/** * Copyright (c) 2018-2020 mol* contributors, licensed under MIT, See LICENSE file for more info. * * @author Michal Malý * @author Jiří Černý */ import { DnatcoTypes } from './types.js'; import { Column, Table } from '../../mol-data/db.js'; import { Model } from '../../mol-model/structure.js'; import { CustomProperty } from '../../mol-model-props/common/custom-property.js'; import { PropertyWrapper } from '../../mol-model-props/common/wrapper.js'; import { ParamDefinition as PD } from '../../mol-util/param-definition.js'; export type DnatcoSteps = PropertyWrapper; export declare const DnatcoParams: {}; export type DnatcoParams = typeof DnatcoParams; export type DnatcoProps = PD.Values; export declare namespace Dnatco { const Schema: { ndb_struct_ntc_step: { id: Column.Schema.Int; name: Column.Schema.Str; PDB_model_number: Column.Schema.Int; label_entity_id_1: Column.Schema.Int; label_asym_id_1: Column.Schema.Str; label_seq_id_1: Column.Schema.Int; label_comp_id_1: Column.Schema.Str; label_alt_id_1: Column.Schema.Str; label_entity_id_2: Column.Schema.Int; label_asym_id_2: Column.Schema.Str; label_seq_id_2: Column.Schema.Int; label_comp_id_2: Column.Schema.Str; label_alt_id_2: Column.Schema.Str; auth_asym_id_1: Column.Schema.Str; auth_seq_id_1: Column.Schema.Int; auth_asym_id_2: Column.Schema.Str; auth_seq_id_2: Column.Schema.Int; PDB_ins_code_1: Column.Schema.Str; PDB_ins_code_2: Column.Schema.Str; }; ndb_struct_ntc_step_summary: { step_id: Column.Schema.Int; assigned_CANA: Column.Schema.Str; assigned_NtC: Column.Schema.Str; confal_score: Column.Schema.Int; euclidean_distance_NtC_ideal: Column.Schema.Float; cartesian_rmsd_closest_NtC_representative: Column.Schema.Float; closest_CANA: Column.Schema.Str; closest_NtC: Column.Schema.Str; closest_step_golden: Column.Schema.Str; }; }; type Schema = typeof Schema; function getStepsFromCif(model: Model, cifSteps: Table, stepsSummary: StepsSummaryTable): DnatcoTypes.Steps; function fromCif(ctx: CustomProperty.Context, model: Model, props: DnatcoProps): Promise>; function getCifData(model: Model): { steps: Table<{ id: Column.Schema.Int; name: Column.Schema.Str; PDB_model_number: Column.Schema.Int; label_entity_id_1: Column.Schema.Int; label_asym_id_1: Column.Schema.Str; label_seq_id_1: Column.Schema.Int; label_comp_id_1: Column.Schema.Str; label_alt_id_1: Column.Schema.Str; label_entity_id_2: Column.Schema.Int; label_asym_id_2: Column.Schema.Str; label_seq_id_2: Column.Schema.Int; label_comp_id_2: Column.Schema.Str; label_alt_id_2: Column.Schema.Str; auth_asym_id_1: Column.Schema.Str; auth_seq_id_1: Column.Schema.Int; auth_asym_id_2: Column.Schema.Str; auth_seq_id_2: Column.Schema.Int; PDB_ins_code_1: Column.Schema.Str; PDB_ins_code_2: Column.Schema.Str; }>; stepsSummary: Table<{ step_id: Column.Schema.Int; assigned_CANA: Column.Schema.Str; assigned_NtC: Column.Schema.Str; confal_score: Column.Schema.Int; euclidean_distance_NtC_ideal: Column.Schema.Float; cartesian_rmsd_closest_NtC_representative: Column.Schema.Float; closest_CANA: Column.Schema.Str; closest_NtC: Column.Schema.Str; closest_step_golden: Column.Schema.Str; }>; } | undefined; function isApplicable(model?: Model): boolean; } type StepsSummaryTable = Table; export {};