\"},{\"p\":\"mammal\",\"c\":\"bovine\"},{\"p\":\"bovine\",\"c\":\"cow\"},{\"p\":\"bovine\",\"c\":\"ox\"},{\"p\":\"primate\",\"c\":\"monkey\"},{\"p\":\"primate\",\"c\":\"ape\"},{\"p\":\"ape\",\"c\":\"chimpanzee\"},{\"p\":\"ape\",\"c\":\"gorilla\"},{\"p\":\"ape\",\"c\":\"me\"}];\n var tree;\n it('should work with (data, parentProp, childProp) params', function() {\n tree = _.hierarchicalTableToTree(treePairs, 'p', 'c');\n expect(tree).toBeDefined();\n });\n it('should make this tree', function() {\n var paths = _.invoke(tree.flattenTree(), 'namePath');\n expect(paths).toEqual([\"animal\", \"animal/mammal\", \"animal/mammal/primate\", \"animal/mammal/primate/monkey\", \"animal/mammal/primate/ape\", \"animal/mammal/primate/ape/chimpanzee\", \"animal/mammal/primate/ape/gorilla\", \"animal/mammal/primate/ape/me\", \"animal/mammal/bovine\", \"animal/mammal/bovine/cow\", \"animal/mammal/bovine/ox\", \"animal/reptile\", \"animal/fish\", \"animal/bird\", \"animal/bird/kiwi\", \"plant\", \"plant/tree\", \"plant/tree/oak\", \"plant/tree/oak/pin oak\", \"plant/tree/maple\", \"plant/bush\", \"plant/grass\", \"plant/fruit\", \"plant/fruit/kiwi\", \"plant/fruit/kiwi/orange tailed kiwi\", \"plant/fruit/kiwi/purple kiwi\"]);\n });\n });\n }\n ", "range": [ 6295, 7984 ], "loc": { "start": { "line": 150, "column": 2 }, "end": { "line": 165, "column": 4 } } }, { "type": "Block", "value": "\nvar test_data = [\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Impacted cerumen\", \"drug_era_start_date\": \"2008-02-19\", \"drug_era_end_date\": \"2008-02-19\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Otogenic otalgia\", \"drug_era_start_date\": \"2008-02-19\", \"drug_era_end_date\": \"2008-02-19\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Acquired trigger finger\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Drug\", \"concept_name\": \"Methylprednisolone\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Pes anserinus bursitis\", \"drug_era_start_date\": \"2008-02-23\", \"drug_era_end_date\": \"2008-02-23\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Benign essential hypertension\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Familial hyperchylomicronemia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Hyperlipidemia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Tachycardia\", \"drug_era_start_date\": \"2008-02-28\", \"drug_era_end_date\": \"2008-02-28\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Amblyopia\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Astigmatism\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Myopia\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Nonexudative age-related macular degeneration\", \"drug_era_start_date\": \"2008-03-09\", \"drug_era_end_date\": \"2008-03-09\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Malignant lymphoma of intra-abdominal lymph nodes\", \"drug_era_start_date\": \"2008-03-31\", \"drug_era_end_date\": \"2008-03-31\"},\n {\"person_id\": \"0\", \"domain_id\": \"Drug\", \"concept_name\": \"pantoprazole\", \"drug_era_start_date\": \"2008-03-31\", \"drug_era_end_date\": \"2008-03-31\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Mobitz type II atrioventricular block\", \"drug_era_start_date\": \"2008-04-04\", \"drug_era_end_date\": \"2008-04-04\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Benign prostatic hypertrophy with outflow obstruction\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Chronic cystitis\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Chronic hepatitis C\", \"drug_era_start_date\": \"2008-04-24\", \"drug_era_end_date\": \"2008-04-24\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Acute pyelonephritis with medullary necrosis\", \"drug_era_start_date\": \"2008-05-08\", \"drug_era_end_date\": \"2008-05-08\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Urinary tract infectious disease\", \"drug_era_start_date\": \"2008-05-08\", \"drug_era_end_date\": \"2008-05-08\"},\n {\"person_id\": \"0\", \"domain_id\": \"Condition\", \"concept_name\": \"Exudative age-related macular degeneration\", \"drug_era_start_date\": \"2008-05-20\", \"drug_era_end_date\": \"2008-05-20\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Disorder of lipid metabolism\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Open wound of foot except toes with complication\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"},\n {\"person_id\": \"1494\", \"domain_id\": \"Condition\", \"concept_name\": \"Peripheral vascular disease\", \"drug_era_start_date\": \"2010-12-01\", \"drug_era_end_date\": \"2010-12-01\"}];\n\nvar domcon = _.supergroup(test_data, ['domain_id','concept_name']);\n//var domcon = _.supergroup(person_eras, ['domain_id']);\nconsole.log(domcon.rawValues());\n", "range": [ 8003, 12341 ], "loc": { "start": { "line": 169, "column": 0 }, "end": { "line": 200, "column": 2 } } } ] }