{
  "schema": "project-telos.science-research-adapters/v1",
  "verified_at": "2026-06-28",
  "freshness_policy": {
    "current_source_required": true,
    "living_claims": "Verify against current primary or official sources before reporting tool, API, model, clinical, regulatory, or publication-archive claims.",
    "stale_claim_status": "UNVERIFIABLE"
  },
  "adapters": [
    {
      "name": "preprint.arxiv",
      "domain": [
        "physics",
        "mathematics",
        "computer-science",
        "quantitative-biology",
        "quantitative-finance",
        "statistics",
        "economics"
      ],
      "status": "available-cli",
      "tool": "gather.arxiv",
      "primary_source": "https://info.arxiv.org/help/api/index.html",
      "notes": "Gather already has an arXiv command; expand toward OAI-PMH for bulk metadata if needed."
    },
    {
      "name": "preprint.biorxiv",
      "domain": [
        "biology",
        "life-sciences"
      ],
      "status": "planned",
      "tool": "gather.biorxiv",
      "primary_source": "https://api.biorxiv.org/",
      "notes": "Use bioRxiv API details endpoints, cursor pagination, and source receipts."
    },
    {
      "name": "preprint.medrxiv",
      "domain": [
        "medicine",
        "clinical-research",
        "public-health"
      ],
      "status": "planned",
      "tool": "gather.medrxiv",
      "primary_source": "https://api.medrxiv.org/",
      "notes": "Treat medical preprints as non-peer-reviewed evidence and route clinical claims through Crucible."
    },
    {
      "name": "literature.pubmed",
      "domain": [
        "medicine",
        "biology",
        "clinical-research"
      ],
      "status": "planned",
      "tool": "gather.pubmed",
      "primary_source": "https://www.ncbi.nlm.nih.gov/home/develop/api/",
      "notes": "Use NCBI E-utilities for PubMed, PMC, Gene, Nuccore, Protein, and related Entrez databases."
    },
    {
      "name": "literature.europepmc",
      "domain": [
        "life-sciences",
        "open-access-fulltext",
        "biomedical-literature"
      ],
      "status": "planned",
      "tool": "gather.europepmc",
      "primary_source": "https://europepmc.org/RestfulWebService",
      "notes": "Use Europe PMC Articles API for publications, full text links, and related metadata."
    },
    {
      "name": "literature.openalex",
      "domain": [
        "global-research-index",
        "institutions",
        "authors",
        "works",
        "funders"
      ],
      "status": "planned",
      "tool": "gather.openalex",
      "primary_source": "https://developers.openalex.org/",
      "notes": "Use as a broad open catalog across scholarly works, authors, sources, institutions, and topics."
    },
    {
      "name": "literature.crossref",
      "domain": [
        "doi-metadata",
        "journals",
        "funders",
        "licenses",
        "metadata-provenance"
      ],
      "status": "planned",
      "tool": "gather.crossref",
      "primary_source": "https://www.crossref.org/documentation/retrieve-metadata/rest-api/",
      "notes": "Use DOI metadata, funding, license, update, ORCID, and ROR fields as provenance evidence."
    },
    {
      "name": "literature.semantic-scholar",
      "domain": [
        "papers",
        "authors",
        "citations",
        "venues",
        "embeddings",
        "recommendations"
      ],
      "status": "planned",
      "tool": "gather.semantic_scholar",
      "primary_source": "https://www.semanticscholar.org/product/api",
      "notes": "Use for citation graph, paper discovery, recommendations, and S2AG metadata."
    },
    {
      "name": "trials.clinicaltrials",
      "domain": [
        "clinical-trials",
        "interventions",
        "recruitment",
        "results"
      ],
      "status": "planned",
      "tool": "gather.clinicaltrials",
      "primary_source": "https://clinicaltrials.gov/data-api/api",
      "notes": "Route trial evidence through status, phase, intervention, condition, outcome, and result receipts."
    },
    {
      "name": "pid.datacite",
      "domain": [
        "research-data",
        "datasets",
        "doi-metadata",
        "software",
        "research-objects"
      ],
      "status": "planned",
      "tool": "gather.datacite",
      "primary_source": "https://support.datacite.org/docs/api",
      "notes": "Use DataCite DOI metadata for datasets, software, and other research outputs."
    },
    {
      "name": "pid.orcid",
      "domain": [
        "researchers",
        "works",
        "affiliations",
        "identity"
      ],
      "status": "planned",
      "tool": "gather.orcid",
      "primary_source": "https://info.orcid.org/documentation/integration-and-api-faq/",
      "notes": "Use public/member API boundaries and never treat identity claims as self-validating."
    },
    {
      "name": "pid.ror",
      "domain": [
        "research-organizations",
        "affiliations",
        "institutions"
      ],
      "status": "planned",
      "tool": "gather.ror",
      "primary_source": "https://ror.org/",
      "notes": "Use ROR identifiers to normalize institutions and affiliations across literature graphs."
    },
    {
      "name": "graph.openaire",
      "domain": [
        "open-science-graph",
        "publications",
        "datasets",
        "software",
        "projects",
        "funding"
      ],
      "status": "planned",
      "tool": "gather.openaire",
      "primary_source": "https://graph.openaire.eu/docs/apis/home/",
      "notes": "Use OpenAIRE Graph APIs for cross-object scholarly graph context."
    },
    {
      "name": "structure.alphafold-db",
      "domain": [
        "protein-structure",
        "biology",
        "drug-discovery-context"
      ],
      "status": "planned",
      "tool": "gather.alphafold_db",
      "primary_source": "https://alphafold.ebi.ac.uk/api-docs",
      "notes": "Use AlphaFold Protein Structure Database API for structure records and provenance receipts."
    },
    {
      "name": "structure.alphafold3",
      "domain": [
        "protein-complexes",
        "biomolecular-interactions",
        "structural-biology"
      ],
      "status": "planned-evaluate",
      "tool": "crucible.alphafold_artifact",
      "primary_source": "https://deepmind.google/science/alphafold/",
      "notes": "Treat AlphaFold 3/server/code outputs as model artifacts requiring version, license, input, and confidence provenance."
    },
    {
      "name": "medical.midjourney-medical",
      "domain": [
        "medical-imaging",
        "wellness-imaging",
        "ultrasound",
        "emerging-tools"
      ],
      "status": "watch-only",
      "tool": "gather.midjourney_medical_monitor",
      "primary_source": "https://www.midjourney.com/medical",
      "notes": "Monitor current claims and evidence; do not present diagnostic integration until clinical, regulatory, and API evidence is available."
    },
    {
      "name": "preprint.chemrxiv",
      "domain": [
        "chemistry",
        "materials",
        "biochemistry"
      ],
      "status": "planned-evaluate",
      "tool": "gather.chemrxiv",
      "primary_source": "https://chemrxiv.org/",
      "notes": "ChemRxiv is a chemistry preprint source; verify current API terms before implementing a connector."
    },
    {
      "name": "preprint.osf",
      "domain": [
        "multidisciplinary-preprints",
        "psychology",
        "social-science",
        "open-science"
      ],
      "status": "planned-evaluate",
      "tool": "gather.osf_preprints",
      "primary_source": "https://help.osf.io/article/376-preprints-home-page",
      "notes": "OSF Preprints aggregates community preprint servers; verify current API path before implementation."
    },
    {
      "name": "preprint.ssrn",
      "domain": [
        "social-science",
        "law",
        "economics",
        "medicine",
        "business"
      ],
      "status": "planned-evaluate",
      "tool": "gather.ssrn",
      "primary_source": "https://www.ssrn.com/",
      "notes": "SSRN spans several disciplines; prefer Crossref/OpenAlex metadata where public API access is unclear."
    },
    {
      "name": "preprint.research-square",
      "domain": [
        "multidisciplinary-preprints",
        "author-services"
      ],
      "status": "planned-evaluate",
      "tool": "gather.research_square",
      "primary_source": "https://www.researchsquare.com/request-api",
      "notes": "Research Square provides API access by request; connector should reflect access conditions."
    },
    {
      "name": "oa.unpaywall",
      "domain": [
        "open-access-resolution",
        "doi",
        "license",
        "repository-links"
      ],
      "status": "planned",
      "tool": "gather.unpaywall",
      "primary_source": "https://unpaywall.org/products/api",
      "notes": "Use DOI-based OA lookup to find lawful full-text locations, license fields, and repository or publisher links. Requires source receipts and email/API identity where required by terms."
    },
    {
      "name": "oa.core",
      "domain": [
        "open-access-fulltext",
        "repositories",
        "metadata",
        "pdf"
      ],
      "status": "planned",
      "tool": "gather.core",
      "primary_source": "https://core.ac.uk/documentation/api",
      "notes": "Use CORE for metadata and lawful full-text content from open access journals and repositories; record provider, document id, DOI/title query, and content hash."
    },
    {
      "name": "oa.doaj",
      "domain": [
        "open-access-journals",
        "article-metadata",
        "journal-quality",
        "data-dumps"
      ],
      "status": "planned",
      "tool": "gather.doaj",
      "primary_source": "https://doaj.org/docs/faq/",
      "notes": "Use DOAJ API, OAI-PMH, CSV, or data-dump metadata for open-access journal and article discovery; verify freshness tier before reporting currentness."
    },
    {
      "name": "oa.pubmed-central",
      "domain": [
        "biomedical-fulltext",
        "open-access-subset",
        "pmc",
        "nih"
      ],
      "status": "planned",
      "tool": "gather.pmc",
      "primary_source": "https://www.ncbi.nlm.nih.gov/pmc/tools/",
      "notes": "Use PubMed Central and NCBI utilities for lawful biomedical full text and open-access subset discovery; separate article metadata from clinical claims."
    }
  ],
  "legal_access_policy": {
    "lawful_full_text_required": true,
    "illicit_access_sources_allowed": false,
    "source_leads_allowed": true,
    "source_lead_status": "non_evidentiary",
    "source_lead_policy": "A user-provided Sci-Hub, shadow-library, leaked-PDF, or paywalled-copy reference may be retained only as a research lead. It must be tagged as non-evidentiary, excluded from provenance, and resolved through DOI, title, author, PMID/PMCID, arXiv id, publisher metadata, repository metadata, or other lawful source channels before any claim is promoted.",
    "source_lead_fields": [
      "lead_source_kind",
      "lead_ref_hash",
      "derived_identifiers",
      "lawful_resolution_attempts",
      "resolved_source_ref",
      "evidence_status"
    ],
    "blocked_sources": [
      "sci-hub",
      "shadow-library-fulltext"
    ],
    "blocked_reason": "Research provenance must be lawful, reproducible, citeable, and safe to ship into enterprise workflows.",
    "fallback_when_full_text_unavailable": "Record metadata, abstract, license, lawful access attempt, source lead hash if provided, and mark full_text_status as UNVERIFIABLE."
  }
}