import { Instance, SnapshotIn } from 'mobx-state-tree';
import { MenuItem } from '@jbrowse/core/ui';
import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
import { LinearGenomeViewModel } from '@jbrowse/plugin-linear-genome-view';
import PluginManager from '@jbrowse/core/PluginManager';
export default function stateModelFactory(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
    displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
} & {
    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
    type: import("mobx-state-tree").ISimpleType<"MultilevelLinearView">;
    height: import("mobx-state-tree").IType<number | undefined, number, number>;
    trackSelectorType: import("mobx-state-tree").IType<string | undefined, string, string>;
    linkViews: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
    interactToggled: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
    isDescending: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
    tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
    views: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
        displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
    } & {
        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
        type: import("mobx-state-tree").ISimpleType<"LinearGenomeView">;
        offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
        bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
        displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
            refName: import("mobx-state-tree").ISimpleType<string>;
            start: import("mobx-state-tree").ISimpleType<number>;
            end: import("mobx-state-tree").ISimpleType<number>;
            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
        } & {
            assemblyName: import("mobx-state-tree").ISimpleType<string>;
        }, {
            setRefName(newRefName: string): void;
        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
        tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
        hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
        hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
        hideNoTracksActive: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
        trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<"hierarchical">, [undefined]>;
        trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
        showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
        showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
        showGridlines: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
    }, {
        width: number;
    } & {
        menuItems(): MenuItem[];
    } & {
        setDisplayName(name: string): void;
        setWidth(newWidth: number): void;
    } & {
        volatileWidth: number | undefined;
        minimumBlockWidth: number;
        draggingTrackId: string | undefined;
        volatileError: Error | undefined;
        afterDisplayedRegionsSetCallbacks: Function[];
        scaleFactor: number;
        trackRefs: {
            [key: string]: any;
        };
        coarseDynamicBlocks: import("@jbrowse/core/util/blockTypes").BaseBlock[];
        coarseTotalBp: number;
        leftOffset: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined;
        rightOffset: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined;
        searchResults: BaseResult[] | undefined;
        searchQuery: string | undefined;
        seqDialogDisplayed: boolean;
    } & {
        readonly width: number;
        readonly interRegionPaddingWidth: number;
        readonly assemblyNames: string[];
    } & {
        readonly assemblyErrors: string;
        readonly assembliesInitialized: boolean;
        readonly initialized: boolean;
        readonly hasDisplayedRegions: boolean;
        readonly isSearchDialogDisplayed: boolean;
        readonly scaleBarHeight: number;
        readonly headerHeight: number;
        readonly trackHeights: any;
        readonly trackHeightsWithResizeHandles: any;
        readonly height: any;
        readonly totalBp: number;
        readonly maxBpPerPx: number;
        readonly minBpPerPx: number;
        readonly error: string | Error;
        readonly maxOffset: number;
        readonly minOffset: number;
        readonly displayedRegionsTotalPx: number;
        renderProps(): any;
        searchScope(assemblyName: string): {
            assemblyName: string;
            includeAggregateIndexes: boolean;
            tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
        };
        getTrack(id: string): any;
        rankSearchResults(results: BaseResult[]): BaseResult[];
        rewriteOnClicks(trackType: string, viewMenuActions: MenuItem[]): void;
        readonly trackTypeActions: Map<string, MenuItem[]>;
    } & {
        setShowCytobands(flag: boolean): void;
        setWidth(newWidth: number): void;
        setError(error: Error | undefined): void;
        toggleHeader(): void;
        toggleHeaderOverview(): void;
        toggleNoTracksActive(): void;
        toggleShowGridlines(): void;
        scrollTo(offsetPx: number): number;
        zoomTo(bpPerPx: number): number;
        setOffsets(left?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined, right?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined): void;
        setSearchResults(results?: BaseResult[] | undefined, query?: string | undefined): void;
        setGetSequenceDialogOpen(open: boolean): void;
        setNewView(bpPerPx: number, offsetPx: number): void;
        horizontallyFlip(): void;
        showTrack(trackId: string, initialSnapshot?: {} | undefined, displayInitialSnapshot?: {} | undefined): any;
        hideTrack(trackId: string): number;
    } & {
        moveTrack(movingId: string, targetId: string): void;
        closeView(): void;
        toggleTrack(trackId: string): void;
        setTrackLabels(setting: "overlapping" | "offset" | "hidden"): void;
        toggleCenterLine(): void;
        setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
        activateTrackSelector(): import("@jbrowse/core/util").Widget;
        getSelectedRegions(leftOffset?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined, rightOffset?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined): {
            start: number;
            end: number;
            regionNumber?: number | undefined;
            reversed?: boolean | undefined;
            refName: string;
            assemblyName: string;
            key: string;
            offsetPx: number;
            widthPx: number;
            variant?: string | undefined;
            isLeftEndOfDisplayedRegion?: boolean | undefined;
        }[];
        afterDisplayedRegionsSet(cb: Function): void;
        horizontalScroll(distance: number): number;
        center(): void;
        showAllRegions(): void;
        showAllRegionsInAssembly(assemblyName?: string | undefined): void;
        setDraggingTrackId(idx?: string | undefined): void;
        setScaleFactor(factor: number): void;
    } & {
        slide: (viewWidths: number) => void;
    } & {
        zoom: (targetBpPerPx: number) => void;
    } & {
        readonly canShowCytobands: boolean;
        readonly showCytobands: boolean;
        readonly anyCytobandsExist: boolean;
        readonly cytobandOffset: number;
    } & {
        menuItems(): MenuItem[];
    } & {
        readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
        readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
        readonly roundedDynamicBlocks: {
            start: number;
            end: number;
            regionNumber?: number | undefined;
            reversed?: boolean | undefined;
            refName: string;
            assemblyName: string;
            key: string;
            offsetPx: number;
            widthPx: number;
            variant?: string | undefined;
            isLeftEndOfDisplayedRegion?: boolean | undefined;
        }[];
        readonly visibleLocStrings: string;
        readonly coarseVisibleLocStrings: string;
    } & {
        clearView(): void;
        setCoarseDynamicBlocks(blocks: import("@jbrowse/core/util/blockTypes").BlockSet): void;
        afterAttach(): void;
    } & {
        exportSvg(opts?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").ExportSvgOptions | undefined): Promise<void>;
        moveTo(start?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined, end?: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").BpOffset | undefined): void;
        navToLocString(locString: string, optAssemblyName?: string | undefined): void;
        navTo(query: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").NavLocation): void;
        navToMultiple(locations: import("@jbrowse/plugin-linear-genome-view/dist/LinearGenomeView").NavLocation[]): void;
    } & {
        rubberBandMenuItems(): MenuItem[];
        bpToPx({ refName, coord, regionNumber, }: {
            refName: string;
            coord: number;
            regionNumber?: number | undefined;
        }): {
            index: number;
            offsetPx: number;
        } | undefined;
        centerAt(coord: number, refName: string, regionNumber: number): void;
        pxToBp(px: number): {
            coord: number;
            index: number;
            refName: string;
            oob: boolean;
            assemblyName: string;
            offset: number;
            start: number;
            end: number;
            reversed: boolean;
        };
        readonly centerLineInfo: {
            coord: number;
            index: number;
            refName: string;
            oob: boolean;
            assemblyName: string;
            offset: number;
            start: number;
            end: number;
            reversed: boolean;
        } | undefined;
    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
}, {
    width: number;
} & {
    menuItems(): MenuItem[];
} & {
    setDisplayName(name: string): void;
    setWidth(newWidth: number): void;
} & {
    headerHeight: number;
    width: number;
} & {
    readonly initialized: boolean;
    readonly refNames: any[][];
    readonly assemblyNames: string[];
    readonly numViews: number;
} & {
    setLimitBpPerPx(): void;
    setViews(views: SnapshotIn<LinearGenomeViewModel>[]): void;
} & {
    afterAttach(): void;
    beforeDestroy(): void;
    onSubviewAction(actionName: string, path: string, args?: any[]): void;
    setWidth(newWidth: number): void;
    setHeight(newHeight: number): void;
    insertView(location: number, view: any): void;
    setHeaderHeight(height: number): void;
    setIsDescending(toggle: boolean): void;
    toggleLinkViews(): void;
    alignViews(): void;
    reverseViewsDirection(): void;
    resetZooms(): void;
    clearView(): void;
    removeView(target: any): void;
} & {
    addView(isAbove: boolean, neighbour: any): Promise<void>;
} & {
    menuItems(): MenuItem[];
} & {
    searchScope(assemblyName: string): {
        assemblyName: string;
        includeAggregateIndexes: boolean;
        tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
    };
    rankSearchResults(results: BaseResult[]): BaseResult[];
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
export declare type MultilevelLinearViewStateModel = ReturnType<typeof stateModelFactory>;
export declare type MultilevelLinearViewModel = Instance<MultilevelLinearViewStateModel>;