{ "single": { "query": "EPlGT00140000001539", "response": { "validation": { "valid": true }, "url":"http://devdata.gramene.org/genetrees?idList=EPlGT00140000001539", "obj": [ { "_id": "EPlGT00140000001539", "node_id": 633697, "root_id": 633697, "tree_id": "EPlGT00140000001539", "tree_stable_id": "EPlGT00140000001539", "tree_type": "tree", "distance_to_parent": 0, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 58023, "node_taxon": "Tracheophyta", "left_index": 1, "right_index": 594, "children": [ { "node_id": 6345469, "distance_to_parent": 0.377875, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 88036, "node_taxon": "Selaginella moellendorffii", "left_index": 584, "right_index": 593, "children": [ { "node_id": 633760, "distance_to_parent": 0.007547, "protein_stable_id": "EFJ30124", "gene_stable_id": "SELMODRAFT_90821", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D8RCG3]", "cigar": "1463D21M3D24MD11MD11MD18M16D7M6D6M927D", "sequence": "IIFTGHSLGGAIAALATLWLLYLSRTATAIKLHKLRFVCVTFGMPFVGEVKLSKLAQSQGWDDHFVHVVCRHDIVPRMLLAPLKSTSQRWRVFSSQGK", "taxon_id": 88036, "system_name": "selaginella_moellendorffii", "assembly": "v1.0", "left_index": 591, "right_index": 592, "representative": { "id": "SELMODRAFT_90821", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 1, "end": 84, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345470, "distance_to_parent": 0.02355, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 88036, "node_taxon": "Selaginella moellendorffii", "left_index": 585, "right_index": 590, "children": [ { "node_id": 633721, "distance_to_parent": 0, "protein_stable_id": "EFJ08303", "gene_stable_id": "SELMODRAFT_72950", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D8T4X3]", "cigar": "1463D21M3D24MD11MD11MD10M970D", "sequence": "IIFTGHSLGGAIAALATLWLLYLSRTATAIKLQKLRFVCVTFGMPFVGDVKLSELAQSQGWDDHFVHVVCRHDIVPR", "taxon_id": 88036, "system_name": "selaginella_moellendorffii", "assembly": "v1.0", "left_index": 588, "right_index": 589, "representative": { "id": "SELMODRAFT_72950", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 1, "end": 77, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633775, "distance_to_parent": 0, "protein_stable_id": "EFJ08306", "gene_stable_id": "SELMODRAFT_72949", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D8T4X3]", "cigar": "1463D21M3D24MD11MD11MD10M970D", "sequence": "IIFTGHSLGGAIAALATLWLLYLSRTATAIKLQKLRFVCVTFGMPFVGDVKLSELAQSQGWDDHFVHVVCRHDIVPR", "taxon_id": 88036, "system_name": "selaginella_moellendorffii", "assembly": "v1.0", "left_index": 586, "right_index": 587, "representative": { "id": "SELMODRAFT_72949", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 1, "end": 77, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "SELMODRAFT_72950", "score": 0 } } ], "representative": { "id": "SELMODRAFT_90821", "score": 0.007547 } }, { "node_id": 6345180, "distance_to_parent": 0, "node_type": "duplication", "bootstrap": 12, "duplication_confidence_score": 0.3611, "node_taxon_id": 3398, "node_taxon": "Magnoliophyta", "left_index": 2, "right_index": 583, "children": [ { "node_id": 6345394, "distance_to_parent": 0.268226, "node_type": "speciation", "bootstrap": 97, "node_taxon_id": 3398, "node_taxon": "Magnoliophyta", "left_index": 401, "right_index": 582, "children": [ { "node_id": 633722, "distance_to_parent": 0.363702, "protein_stable_id": "ERM99598", "gene_stable_id": "AMTR_s00088p00147180", "gene_description": "hypothetical protein", "cigar": "974D5M14D6M82D4M168D27M26D10M20D9M9D13M12D16M5DM10D6M25D7M11D2MD21M13D14MD23MD3M4D3M4D4M388D12M3D2MD14MD4M15D3MD11M8D15M2DMDM10D15MD9M43D13M3D2M2DM3DM11D2M3D5M3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D22M4D31M6D6MD13MD7M28D3M8D21M6D30M2D6MD14MD5M6D5MD4M9D2M8D5MDMD3M26D", "sequence": "MADLLITSGLLDQAWIGAQVHSAFSIFNLHTSPSSPPIISFSPPKPTSPHSLSPLPSNTPLSFLNLQTHSDPPLSISINSAALSLFQSIPHDQLLAEATQQHGHGPLLITGQGLGGAVAALFALWALQKGIHVLCITFGCAPIGNEGLARAVESQKPWASRLIHVAGVPRPRAEGLFGEFLLCGRDGYALIEGHEFASRAMDLSNEVDLSHGEEDYGVIIEQLRERVIYRGGEVEGLDEGWSKVRVGLGIQLKEIGIKGGEGRDTLLTAMEKRQEDLNSNLVFHPSKKLNLMKMNMAQLEWYIKQCKDLDMGYYDCYKDWTSRPDRDATKYKTELANYWKEEVEKAQATNVKLRIAILFGGTNFRRMVEPLEIADYYRNGRNRNYVSEGRPHYYAVIEGWLEKGADSERNSKGSLTHDSCFWAHVEEARLRVAEVKLDGSTREEQMAELKAFEDYVMGLIKRCEVSCEIFLQKSSFMSWWKDYEGILKVGYNSPLVTFMKNQDYKKYI", "taxon_id": 13333, "system_name": "amborella_trichopoda", "assembly": "GCA_000471905.1", "left_index": 580, "right_index": 581, "representative": { "id": "AMTR_s00088p00147180", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 74, "end": 165, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345395, "distance_to_parent": 0.222087, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 1437201, "node_taxon": "Pentapetalae", "left_index": 402, "right_index": 579, "children": [ { "node_id": 6345465, "distance_to_parent": 0.091034, "node_type": "duplication", "bootstrap": 78, "duplication_confidence_score": 1, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 561, "right_index": 578, "children": [ { "node_id": 6345466, "distance_to_parent": 0.260865, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 572, "right_index": 577, "children": [ { "node_id": 633800, "distance_to_parent": 0.025583, "protein_stable_id": "Solyc02g069400.2.1", "gene_stable_id": "Solyc02g069400.2", "cigar": "964D15M14D6M82D4M41D7M112D6M2D27M25D14M17D9M9D13M12D15M3D4M10D6M26D5M13DMD21M8D19MD23MD18M377D23M3D2MD21MDM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M16D5M22D19M23D5M3D6M2D17M5D11M2D4M2D12M3D56M7D6MD13MD9M24DM2D2M8D21M2D34M2D6MD14MD5M6D5MD2M9D4M8D5MDMD2M27D", "sequence": "MVSLYNTGLELANLLLGSDLLNQSWEAISKLQKQNLTLLEDPSLPFSVKNQIYESPSKGSIIAFVSSPNCAVNHLKEEFRELISSDQITSFDFLRTRSNTSSISIHKAAFALFASLEKELSLLKQQFTSSQPLIVTGHSLGGSVASLFTLWLLESLPSYGVQHILCITFGSPLLGNNGFQKAMSEHPMWSSCFLHVVSDKDPVPGFLISDHNASAATLTTPTWYMPFGTYLFGSESGFSCFEEPQSILELLMIMSSRCAESENLNNCSQVIDYGHILEQLKNKAICRGISELPDTISNPLQAGTYLLLEATGVGMVQENVNLSYLAMNIAKRAEVQAKHKQKLFDPSKISKTKKSMSYLEWYMKNSLEEAGYYDKYKTRRSRSRDEIASTENLIKHHRTLKLFWKRTVTEVENLPWKEGRTRRKRLLYAATNYRRMVEPLDIAEYYGRGKRNYVLHGRSEHYKLLEKWLTGENTQTYQRSQASSLTVDSCFWAYVEEAMISCQVLKDGQSSSPQDQESARENLIKFEQYVMDMVNNFLVSPEIFLSQSSFMLWWNEYSKVVGNSYTSPLTNFMNDGFRRYA", "taxon_id": 4081, "system_name": "solanum_lycopersicum", "assembly": "GCA_000188115.2", "left_index": 575, "right_index": 576, "representative": { "id": "Solyc02g069400.2", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 92, "end": 210, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633824, "distance_to_parent": 0.011997, "protein_stable_id": "PGSC0003DMT400054651", "gene_stable_id": "PGSC0003DMG400021206", "gene_description": "Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021206]", "cigar": "964D15M14D6M82D4M41D7M112D6M2D27M25D14M17D9M9D13M12D15M3D4M10D6M26D5M13DMD21M8D19MD23MD18M377D23M3D2MD20M2DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M16D5M22D19M23D5M3D6M2D17M5D11M2D4M2D12M3D56M7D6MD13MD9M24DM2D2M8D21M2D6M4D24M2D6MD14MD5M6D5MD2M9D4M8D5MDMD2M27D", "sequence": "MVSLYNTGLELANLLLGSDLLDQSWEAISKLQKQNLTLLEDPSLPFSVKYQIYENPSKGSIIAFVSSPNCAVNHLQQEFRELVSSDQITSFDFLRTRSNTSSISIHKAAFTLFASLENELSLLKQQFTSSQPLIVTGYSLGGSVASLFTLWLLESLPSYGAQQILCITFGSPLLGNNGFQKAMSGHPTWSSCFLHVVSDKDPVPGFLISDHNVSAATLTTPTWYMPFGTYLFGSESGFSCFEEPQSILELMIMSSRCAESENLHNRSQVIDYGHILEQLKNKAICRGISELPDSISNPLQAGTYLLLEATGVGKLQENVNLSYLAMNIAKRAEVQAKHKQNVFDPFKISVTKKSLTNLEWYIKNSLEEGGYYDKYKTRRSRSRDEIESTEDLIKHHRTLKFFWKRTVTEVENLPWKEGKIRRKRLLYAATNYRRMVEPLDIAEYYGRGKKDYVLHGRSEHYKLLEKWLAGENTQTYQRSQASSLTVDSCFWAHVEEAVISCQVLKGSPQDQESAKDNLIKFEQYVMDMINNFLVSPEIFLPQSSFMLWWNEYSKVVGNSYTSPLTNFMNGGFRSYA", "taxon_id": 4113, "system_name": "solanum_tuberosum", "assembly": "3.0", "left_index": 573, "right_index": 574, "representative": { "id": "PGSC0003DMG400021206", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 90, "end": 210, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "PGSC0003DMG400021206", "score": 0.011997 } }, { "node_id": 6345467, "distance_to_parent": 0.17713, "node_type": "duplication", "bootstrap": 14, "duplication_confidence_score": 0.5, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 562, "right_index": 571, "children": [ { "node_id": 633819, "distance_to_parent": 0.029575, "protein_stable_id": "PGSC0003DMT400017886", "gene_stable_id": "PGSC0003DMG400006945", "gene_description": "Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006945]", "cigar": "954D25M14D6M82D4M41D7M121D26M25D14M17D7M11D12M13D15M3D4M10D6M39D6MD21M12D15MD23MD18M377D23M3D2MD17M12D8MD11M8D15M2DMDM3D3M2D4M6D7MD8M15D6M19DM3D13M5D3M3DM11D2M3D2M2DM3D6M2D10MD6M4D12M2D4M2D12M3D57M6D6MD13MD7M21D4MDM2D2M8D21M2D6M3D25M2D6MD20M6D5MD2M9D4M8D5MDMD3M26D", "sequence": "MSNSPKAKMSQVSMFSSGQEFANLLVSSDLLLHSWFTISDLRNHPYLNNPILVKVYPYHSNGAIVAFVSSPTCTLQKEMVSSEDLEGSQSPFDFISTKFNPHFSVNKAAITLFESLLNELSALKEQLGNVSPLIITGVSLGGSVASLFTLWLLKDNNKRPTCITFGSPLLGDSGRQQAISERPSWNSSFLHVVSNHDPILRSLISPTNAFAGSIPQSCIYNPFGMFLLCSDSDCSCFEEPESVLDIMMEMNLNSQHQDNRFLAFDYEQVLELLKHRVIFKGTSQLFHYSVDQLQAGIDLQLEAIGIGGQQSSNMNPLRTEVKQRVKESFDKKKDAFDPGKKLNKMKEAMAWLEWYKKVTLKEGGYYDSFKRSEYRGRDAVKSRQEIVKHQRILTRYWKTMVAEVEKMPQREETAFRTRWLYAGTNYRRMVEPLDIAEYYMKSGNTDYVNLGRSEHYKKLEEWRKEDNPSGSGNYRRKSVSLTEDSCFWAYVEEAIINSKRLREGSLEEKENAMAYLVKFGGNVMTMIWSYSVSSEIFQPQSSFMNWWQEYRQDILRCLSNFPLANYMDNEVYRSYA", "taxon_id": 4113, "system_name": "solanum_tuberosum", "assembly": "3.0", "left_index": 569, "right_index": 570, "representative": { "id": "PGSC0003DMG400006945", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 84, "end": 206, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345468, "distance_to_parent": 0.001805, "node_type": "speciation", "bootstrap": 14, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 563, "right_index": 568, "children": [ { "node_id": 633731, "distance_to_parent": 0.06814, "protein_stable_id": "PGSC0003DMT400089805", "gene_stable_id": "PGSC0003DMG400039376", "gene_description": "Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400039376]", "cigar": "2172D17M5D11M2D4M2D12M3D57M6D6MD13MD7M21D4MDM2D2M8D9M149D", "sequence": "MKVAMAWLEWYMKVTLNEGGYYDSYKRSDFRGRDAVKSRQEIVKYQRVLNKYWKAKVAEVEEMPQSEKAAFRTRWLYSGTNYRRMVEPLDIAEYYMKSGNTDYVNLGRSEHYKKLEEWRKEDNPSGSGNDRRKAVSLTEDSCF", "taxon_id": 4113, "system_name": "solanum_tuberosum", "assembly": "3.0", "left_index": 566, "right_index": 567, "representative": { "id": "PGSC0003DMG400039376", "score": 0 }, "domains": [] }, { "node_id": 633806, "distance_to_parent": 0.01991, "protein_stable_id": "Solyc02g067660.2.1", "gene_stable_id": "Solyc02g067660.2", "cigar": "962D17M14D6M82D4M41D7M121D26M25D14M17D7M11D12M13D15M3D4M10D6M39D6MD21M12D15MD23MD18M377D23M3D2MD17M12D8MD11M8D15M2DMDM3D3M2D4M6D7MD8M16D5M19DM3D13M5D3M3DM11D2M3D2M2DM3D6M2D10MD6M4D12M2D4M2D12M3D57M6D6MD13MD7M21D4MDM2D2M8D21M2D6M3D25M2D6MD20M6D5MD2M9D4M8D5MDMD3M26D", "sequence": "MSQVSLFSSGQELANLFLSSDLLHHSWITISALSSHPYINKPILFKVYPYHSNGAIVAFVSSPTCNLQKEMVSSEELQGSQSPFDFISTKLNPHFSVNKAAITLFASLLNDLSALKEQLDSFSPLIITGVSLGGSVASLFTLWLLKDSNKRPTCITFGSPLLGDSGLQQAISERPSWNSSFLHVVSNQDPIPRSLISPTNVFAGSIPQPCIYMPFGMFLLCSDSDCSCFEEPESVLDLMTEMNLNSQHQDNHSLAFDYEQVLERLKHRVILKGASQLFQFSVDQLQAGIDLQLEAIGIGGQTSNMNSIRTKVKKRVEESFAKKRNAFDPGKKLNKMKEAMTWLEWYKKVTLKEGGYYDSYKRSEYRGRDAVKSRQEIVKHQRVLTKYWKTMVAEAEKMPQREEAVFRTRWLYAGTNYRRMVEPLDIAAYYMKPGNTDYVNLGRSEHYKKLEEWRREDNPSGSGNDRRKCVSLTEDSCFWAYVEEAIINSKRLREGSLQEKENAREYLVNFGGYVMNMIRSYSVSSDIFQLHSSFMNWWQEYRQDILSCLSNLPLAFYMENGEYKSYA", "taxon_id": 4081, "system_name": "solanum_lycopersicum", "assembly": "GCA_000188115.2", "left_index": 564, "right_index": 565, "representative": { "id": "Solyc02g067660.2", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 88, "end": 217, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Solyc02g067660.2", "score": 0.01991 } } ], "representative": { "id": "Solyc02g067660.2", "score": 0.021715 } } ], "representative": { "id": "Solyc02g067660.2", "score": 0.198845 } }, { "node_id": 6345396, "distance_to_parent": 0.001871, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 403, "right_index": 560, "children": [ { "node_id": 6345398, "distance_to_parent": 0.362379, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 3700, "node_taxon": "Brassicaceae", "left_index": 518, "right_index": 559, "children": [ { "node_id": 6345414, "distance_to_parent": 0.076588, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3701, "node_taxon": "Arabidopsis", "left_index": 553, "right_index": 558, "children": [ { "node_id": 633772, "distance_to_parent": 0.044115, "protein_stable_id": "AT5G14930.2", "gene_stable_id": "AT5G14930", "gene_display_label": "SAG101", "gene_description": "Senescence-associated carboxylesterase 101 [Source:UniProtKB/Swiss-Prot;Acc:Q4F883]", "cigar": "963D16M14D6M82D4M41D7M107D11M2D27M25D11M20D10M8D12M13D15M3D4M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD8M8D2M385D15M3D2MD14M6DMDM5D3M9D9M7D16M2DMDM29DM48D11M6DM2DM3DM12DM3D2MD2M3D6M2D10MD6M2DMD12MD4MD3M6D64M7D6MD13MD9MD5M18DM2D2M8D21M2D34M2D6MD14MD5M7D4MD2M9D4M8D5MDMD6M23D", "sequence": "MESSSSLKGSALGKLVVTSGLLHSSWSKILEIHNPPYSNHDPGLQVSKKKKDSGLEFQIHREEKFTLVVFSAPPICRSSSSDSTLLHVKDKENPFPFLCSENNPSFSLHTPAFNLFTSASTSLTYLKSELLQTLKSEKPVIITGAALGGSVASLYTLWLLETIEPTLKRPLCITFGSPLIGDASLQQILENSVRNSCFLHVVSAQTRIKMDFFKPFGTFLICFDSGCVCIEDHVAVTELLNGVHDSGLVDYSQVLNRLDQSMLSLADSRLIPEDVIKGIEKRAEMKNLRFDMMFKKLNDMKISMAYIEWYKKKCKEVKIGYYDRFKTQLAFPSKEFDINIKNHHKSELNRFWKSVVEEVERRPQSDASILKRRFLFSGNNYRRMIEPLDIAEYYLEGRKEYRTTGRSHHYVMLEKWFGMESILIEKERCKKRDLSDLLTFDSCFWAEVEDSLIVINQLNTTVGMRDDVREVLTRKLVEFEGYVWEIITKREVSPEIFLEESSFMKWWKEYKKIKGFNSSYLTEFMNTRKYESYGKSQ", "taxon_id": 3702, "system_name": "arabidopsis_thaliana", "assembly": "TAIR10", "left_index": 556, "right_index": 557, "representative": { "id": "AT5G14930", "score": -175 }, "domains": [ { "interpro": "IPR029058", "start": 106, "end": 212, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633840, "distance_to_parent": 0.033093, "protein_stable_id": "fgenesh2_kg.6__1471__AT5G14930.2", "gene_stable_id": "fgenesh2_kg.6__1471__AT5G14930.2", "gene_display_label": "SAG101", "gene_description": "Senescence-associated gene 101 [Source:UniProtKB/TrEMBL;Acc:D7M6P3]", "cigar": "961D18M14D6M82D4M41D7M120D27M25D11M20D9M9D12M13D15M3D4M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD10M5D3M387D13M3D2MD14M6DMDM5D3M9D9M7D16M2DMDM29DM48D11M6DM2DM2D2M12DM3D2M6D6M2D10MD6M2DMD12MD4MD3M6D7MD56M7D6MD13MD9MDM2D2M18DM2D2M8D21M2D34M2D6MD14MD5M5D6MD2M9D4M8D5MDMD6M23D", "sequence": "MESSSSSSLKCSALGKLVLSSGLLHSSWSKISEIHKSPYSNQDSGLGIKIYREEKFTLVVFVAPPIFTSSSDSTLLPGKENENPFPFLCSEINPSFSLHTPALNLFTSAYKSLTNLQSELLQTLKSEKPVIITGASLGGSVASLYTLWLLDTIDPKLKRPLCITFGSPLIGDVSLQEILENSVRNSCFLHVVAAAQTRFKSDFFKPFGTFLICFDSGCVCIEDPEAVTELLNGVHDSEQVDYGQVLRRLDQSMLSIADSTFVPEAVIKGMEKRAEMKDLRFDMFKKLNDMKISMAYIEWYKKECRKVKIGYYDRFKTQHAFPSSEFDIKIKNHKLELNRYWRSVVEEVEKKPQSDISILKRRFLYSGNNYRRMIEPLDIAEYYLEGGKEYRTSGRSRQYVMLEKWFGMELIEKERRQNRDLSDLLTFDSCFWAEVEDSMIVINQLNTTVGMSDDAREALTRKLVKFKEYVWEMIRKREVSPEIFLEKSSFMKWWKEYKKIKGSNSPPSYFTEYMNTGKYESYGKPQ", "taxon_id": 81972, "system_name": "arabidopsis_lyrata", "assembly": "v.1.0", "left_index": 554, "right_index": 555, "representative": { "id": "fgenesh2_kg.6__1471__AT5G14930.2", "score": -150 }, "domains": [ { "interpro": "IPR029058", "start": 96, "end": 197, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "AT5G14930", "score": -174.955885 } }, { "node_id": 6345399, "distance_to_parent": 0.038814, "node_type": "duplication", "bootstrap": 0, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 519, "right_index": 552, "children": [ { "node_id": 6345411, "distance_to_parent": 0.072451, "node_type": "duplication", "bootstrap": 0, "duplication_confidence_score": 0.5, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 542, "right_index": 551, "children": [ { "node_id": 633743, "distance_to_parent": 0.329799, "protein_stable_id": "Bo9g165530.1", "gene_stable_id": "Bo9g165530", "cigar": "964D15M14D6M82D4M41D7M120D27M25D14M17D11M7D12M13D22M10D6M25D5M13D2MD21M9D18MD11MD11MD7M8D3M385D15M3D2MD14M6DMDM5D3M6DMD10M8DM148D4M8D4M3D4M2D14M4DMD3M6D5M3D32M31D6MD3M44DM2D2M8D21M2D27M10D5M93D", "sequence": "MDSYSLNCTELGKLVLSSGLLSTSWSKISEMHESSHQPKDSALEFNVYRETTFVFVVFSAPPVCGDASLNSGSTLVSDVTSQDANLFSFLCSKKTPSFSLHTHALQLFASAVTENNRLIDLKSELLEFKKPVIITGAALGGSIASLFTLWLLEKVEPKLKRPLCITFGSPFIGDAKLQQILENSVRNSCFLHVADATQTPTTEGFKPFGTYLICNGSGCDCIDDPKAVMGLLLGGGTDLQGWRDYGEVLKSLDRYLQWRMCLNRKQFANGNQHRNQMEDEHQKELIDQRLYYMYDYKCKRAECKFVPDNKQVQFNLVPYRTIANPKSRVEIVCAEQVYGLYVRQTVMMLRNILACADCTASNKLVAEGRLSKHEDMMMAAAC", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 549, "right_index": 550, "representative": { "id": "Bo9g165530", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 98, "end": 231, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345412, "distance_to_parent": 0.023448, "node_type": "speciation", "bootstrap": 89, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 543, "right_index": 548, "children": [ { "node_id": 633845, "distance_to_parent": 0.212148, "protein_stable_id": "Bo9g165520.1", "gene_stable_id": "Bo9g165520", "cigar": "1412D5M88D6M3D4M20D5M423D8M6DMDM5D3M5D2MD10M107D10M6DM2DM2D2M12DM3D2M2DM3D6M2D10MD6M2DMD12M7D2M6D5M3D40M12D4M7D6MD3M44DM2D2M8D21M2D6M6D22M2D6MD14MD5M2D9MD2M9D4M8D5MDMD11M18D", "sequence": "MTQDDATFGAPGEEPTPTPAAARFDLKTDVNPPPTDARPTIGDVIIKGMKKRAEKKKNQRFDQLKKLDEVKISMAYMEWYKKKSKKGKIVYYDQFKNQPAFVYEIRRKGMNDYWETMVQEVEKMPQGEASYLKKRCLLSGNNYRREGNSKETLRGKETDLSELLTFDSCFWSEVEEALIAINELKTQPEEGLFEKLVKYEEYVWEMIRKREVSPEIFLERSSFMTWWKEYKDIKGKRDGFSSSPEFTEFMNTGKYKSYGKPESDSAA", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 546, "right_index": 547, "representative": { "id": "Bo9g165520", "score": 0 }, "domains": [] }, { "node_id": 633771, "distance_to_parent": 0.032232, "protein_stable_id": "Bra008729.1-P", "gene_stable_id": "Bra008729", "gene_description": "AT5G14930 (E=6e-158) SAG101 | SAG101 (SENESCENCE-ASSOCIATED GENE 101); carboxylesterase/ triacylglycerol lipase ", "cigar": "964D15M14D6M82D4M41D7M120D27M25D14M17D11M7D12M13D22M10D6M25D5M13D2MD21M9D18MD11MD11MD7M2DM5D3M385D15M3D2MD14M6DMDM5D3M6DMD10M8D15M2DMDM29DM48D11M6DM2DM3DM12DM3D2M2DM3D6M2D10MD6M2D14M7D2M6D5M3D56M7D6MD13MD9MDM2D3M17DM2D2M8D21M2D6M6D22M2D6MD14MD5M2D9MD2M9D4M8D5MDMD11M18D", "sequence": "MDSYSQNCTETGKLVLSSGLLNTSWSKISEMHESSHQPKDSALEFNVYRETTFVFVVFSAPPVCGDASLNSGSTLVSDVTSQDANLFSFLCSEKTPSFSLHTHALQLFASAVTENNRLTDLKTKLLESTKPVIITGTALGGSLASLFTLWLLESIKPNLKRPLCITFGSPFIGDANLQQILENSLRNSCFLHVADATQTPIITKGFEPFGTYLICNESACVCIDDPKAVTELLLGGNTDPAGGRDYGEVLKSLDRSSTADARLMIGDVIINGMKKRAEEKKQRFDQLKKLDNIKISMAHIEWYKKLSKKGHKTVYYDHFKTQIVFPYETLRTEMNDYWESMVQEVEKMPQSEKSNLKTRCLYSGNNYRRLMEPLYIAKYYLEGKKEYRTRGRPHHYVMLEKWFKQAQLKEPLRGNGTDLSELLTFDSCFWSEVEEALIAINELKTQPAEGLVGKLMKFEEYVWETIRKREVSPEIFLERSSFMTWWKEYKEIKGTRDGFSSSPEFTEFMNSGKYKSYGKPESDLAA", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 544, "right_index": 545, "representative": { "id": "Bra008729", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 98, "end": 209, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra008729", "score": 0.032232 } } ], "representative": { "id": "Bra008729", "score": 0.05567999999999999 } }, { "node_id": 6345401, "distance_to_parent": 0.040432, "node_type": "duplication", "bootstrap": 99, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 520, "right_index": 541, "children": [ { "node_id": 6345402, "distance_to_parent": 0.062219, "node_type": "speciation", "bootstrap": 70, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 531, "right_index": 540, "children": [ { "node_id": 633789, "distance_to_parent": 0.091552, "protein_stable_id": "Bra006274.1-P", "gene_stable_id": "Bra006274", "gene_description": "AT5G14930 (E=1e-133) SAG101 | SAG101 (SENESCENCE-ASSOCIATED GENE 101); carboxylesterase/ triacylglycerol lipase ", "cigar": "963D16M14D6M82D4M41D7M127D20M26D11M19D9M9D12M13D15M3D4M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD7MDM6D2M386D15M3D2MD14M6DMDM5D3M10D8M8D15M2DMDM29D2M46D11M10DM3DM12D2M2D2M6D6M2D10MD6M2DMD16M2D4M5D5M3D56M7D6MD13MD9MDM2D2M18DM2D2M8D21M14D22M2D6MD14MD5M5D6MD2M9D4M8D5MDMD6M23D", "sequence": "MASSTLRKSVEQGTFVSKSGLLGMVWSKITTLGFQVSDIKAYEEGIYTIVVFAAPSCRLDSAASTLMSGSEDQNPFHFLCSEKNPSFSFHTPAYQLFDSARKDLIHFKSELIELLKSKKQVIITGAALGGSVASLFTLWLTEKVEPKFKRPLCITFGSAFIGDDKLQQILEDSWRNSCFLHVADAAQTPVNKYFKPFGTFLIWVGSQCVCIDDPVTVTELLGGANADVVDYGEVPGRLAQPVVVDSTLTIDDGVFSRMAERAENKKRRFDRLQKLIDMKINMIYFEWDKKKSKKLKMGFYDWYRTMESCPSQDKVDAQKRKTELNEYWKELVEEVKKMPQSEKALFKTRSLLAANNYRRMVEPLDIAEYYLSGKTDYQTTGRSPHYAVLEKLFKAENINPDRPKNSDLSDLLTFDSCFWAKVEDAMILTKTQVVSRELMTFEEDVWEMIRKREVSPEIFLEGSSFMKWWREYKEIRAVHSPPSYFTEFMINGEYKTYGQAC", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 538, "right_index": 539, "representative": { "id": "Bra006274", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 86, "end": 182, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345403, "distance_to_parent": 0.009995, "node_type": "duplication", "bootstrap": 70, "duplication_confidence_score": 1, "node_taxon_id": 109376, "node_taxon": "Brassica oleracea var. oleracea", "left_index": 532, "right_index": 537, "children": [ { "node_id": 633764, "distance_to_parent": 0.074853, "protein_stable_id": "Bo3g010010.1", "gene_stable_id": "Bo3g010010", "cigar": "964D15M14D6M82D4M41D7M124D23M25D11M20D9M9D12M13D15M2D5M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD9M6D2M386D15M3D2MD14M6DMDM5D3M6DMD10M8D15M2DMDM29D2M46D12M13DM12D6M8D4M2D10MD6M2DMD12M6D3M7D4M3D56M7D5M2D13MD9MDM2D7M13DM2D2M8D29M4D24M2D6MD14MD5M5D6MD2M9D4M8D5MDMD9M20D", "sequence": "MDSSSLKCLELGKLVSNSGVLDKAWSKISAAHGNQVSGLEFKPYHEGIYTIVVFVAPSFPFDSAASTPLSGPEGQNPFHFLRSENIFSFSLHKPAYQLFVSANKNNLTELKLELLGLLKSKKHVIITGAALGGSVASLFTLWLLESVEPNFKRPLCITFGSPLLGDASLQQILENSLWNSCFLHVVADAAQTPVNTNFKPFGTFLIWVGSQCVCIDDPVTVTELLGGANADEIVWRDYSEVLGRLVQPVAVETRLMVDDGVFNRMAERAENKKPRFDPLIKLNDMKIHMIYFEWYKKICKKMKIGYYDHFKTQLVFSYENRRRELNDYWKELVEEVEKTPQSEKSLLKTRSLLSGHNYRRMIEPLDIATYYRDGGKEYRNSRPRHYVTLEKWFKAGVEDEKIPSPARPPGSDLSDLLTFDSCFWADVQEAMRVTDALALKTQVVGREELLEKLMRFEEYVGEMLKKREVSPEIFLEGSSFMKWWREYKEIRALHSPPSYFTQFMIQRKYESYGKPADKE", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 535, "right_index": 536, "representative": { "id": "Bo3g010010", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 90, "end": 293, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633758, "distance_to_parent": 0.07408, "protein_stable_id": "Bo3g009990.1", "gene_stable_id": "Bo3g009990", "cigar": "964D15M14D6M82D4M41D7M120D27M25D14M17D9M9D12M13D15M3D4M10D6M25D5M13D2MD21M9D18MD11MD11MD9M7DM386D15M3D2MD14M6DMDM5D3M6DMD10M8D15M2DMDM29D2M46D12M13DM12D6M8D4M2D10MD6M6D10M2D7M7D63M7D6MD13MD9MDM2D2M18DM2D2M8D21M2D6M4D24M2D6MD14MD5M5D6MD2M9D4M8D5MDMD9M20D", "sequence": "MDSSSLKCLEFGKLVLKSDLLPNSWSKISEVYESTNRNQDSSLKIKIYPETKYTIVVFDAPLLRTNYPSDSASTTLSGTPDQNPFHFLYLEKIPSFSIHAPAYQLFDSAKNDLIHLKSELLKSKKQVILTGAALGGSVASLFTLWLVDTVDPKLRRPLCIAFGSPLIGDASLQQILENSLRNSCFLHVADAAQTLLTQAFKPFGTFLICFDSQCICIDDPETVTELLGGANTDEVVWRDYSEVLGRLVQPLAVETRLIVDDGIINRMADRAANKKLRFDPLIKLNHMKIEMMHLEKYKKKSTMGYYDRFKTNMKSPDSIVDVVTEKRKKELNDYWISLVKEVEKMPQSEKSLLKTRSLFAGHNYRRLVEPLDIAEYYLRGKREYRTTGRSRHYEMLEKWFKAENIKPTRWEGRDLSDLLTFDSCFWADVEEAMLVNNALRTQLVGREVLFEKLMKFEEYVWKMIEKREVSPEIFLEGSSFMKWWKEYKEIKGLHAPPTHFTEFMNNNKHESYGKPADKE", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 533, "right_index": 534, "representative": { "id": "Bo3g009990", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 95, "end": 199, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bo3g009990", "score": 0.07408 } } ], "representative": { "id": "Bo3g009990", "score": 0.084075 } }, { "node_id": 6345405, "distance_to_parent": 0.014289, "node_type": "duplication", "bootstrap": 99, "duplication_confidence_score": 0.5, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 521, "right_index": 530, "children": [ { "node_id": 633801, "distance_to_parent": 0.082697, "protein_stable_id": "Bo3g009980.1", "gene_stable_id": "Bo3g009980", "cigar": "978DM14D6M82D4M41D4M127D23M25D14M17D9M9D12M13D15M2D5M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD7MDM6D2M386D15M3D2MD14M6DMDM5D3M6D12M8D15M2DMDM29DM48D11M6DM2DM3DM12DM3D2M2DM3D6M2D10MD6M2DMD16M2D5M4D5M3D56M7D6MD13MD9MDM2D2M18DM2D2M8D21M2D6M4D24M2D6MD14MD5M5D6MD2M9D4M8D5MDMD6M23D", "sequence": "MDSSSLISEVYESTHQNQDSGLQIKIYQEAIHTVVVFVAPSIRKNTPLNSASTLLSGPQDQNPFHFLCSEKISSFSIHTPTNQLFNSAYKNDLIQLKSELLGLLKSKKHVIITGSAIGGSVASLFTLWLLETVEPKLKRPLCITFGSPLIGDASLQQILENSLRSSCFLHVADATQTPITQGFKPFGTFLICFDSEYICIDDPDAVTELLGSTAHTDILSWRDYGRVLDRLTQQEAGDSKLMIDEDVISRMAERAEKTKQRFDQLKKLNEIKISMIFLEWYKKKSKMEKTGYYDRFKTHVACPVSPFDMDIEKRKRELNDYWISLVEEVEKKPQSRKALLKTRSLYSGNNYKRMVEPLDIAEYYLSGRTGYRASGRARHYDVLEKWFKAEGLEPARCEKRDLSDLLTFDSCFWSEVEEAMLVINTMKTKVVGRDVLMEKLVRFEEYVWDMIRKREVSPEIFLEGSSFMKWWREYKEIRGFSSSRSDFTEFMNNRMYESYGQAC", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 528, "right_index": 529, "representative": { "id": "Bo3g009980", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 79, "end": 192, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345407, "distance_to_parent": 0.066924, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 522, "right_index": 527, "children": [ { "node_id": 633812, "distance_to_parent": 0.013637, "protein_stable_id": "Bo9g165540.1", "gene_stable_id": "Bo9g165540", "cigar": "964D15M14D6M82D4M41D7M117DM2D27M25D14M17D9M9D11M14D15M2D5M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD7MDM6D2M386D15M3D2MD14M6DMDM5D3M6D12M8D15M2DMDM78D11M6DM2DM3DM12DM2D3M6D6M2D10MD6M2DMD16M2D5M4D5M3D56M7D6MD13MD9MDM2D2M18DM2D2M8D21M2D6M4D24M2D6MD14MD5M5DMD4MD2M9D4M8D5MDMD6M23D", "sequence": "MDFSSLKGFELGKLVLSSGLLHISWNKISELRASRAHQVQTPGLGIKIFQETKYTVVVFVAPPINLSCPLNSASTILSGTKDQNPFHFLCSEKISSSLHTPAFQLFVSAYNNNLLHLKSKLLHLLESKEHVIITGAALGGSVASLFTLWLLETVEPTLKRPLCITFGSPLIGDAKLQEILENSLRNSCFLHVAYASQTPINTDFKPFGTFLICFDSECISIDDPEAVMELLGGTNTDQVVGLIDYGKVLDRLDQTVMEDSRLMIDDVISRMDERAEKKKLRYDQLKKLNDIKISMIYIEWYKKKSKKEKTGYYDRFKTHLASSVSPFDIDIEKRKREVNDYWRSLVEEVEKKPQSEKSLLKTRSLFSGNNYRRMVEPLDIAEYYHNGGREYRASGRSRHYVMLEKWFKEEKIEPVRCVKRDLSDFLTFDSCFWSEVEEALIVSKCLQTQEGEREVLLRKLVRFEEYVWEMIRKREVSPEIFLEKSSFMKWWKEYKEIIKGFHSSHFTKFMNDRMYESYGQAC", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 525, "right_index": 526, "representative": { "id": "Bo9g165540", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 102, "end": 202, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633765, "distance_to_parent": 0.010005, "protein_stable_id": "Bra008731.1-P", "gene_stable_id": "Bra008731", "gene_description": "AT5G14930 (E=1e-171) SAG101 | SAG101 (SENESCENCE-ASSOCIATED GENE 101); carboxylesterase/ triacylglycerol lipase ", "cigar": "782D197M14D6M82D4M41D7M117DM2D27M25D14M17D9M9D12M13D15M2D5M10D6M25D7M5DM5D2MD21M9D18MD11MD11MD7MDM6D2M386D15M3D2MD14M6DMDM5D3M6D12M8D15M2DMDM78D11M6DM2DM3DM12DM2D3M6D6M2D10MD6M2DMD16M2D5M4D5M3D56M7D6MD13MD9MDM2D2M18DM2D2M8D21M2D6M4D24M2D6MD14MD5M5DMD4MD2M9D4M8D5MDMD13M16D", "sequence": "MALSLLSVFVFLQVFTNIVFAASNEESKISVPPSPSYKPSPPLVKPPTLPTTPIKPPTTTPPVKSPATPVSPTKPPVKSYPPQVKPPTSPLVKPPTYKPPTPTVKPPTKPPVQPPTYKPPTPLVKPPTIPPVKPPTAPVKPTPTTPVTTPPPVKPPVNPIPSPPVNAPPVKPPTPPAKPPTPPPVRTRKGFELGKLVLSSGLLHRSWNKISELRASRAHQVQTPGLGIKIFQETKYTVVVFVAPPINITCPLNSASTLLSGTQDQNPYHFLCSEKISSFSLHTPAFQLFVSAYNNNLLHLKSKLLDLLESKEHVIITGAALGGSVASLFTLWLLETVEPTLKRPLCITFGSPLIGDAKLQQILENSLRNSCFLHVAYASQTPINTDFKPFGTFLICFDSECISIDDPEAVMELLGGTNTDQVVGLIDYGEVLDRLDQTVMEDSRLRIDDVITRMEERAEKKKLRYDQLKKLNDIKISMIYIEWYKKKSKMEKTGYYDRFKTHLASSVSPFDIDIEKRKKEVNDYWRSLVEEVEKKPQSEKSLLKTRSLFSGNNYRRMVEPLDIAEYYHNGGREYITSGRSRHYVMLEKWFKEEKIEPVRCVKRDLSDLLTFDSCFWSEVEEALMVIKSLKRQDGEREVLLRKLVRFEEYVWEMIRKREVSPEIFLEKSSFMKWWKEYKEIIKGFDSSDFTKFMNTRMYESYGQACGRLMINI", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 523, "right_index": 524, "representative": { "id": "Bra008731", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 285, "end": 385, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra008731", "score": 0.010005 } } ], "representative": { "id": "Bra008731", "score": 0.076929 } } ], "representative": { "id": "Bra008731", "score": 0.091218 } } ], "representative": { "id": "Bra008729", "score": 0.128131 } } ], "representative": { "id": "AT5G14930", "score": -174.879297 } }, { "node_id": 6345415, "distance_to_parent": 0.010992, "node_type": "dubious", "bootstrap": 1, "duplication_confidence_score": 0, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 404, "right_index": 517, "children": [ { "node_id": 6345417, "distance_to_parent": 0.056112, "node_type": "speciation", "bootstrap": 88, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 495, "right_index": 516, "children": [ { "node_id": 633708, "distance_to_parent": 0.17511, "protein_stable_id": "EOY02293", "gene_stable_id": "TCM_016815", "gene_description": "Senescence-associated gene 101, putative isoform 2", "cigar": "964D15M14D6M82D4M41D7M114D4M2D27M25D12M19D13M5D11M14D15M3D4M10D6M38D7MD21M8D43MD18M376D24M3D2MD17M12D5M2D13M8D15M2DMDM3D3M2D4M6D7MD8M11DM2D7M19DM3D14M2D4M16D2M3D5M3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D25M2D29M7D6MD13MD9MDM2DM14D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M6D5MD2M9D4M8D5MDMD13M16D", "sequence": "MNQLFSSGSEVASFVVSSGLLKLSWAKNLDCYGGVNLNEQHALGFSLRYKAYQEAKFNIIAFVTSPICTKSHLQEAELVSSTALRETFPFVEFLCSNGNSFSIHKAAITLFAAHMNELLQLKNQCGSSSKPLIITGHSLGGSVASLFTLWLLESLDVSAATRPLCLTFGSPALVGDKGFQQSISEHPVWTSCFLHVATSKDSIPRLFIPPHNLHTMGLTSQPYIYKPFGTFLLCFDMGCTCSDNPEAISELLVAMGMGGTRNEEQLVVDYGKIVEQLESWIIFEGISQFSDFMPNSLRAGTILQLEAIGLQKRQQQQQQNNDFDKLIEKLEKLEESCMLNKRKVFDPAKKLNDIKIKMALLEWYKKVSKAEEIGYYDCYKNQLSQRDRDIVRLKKFLTNYWKEFVAQTEKKPQKEGVRTRWLYAGTNYRRMIEPLDIAEYYKTGQKNYINNGRSDHYKKMEQWLEEAEKQSGFSINSKKQNVDVILTYDSCFWARVEEARICCRTLENADASITDRGSSRQNLMKFELYVMEQIKKSAVSSEIFLKDSSFMQWWKEYEKIIEPHHNLPLTDFMKNCKYHQYGSGCLALNWKI", "taxon_id": 3641, "system_name": "theobroma_cacao", "assembly": "GCA_000403535.1", "left_index": 514, "right_index": 515, "representative": { "id": "TCM_016815", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 100, "end": 227, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345418, "distance_to_parent": 0.103115, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 496, "right_index": 513, "children": [ { "node_id": 6345421, "distance_to_parent": 0.09985, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 503, "right_index": 512, "children": [ { "node_id": 633822, "distance_to_parent": 0.115836, "protein_stable_id": "POPTR_0009s08950.1", "gene_stable_id": "POPTR_0009s08950", "cigar": "971D8M15D5M82D4M269D8M17D15M3DM63DMD21M6D21MD23MD14M385D19M3D2MD17M12D5M2DMD11M8D15M2DMDM3D3M2D4M6D7MD8M5D4M28D7M6D8M2D2M2DM3DM9D4M3D5M3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D57M6D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M6D5MD2M9D4M8D5MDMD7M22D", "sequence": "MFEPCDCSYDGHWRLTWSLTSGLVGLVEIHDSTTEELLVNSRLIVTGHSLGGTIASLFTLWLLDNIKKTTRRNQLPFCITFGSPLIGDQGLQRAISEHSQWNSCFLHVAAFKDLSPGIFITSQPNPQYMPFGTYFFCSELGCNCVEDPEVVSWLLKSTITPVSAEEMGIDDYSGIVKHLKSRLIMKDNSQLGQPVTPSLRPEMILQLKAIGFEITAQQQQNNIINDLISEWERHENRKAQQMKAIDPNEKLNIVKIRMANLEWYKKDCKAKGVGYYDSYKNLYFTRDGEVTKHKKVLFDYWKKFVEDLERKPQKEGAFMRETWLFAGTNYRRMVEPLDIAQYYRQTGKRDYLTYGRSRHYILLEQWQKEQTEKLAGPPNDKKKQSVAGILTEDSCFWMNVEEALISCKLLKDETSSTSEKQSAREFLNTFEQYVMDQLNNYAVSPEIFLEKSSFTKWWKDFQEIIETSHNSPLTDFMKNRTYRQYERGQF", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 510, "right_index": 511, "representative": { "id": "POPTR_0009s08950", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 40, "end": 133, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345424, "distance_to_parent": 0.174065, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 504, "right_index": 509, "children": [ { "node_id": 633814, "distance_to_parent": 0.011496, "protein_stable_id": "POPTR_0001s29790.1", "gene_stable_id": "POPTR_0001s29790", "gene_display_label": "XM_002333135.1", "gene_description": "predicted protein, mRNA [source:RefSeq DNA_predicted;Acc:XM_002333135.1]", "cigar": "1357D8M14D15M98D19MD11M417D14M3D4M150D17M3D2M2DM3DM11D2M3D2M6D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D57M6D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M3D25M2D6MD14MD5M6D5MD2M9D4M8D5MDMD6M23D", "sequence": "MLLRSTINQVSAEEMGIDDYSGIVKRLKSRLILREDSQLGQPVLPSLRLGIILQLKAIGVEITAEQQQQNNSINDLISELESHENRMAQQMKGIDGIEKLNRVKIKMACLEWYKKDCKAKGIGYYDSYKNLYFCSDNDVTKHKKVLTNYWRNLVEDAERKPQKEGAYMRETWLYAGTNYRRMVEPLDIAEYYRQEGKRDYQTNGRSKHYILLEQWQKEHTEKLAGAPNDKKKQNVAGSLTEDSCFWMNVEEALISCKQLKDGSNVEKQSARERLNMFEQYVMDQINNYAVSPDIFLEKSSFMNWWKDFQEIIETSHDSPLRGFMKNCRRQYEKGQF", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 507, "right_index": 508, "representative": { "id": "POPTR_0001s29790", "score": -50 }, "domains": [] }, { "node_id": 633793, "distance_to_parent": 0, "protein_stable_id": "POPTR_0183s00200.1", "gene_stable_id": "POPTR_0183s00200", "gene_display_label": "POPTRDRAFT_591484", "gene_description": "Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9ND39]", "cigar": "2176D6MD6M2DMD12M3D3M2D2M5D5M3D57M6D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M3D25M2D6MD14MD5M6D5MD2M9D4M8D5MDMD7M22D", "sequence": "MACLEWYKKDCKAKGIGYYDSYKNLYFCSDNDVTKHKKVLTNYWRNLVEDAERKPQKEGAYMRETWLYAGTNYRRMVEPLDIAEYYRQEGKRDYQTNGRSKHYILLEQWQKEHTEKLAGAPNDKKKQNVAGSLTEDSCFWMNVEEALISCKQLKDESNIEKQSTRERLNMFEQYVMDQINNYAVSPDIFLEKSSFMNWWKDFQEIIETSHDSPLRGFMKNCRYRQYEKGQF", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 505, "right_index": 506, "representative": { "id": "POPTR_0183s00200", "score": 0 }, "domains": [] } ], "representative": { "id": "POPTR_0001s29790", "score": -49.988504 } } ], "representative": { "id": "POPTR_0001s29790", "score": -49.814439 } }, { "node_id": 6345420, "distance_to_parent": 0.093483, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 497, "right_index": 502, "children": [ { "node_id": 633700, "distance_to_parent": 0.053092, "protein_stable_id": "POPTR_0019s00980.1", "gene_stable_id": "POPTR_0019s00980", "gene_display_label": "POPTRDRAFT_573546", "gene_description": "Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9INY0]", "cigar": "962D17M14D6M82D4M41D7M114D4M2D27M25D14M17D13M5D12M13D15M3D4M10D6M25D7M5D4M2D2MD21M2D25MD23MD14M380D24M3D2MD17M12D5M2DMD11M8D15M2DMDM3D3M2D4M6D7MD8M10D11M16DM6D14M2D2M2DM3DM11D2M3D2M6D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D57M6D6MD13MD9MDM2D3M12D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M6D5MD2M9D4M8D5MDMD10M19D", "sequence": "MSQLPIFISGLDLANLVVNSDLLQISCGAIKDLQTESSSDQQDSCSLSLRYKLHKKSKYTHIAFTTSTLSRKELLQQGGDLVSSTTLKELEFPIFDFLCSETNRSFSIHRGAITLFKAHFKELSQLKTQIQDSKTGELLSTPLIVTGHSIGGSVASLFTLWLLDNIKQPLQKNQPPPKLPLCVTFGSPFIGNQGLQQAILEFSNWNSCFLHVVGNKDPFPKTSIAHNDTTQSVSEDYMAFGTFILCSEKGCACVDDLEVVSRLLESSRKQASCESQEIDYYVEIVNDLKSKVMIRGNSQLDLSYVQPLKAGIILQLEAIGVEMTTQQQQEKKDNNNLISKLEEREKVLMAELAKTRGSENNLNQIKIKMAQLEWYKKFCKKKEIGYYDCYKNQLWRSDRDVTRLKKFLTNYWKNLVESAQRKPQKEGAFIRAAWLYAGRNYRRMVEPLDIAEYYKENGNRDYQTHGRSRHYILLEQWQEEDDAKKLTSSPNNKKKEDVAGILTEDSCFWAKVEDALISCKLLKAETSCPVEKQSEKENLDMFEQYAMEQIINYAVSPEIFLKQSSFVKWWKLFQGIIETSHDSPLSDFMKNERYLQYEKRSASFR", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 500, "right_index": 501, "representative": { "id": "POPTR_0019s00980", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 96, "end": 226, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633821, "distance_to_parent": 0.046012, "protein_stable_id": "POPTR_0019s00960.1", "gene_stable_id": "POPTR_0019s00960", "gene_display_label": "POPTRDRAFT_665182", "gene_description": "Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9INY2]", "cigar": "962D17M14D6M82D4M41D7M114D4M2D27M25D14M17D13M5D12M13D15M3D4M10D6M25D7M5D4M2D2MD21M6D21MD23MD14M3DM376D24M3D2MD17M12D5M2DMD11M8D15M2DMD7M2DM9D7MD8M5D33M6D14M2D2M2DM3D14M3D14M2D10MD6M2DMD12M3D3M2D2M5D5M3D57M6D6MD13MD9MDM2D3M12D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M6D5MD2M9D4M8D5MDMD10M19D", "sequence": "MSQHPLFISGLDLADLVVNSDLLELSCGAIKDLQTEASSDQQDSCSLSLRYKLEKKSKYTLIAFTTSTLSRKELLQQGGDLVSSTTLMEMDLPIFDFLCTERNRSFSIHRGAITLFKTHFKELSQLKTQIHDSKTGELLRTPLIVTGHSIGGSVASLFTLWLLDNIKRNQPPPKLPLCITFGSPFIGNQGLRQAMLECLTWNSCFLHVVGNKDLFPKASISHYDSPTQSAIEEYKAFGTFILCSEKGCACVDDLEVVSRLLEITRRQASCEAQEIDYYVEIVNDLKSKVIISGDSQLDLSYVQPLKAGIILQLEAIGVEMTTQVMSLILDKLHFYIGVDSLPAFINVTIPWSFDLGFCLSNQQQRKVDNKNLISKLEEREKVLMAERVQTMDPRKRLNQIKIKMAHLEWYHKICKTKGIGYYDCYKNQLGSSDRDVTRLKKFLTNYWKNFVEGVERKPQKEGAFIRGTWLYSGRNYRRMVEPLDIAEYYRDSDKRDYQTHGRSRHYILLEQWQEDDDAEKLKSSPNNKKKQNVAGILTEDSCFWAKVEDALISCKLLKSGTSSAVEKQSAKENLDMFEQYAMNQINNYAVSPEIFLKESSFMKWWKTFQEIIETSHDSPLCDFMKNGRYLQYEKGSTFLQ", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 498, "right_index": 499, "representative": { "id": "POPTR_0019s00960", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 222, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "POPTR_0019s00960", "score": 0.046012 } } ], "representative": { "id": "POPTR_0001s29790", "score": -49.714589 } } ], "representative": { "id": "POPTR_0001s29790", "score": -49.611474 } }, { "node_id": 6345426, "distance_to_parent": 0.021122, "node_type": "speciation", "bootstrap": 4, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 405, "right_index": 494, "children": [ { "node_id": 6345428, "distance_to_parent": 0.174721, "node_type": "duplication", "bootstrap": 97, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 468, "right_index": 493, "children": [ { "node_id": 633733, "distance_to_parent": 0.16693, "protein_stable_id": "VIT_14s0066g01840.t01", "gene_stable_id": "VIT_14s0066g01840", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HV27]", "cigar": "957D22M14D6M82D4M41D7M120D27M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M7D20MD11M5D7MD14M13D4M363D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM129D16M12D11M15D5M66D13M114D5M93D", "sequence": "MGGRRMNQVPLFSSARKLGNLIVTSNLIDSALTKILELQRDQTALPSPVQYRVFYPSPKCTIVAFVSSPDCTQNPLPGQGDLVPSPLFDFLCTEEYKSVSINRAALTLFTSLHDHLSGLKTQLTVIEGRLIITGYSMGGSVASLFTLCLLEVINLSKPKCRPICITFGSPLIGDFGLQHSNWNSFFLHVVSNQDLVPGLFLPSDRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNSDLILELLKVISSEVARGLRDVDYRKILRNLKERAICKGLPQVGERFANPFAAGIIMELETNIGFNETKVNSFLPSNDVMEHGLHLIKYCNNCPI", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 491, "right_index": 492, "representative": { "id": "VIT_14s0066g01840", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 232, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345430, "distance_to_parent": 0.002437, "node_type": "duplication", "bootstrap": 97, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 469, "right_index": 490, "children": [ { "node_id": 633834, "distance_to_parent": 0.083884, "protein_stable_id": "VIT_14s0066g01820.t01", "gene_stable_id": "VIT_14s0066g01820", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HV25]", "cigar": "971D8M147D7M132D15M74D8M17D15M52D2M13DMD21M8D19MD11M5D7MD19M354DM20D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M11D10M22D14M3D2M23D5M3D6M2D10MD6M6D10M3D3M2D2M5D5M3D56M7D5M2D13MD9MDM14D2MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD3M26D", "sequence": "MKQLDHEISLIESNYLKKKKTLHISICVASSHYPLIGCDSTLNRKTVELLTVIEGQLIITGHSLGGAVASLFTLCLLDENLLKPKCRPFCITFGSPLVGGFGLQHSIWNSFFLHVVSNQDPVPGLFLPSGRGRSTPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILELLKVISSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFANPFSAGIIMELETIGFNQTKLLQHNIDIETVISAMEAEARNLTQKNKASDAKKLNEIKIDMTRLELYKKNSNMGYYDCFKNQGSKRDIHVEQFRVNLTGYWEGMVAQIQRKPHKEGATFRTRWLYAGTVYRRMVEPLDIAAFYREGRKDYMNKRSAHYKLLQEWYEEDVKPPSRDKLDSKKQKVSSILTEDSCFWAHVEEAILSCELLKSENCNLEEGKSSWDNLVKFEEYVMEQIDNYAVSPEIFLEKSSFMKWRGLYEGYIDTRSNSHSSPLISFMKNRSYRQYG", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 488, "right_index": 489, "representative": { "id": "VIT_14s0066g01820", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 55, "end": 169, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345432, "distance_to_parent": 0.001871, "node_type": "duplication", "bootstrap": 99, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 470, "right_index": 487, "children": [ { "node_id": 6345433, "distance_to_parent": 0.030097, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 481, "right_index": 486, "children": [ { "node_id": 633730, "distance_to_parent": 0.020145, "protein_stable_id": "VIT_14s0066g01830.t01", "gene_stable_id": "VIT_14s0066g01830", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HV26]", "cigar": "808D171M13D7M82D31M13D8M91D27M2D27M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M8D19MD11M5D7MD418M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM8D5M3D9MD8M11D10M22D14M3D2M23D5M3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD7MDMDM13D3MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD3M26D", "sequence": "MGGRRMNQVPLFSSARKLGNLIVTSNLIDSALTKILELQRDQTALPSPVQYRVFYPSPNCTIVAFVSSPDCTQNPLPGQGDLVPSPLFDFLCTEEYKSVSINRAALTLFTSLHDHLSGLKTQLTVIEGRLIITGYSMGGSVASLFTLCLLEVINLSKPKCRPICITFGSPLIGDFGLQHSNWNSFFLHVVWVKGLQIHFQLGSSWNLRRLDLMKQRFSSARELGNLMVTSNLIDSALTKILELQRDQTALLSSVQYRVFYPSPKCTIVAFVSSPDCTQNPLPGQGDLVPSPLFDFLCTEEYKSVSINRAALTLFTSFHDHLSGLKTQLTQIEGQLIITGHSLGGSVASLFTLCLLDGNLLKPNCRPFCITFGSPLIGGFGLQHSIWNSFFLHVVSNQDPVPGLFLPSGRGRSTPTSSHSQTTGYKPFGTYLLCSELGCACLEKPDLILGLLKVRSSEVAGGLQDVDYGEILRNLKERAICKGLQQVGERFADPFTAGIIMDLEIIGFDQTKLLQHNIDIETVISTMEEEARNPTKKNKAFDAKILNHKKKDMAGLEWYKKKSKDLNKGYYDCFKNQGSKRDIKIEQYGGHLTLYWKDMVAQVQRKPQKEGATFRTRWLYAGTVYRRMVEPLDIAAFYVEGGTDYMKNERSLHYKLLQQWYEEDVKPPSKDKLDSKKQKVSGILTEDSCFWAHVEEAILSCELLKSENCTLEQEKSSWDNLVKFEEYVMEQINNYAVSPEIFLGESSFMKWWGLYEGYIYARSNSHRSPLISFMKNVPGLFLPSGRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILELLKVISSEVAGGLRDVDYRKILINLKERAIFKGLQQVGERFADPLSAGIIMDLEIIGFDQTKLLRHNIDINTVIRILGAEARILAHKNKASDAKKLNDIKIHMAQLEWYKKKSKDLNKGYYDCFKNQGLKRDIKIEQYRGHLTIYWKDMVAQVQRKPQKEGASFRTSWLYPGTTYRRMVEPLDIAAFYREGRTDYINNGRSPHYKLLQQWYEEDVKPPSRDKLDSKKLKVSGILTEDSLFWAHVEEALLSCESLKSANSTLEQRKSSWDNLVKFGEYVMEQIGNYAVSPEIFLGESSFMKWWGVYEDYIDASNNFYGSPLINFMKDRSYRLYG", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 484, "right_index": 485, "representative": { "id": "VIT_14s0066g01830", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 190, "name": "AB_hydrolase", "id": 29058 }, { "interpro": "IPR029058", "start": 261, "end": 443, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633709, "distance_to_parent": 0.014184, "protein_stable_id": "VIT_14s0066g01810.t01", "gene_stable_id": "VIT_14s0066g01810", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HV24]", "cigar": "957D22M14D6M82D4M41D7M120D27M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M7D20MD11M5D7MD14M13D4M363D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M11D10M22D14M3D2M23D5M3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM14D2MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD29M", "sequence": "MEGRRMNQVPLFSSARELGNLIVTSNLIDSALTKILELQRDQTALPSPVQYRVFYPSPKCTIVAFVSSPDCTQNPLPGQGDLVPSPLFDFLCTEEYPSVSINGAALTLFTSLYDHLSGLIDELTVIEGRLIITGHSMGGSVASLFTLCLLEVINISKPKCRPICITFGSPLIGDFGLQHSNWNSFFLHVVSNQDLVPGLFLPSGRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILELLKVISSEVAGGLRDVDYRKILINLKERAIFKGLQQVGERFADPLSAGIVMDLEIIGFDQTKLLRHNIDINTVIRILGVEARILAHKNKASDAKKLNDIKIHMAQLEWYKKKSKDLNKGYYDCFKNQGSKRDIKIEQYRGHLTIYWKDMVAQVQRKPQKEGASFRTSWLYPGTTYRRMVEPLDIAAFYREGRTDYINNGRSPHYKLLQQWYEEDVKPPSRDKLDSKKLKVSGILTEDSLFWAHVEEALLSCESLKSANSTLEQRKSSWDNLVKFGEYVMEQIGNYAVSPEIFLGESSFMKWWGVYEDYIDASNNSYGSPLISFMKNRSYRLNQGLKETLQTEVFERKPQEYTGKPWWNK", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 482, "right_index": 483, "representative": { "id": "VIT_14s0066g01810", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 98, "end": 241, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "VIT_14s0066g01810", "score": 0.014184 } }, { "node_id": 6345435, "distance_to_parent": 0.018024, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 471, "right_index": 480, "children": [ { "node_id": 633746, "distance_to_parent": 0.027067, "protein_stable_id": "VIT_05s0077g01730.t01", "gene_stable_id": "VIT_05s0077g01730", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6H6V4]", "cigar": "597D412M72D52M77D41M2D27M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M8D19MD11M5D7MD18M376D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M11D10M22D14M3D2M23D5M3D6M2D10MD6M6D10M3D3M2D2M5D5M3D56M7D6MD13MD9MDM14D2MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD8M21D", "sequence": "MACPKLSFNCALTSLFDKRIVARHPDESSSFLTQIEGQLIITGHSLGGSVASLFTLRLLDGNLLKPKCRPFCITFGSPLIGDFGLQHSIWNSFFLHVVSNQDPVPGLFLPSGRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILGLLKVISSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFADPFSAGIIMELETIGFNQTKLLQHNIDINAMIRTMEAETRSLIQKNKASDAKKLNDIKRDMAHLEWYKKKSEMGYYDCFKNQGSKRDINVEQFRGNLTMYWEDMVAQVQRKPQKEGATFRTRWFYAGTVYRRMVEPLDIAAFYREGGTDYINNGRSLHYKLLQQWYEEDVKPPSRDKLDSKKQKVSGILTEDSLFWAHVEEAILSCELLKSQNCTLEQGKSSWDNLVKFEEYVMEHINNYAASPEIFSRESSFMKWWGLYEGYIDTCSNSHGSPLINFMKKRSYMKFSSARELANLVLASNLIDCAFTKILELKRGQTALPVQYRLYQLSSKCTIVAFVSSPDCTQYPLPGQGDLDRSPLFDFLRTEEYPSVSINRAALDLFTPLHDHLSGLTDELTRIEGQLIITGHSLGGSVASLFTLRLLDGNLLKPKCHPFCITFGSPLIGDFGLQDSKWNSFFLHVVSNQDPVPGLFLPSGRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILRLLKVISSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFADPFSAGIIMELETIGFNQTKLLQHNIDIDAMIRTMEEETRSLIQKNKASDAKKLNDIKRDMAHLEWYKKKSEMGYYDCFKNQGSKRDIHVEQFRVNLTKYWKDMVAQVQRKPQKEGATFRTRWLYAGTVYRRMVEPLDIAAFYGEGKTDYINKKRSLHYQLLQQWYEEDVKPPSRDKLDSKKQKVSGILTEDSLFWAYVEEAILSCELLKSQNCTLEQGKSSWDNLVKFEEYVMEQINNYAASPEIFSRESSFMKWWGLYEGYIDTCSNSHGSPLINFMKDRRYIQPEVDPFQ", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 478, "right_index": 479, "representative": { "id": "VIT_05s0077g01730", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 151, "name": "AB_hydrolase", "id": 29058 }, { "interpro": "IPR029058", "start": 567, "end": 706, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345436, "distance_to_parent": 0.00409, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 472, "right_index": 477, "children": [ { "node_id": 633726, "distance_to_parent": 0.008039, "protein_stable_id": "VIT_05s0077g01720.t01", "gene_stable_id": "VIT_05s0077g01720", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6H6V3]", "cigar": "962D17M14D6M82D4M41D7M122D25M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M8D19MD11M5D7MD18M376D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M11D10M22D14M3D2M23D5M3D6M2D10MD6M6D10M3D3M2D2M5D5M3D56M7D6MD13MD9MDM14D2MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD3M26D", "sequence": "MNQVPLFSSARELANLVLSSNLIDCAFTKILELKRGQTALPVQYRLYQLSSKCTIVAFVSSPDCTQYPLPGQGDLDRSPLFDFLRTEEYPSVSINRAALALFTPLHDHLSGLTDELTQIEGQLIITGHSLGGSVASLFTLRLLDGNLLKPKCRPFCITFGSPLIGDFGLQHSIWNSFFLHVVSNQDPVPGLFLPSGRSPLTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILGLLKVISSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFADPFSAGIIMELETIGFNQTKLLQHNIDINAMIRTMEAETRRLIQKNKVSDAKKLNDIKRDMAQLEWYKKKSEMGYYDCFKNQGSKRDLNVEQFRGNLTMYWEDMVAQVQRKPQEEGATFRTRWFYAGTVYRRMVEPLDIAAFYREGGTDYINNGRSLHYKLLQQWYEEDVKPPSRDKLDSKKQKVSGILTEDSLFWAHVEEAILSCELLKSKNCTLEQGKSSWDNLVKFEEYVMEQINNYAASPEIFLRESSFMKWWGLYEGYIDTCSNSHGSQLINFMKKRSYMKYG", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 475, "right_index": 476, "representative": { "id": "VIT_05s0077g01720", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 94, "end": 235, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633787, "distance_to_parent": 0.005764, "protein_stable_id": "VIT_05s0077g01750.t01", "gene_stable_id": "VIT_05s0077g01750", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6H6V6]", "cigar": "962D17M14D6M82D4M41D7M122D25M25D14M17D5M13D12M13D15M3D4M10D6M25D6M13DMD21M8D19MD11M5D7MD18M376D24M3D2MD15M7DM5D3M3D3MD11M8D15M2DMDM3D3M2D4M6D7MD8M14D7M22D14M3D2M23D5M3D6M2D10MD6M6D10M3D3M2D2M5D5M3D56M7D6MD13MD9MDM14D2MD4MDM2D2M8D21M2D6MD27M2D6MD14MD5M3D8MD2M9D4M8D5MDMD3M26D", "sequence": "MNQVPLFSSARELANLVLSSNLIDCALTKILELNRDQTALPVQYRLFQLSSKCTIVAFVSSPDCTQYPLPGQGDLDRSPLFDFLRTEEYPSVSINRAALTLYTPLHDHLSGLTDELTQIEGQLIITGYSLGGSVASLFTLRLLDGNLLKPKCRPFCITFGSPLIGDFGLQHSIWNSFFLHVVSNQDPVPGLFLPSGRSPPTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILGLLKVISSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFADPFSAGIVMELETIGFNQTKHNIDINAMIRTMEAETRSLIQKNKASDAKKLNDIKRDMAHLEWYKKKSEMGYYDCFKNQGSKRDINVEQFRGNLTMYWEDMVAQVQRKPQKEGATFRTRWLYAGTVYRRMVEPLDIAAFYREGGTDYINNGRSLHYKLLQQWYEEDVKPPSRDKLDSKKQKVSGILTEDSLFWAHVEEAILSCELLKSKNCTLEQGKSSWDNLVKFEEYVMEQINNYAASPEIFSRESSFMKWWGLYEGYIDTCSNSHGSPLINFMKKRSYMKYG", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 473, "right_index": 474, "representative": { "id": "VIT_05s0077g01750", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 94, "end": 231, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "VIT_05s0077g01750", "score": 0.005764 } } ], "representative": { "id": "VIT_05s0077g01750", "score": 0.009854 } } ], "representative": { "id": "VIT_05s0077g01750", "score": 0.027878 } } ], "representative": { "id": "VIT_05s0077g01750", "score": 0.029749 } } ], "representative": { "id": "VIT_05s0077g01750", "score": 0.032186 } }, { "node_id": 6345439, "distance_to_parent": 0.026108, "node_type": "speciation", "bootstrap": 43, "node_taxon_id": 91835, "node_taxon": "fabids", "left_index": 406, "right_index": 467, "children": [ { "node_id": 6345441, "distance_to_parent": 0.227645, "node_type": "duplication", "bootstrap": 94, "duplication_confidence_score": 1, "node_taxon_id": 3760, "node_taxon": "Prunus persica", "left_index": 457, "right_index": 466, "children": [ { "node_id": 633714, "distance_to_parent": 0.013795, "protein_stable_id": "EMJ20302", "gene_stable_id": "PRUPE_ppa015494mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5X2J2]", "cigar": "936D43M13D6M83D4M41D7M121D26M25D14M17D9M9D12M13D15M3D4M10D6M25D5M14D23M8D19MD23MD18M377D23M3D2MD14M6DMDM5D3M9D9M8D15M2DMDM3D3M2D4M6D16M5DM5D10M22D15M2D2M2DM3DM12DM2D3M6D6M2D10MD6M2DMD12M3D2M2D3M5D5M3D57M6D5M2D13MD7MDMDM2D15MD3MDM2D2M8D21M2D6M3D25M2D6MD14MD5M7D4MD2M9D4M8D5MDMD10M19D", "sequence": "MTFYSLALLQSRFSTRKKREISLDDVVERERRFSSGLELANVLLTSEPLHQSWDAIQNDKQKVNPNAQPTLHINTTQANLTIITFLTSPMSLRGQEGLILSSTLEERNLPDFEFLCNKSNPSFSINEAAIKLFASRFDELRRLKTEISRSNSLVIITGHSMGGCVATLFTLWLLESLNLSKAKRPLCITFGSPLIGDEHLRKCVSQFPTWTSCFLHVASIQDPVPKLFLSPNPTALGTGTQVSAYKPFGTFLLCSDSGCACFEDPDSILVLVAANSQGDQTQYPNLLERLKLKAFCKDVFELAESDRIPLKASIITQLAAIFGVPKSQALQQQRPNINILIMKMETREYKLAIQKTKTSNAAKKLNDIKVSMVYLEWYKKDSKGREIGYYDMYKNKWNRSDINVEEFKKKLSNYWQDSVEEVENKPQKEGTAFRTRWLMGGTTYRRMMEPLHIAEYYKDKDGKNYREERLKHFILLEKWLKEEEERKVAERIRRGETVEEGPSKSKALNVASSLTDDSCFWAHVEEALILCNQLENGQPSLREQCKQKLIEFEEYVLDALKNFAVTPDIFLKYSSFMAWWKQYNKIVGSSTTQLARIMTDGTYRDYEKGVKVVF", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 464, "right_index": 465, "representative": { "id": "PRUPE_ppa015494mg", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 127, "end": 283, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345443, "distance_to_parent": 0.012369, "node_type": "duplication", "bootstrap": 94, "duplication_confidence_score": 1, "node_taxon_id": 3760, "node_taxon": "Prunus persica", "left_index": 458, "right_index": 463, "children": [ { "node_id": 633702, "distance_to_parent": 0.0199, "protein_stable_id": "EMJ18618", "gene_stable_id": "PRUPE_ppa024391mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5XAS6]", "cigar": "968D11M13D6M83D4M41D7M120D27M25D14M17D9M9D12M13D15M3D4M10D38M5D5MD24M8D19MD23MD18M377D23M3D2MD14M6DMDM5D3M9D9M8D15M2DMDM3D3M2D4M6D16M5DM5D10M22D15M2D2M2DM3DM12DM2D3M6D6M2D10MD6M2DMD12M3D2M2D3M5D5M3D57M6D5M2D13MD7MDMDM2D15MD3MDM2D2M8D21M2D6MD27M2D6MD14MD5M7DMD2MD2M9D4M8D5MDMD10M19D", "sequence": "FSSGLELANVLLTSEPLHQSWDAIQNDKQKVNPNAQPTLHINTTQQANLTIITFLTSPMSLRGQEGLILSSTFKERNLPDFGFLLNKSNPSFSLNKAAINLFASRFDELRLLKTEVRTFSLFPSVFCLSLNSSFLLLTTCEFGETLEKISRSNSLVIITGHSMGGCVATLFTLWLLEGLNLFKAKRPLCITFGSPLIGDERFRKCVSQFPVWTSCFLHVASIQDPVPKLFLSPNPTALGTGTKVGAYKPFGTFLLCSDFGCACFEDPDLILELVAANSQGDQTQYPNLLERLKLKAFCKDVFELAESDRVPLKASIITQLAAIFGVPQSQALQQQQPNINILKKKMETHEYKLAIQKTKTSNAAKKLNDIKVSMVYLEWYKKEAKGREIGYYDMYKNKRNMNDVNVYEFKKKLSNYWQDLVEEVENKPQKEEAALRTRWLMGGTTYRRMMEPLHIAEYYKENDGKNYIEERPKHFILLEKWLKEEEERKVAERNRRGETVEDGPSKFKAQNVASILNDDSCFWAHVEEALILCYQLERGQTSFQEREQCKQKLTEFEEYVLDALKNFAVSPDIFLKYSSFMHWWKQYNKIVGSSTQLARIMTDGRYRDYEKGVKVVF", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 461, "right_index": 462, "representative": { "id": "PRUPE_ppa024391mg", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 148, "end": 285, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633785, "distance_to_parent": 0.016972, "protein_stable_id": "EMJ16217", "gene_stable_id": "PRUPE_ppa003247mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5WQZ4]", "cigar": "964D15M13D6M83D4M41D7M120D27M25D14M17D9M9D12M13D15M3D4M10D6M25D5M14D23M8D19MD23MD18M377D23M3D2MD14M6DMDM5D3M9D9M8D15M2DMDM3D3M2D4M6D16M12D9M22D15M2D2M2DM3DM12DM2D3M6D6M2D10MD6M2DMD12M3D2M2D3M5D5M3D57M6D5M2D13MD9MDM2D4MD13M2DM2D2M8D21M2D6MD27M2D6MD20M9D2MD2M9D4M8D5MDMD13M16D", "sequence": "MSNQFSSGLELANVLLTSEPLHQSWDAIQNDKQKVNPNAQPTLHINTTQQANLTIITFLTSPMSLRGQEGLILSSTFKERNLPDFGFLLNKSNPSFSLNEAAIKLFASRFDELCLLKTEISRSNSLVIITGYSMGGCVATLFTLWLLESLNLSKAKRPLCITFSSPLIGDEHFRKCVSQFSAWTSCFLHVASIQDPVPKLFLSPNPTALGTGTKVGAYKPFGTFLLCSDSGCACFEDPDLILELVAANSQGDQTQYPNLLERLKLKAFCKDVFELAESDRVPLKASIITQLAAIFGVPPSQALQQKQLNSLIKKMETHEYKLAIQKTRASNAAKKINDMKVNMAYLEWYKKESKDREIGYYDVYKNKHNRADFNVQEFKKKLSNYWQDLVEEVENRPQKEGAALRTRWLMGGTNYRRMMEPLHIAEYYKDKDGKNYIEERPKHFILLEKWFEEEEERKVAERIRRGETVEDGPSKSKAQNVASSLTDDSCFWAHVEEALILCNQLEKGQPSFQEREQCKQKLIEFEKYVLDALKNFAVTPDIFLKYSSFMAWWKQYNKIVRSSTQLGRIMTDGTYRHYEKGVKVVFEPL", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 459, "right_index": 460, "representative": { "id": "PRUPE_ppa003247mg", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 124, "end": 256, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "PRUPE_ppa003247mg", "score": 0.016972 } } ], "representative": { "id": "PRUPE_ppa015494mg", "score": 0.013795 } }, { "node_id": 6345445, "distance_to_parent": 0.162877, "node_type": "duplication", "bootstrap": 86, "duplication_confidence_score": 1, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 407, "right_index": 456, "children": [ { "node_id": 6345447, "distance_to_parent": 0.035296, "node_type": "speciation", "bootstrap": 15, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 418, "right_index": 455, "children": [ { "node_id": 6345458, "distance_to_parent": 0.039738, "node_type": "duplication", "bootstrap": 95, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 445, "right_index": 454, "children": [ { "node_id": 633776, "distance_to_parent": 0.034846, "protein_stable_id": "GLYMA19G01605.1", "gene_stable_id": "GLYMA19G01605", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7MVX5]", "cigar": "962D17M14D6M82D4M41D7M116D4M2D25M25D14M17D9M9D12M13D15M3D4M10D6M31DM5DM3D4MD21M9D18MD23MD18M376D24M3D2MD17M5DM6D3M2D3MD11M8D15M2DMD7M2D4M6D7MD8M12D9M22D15M2D2M2D3M14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MSQPTLFSSGFELASSVTSSVLLHRSWNVITSRYAGIVTNVGEGVSWKVYREPGSDLTIIAFEVKLDFSNVQAGLVSSNTLRENNFHHFEFLCTKKDPFFSVNKTAISLFSENYEKLDQLKSEINSSTKLIVTGHGLGGAVASLFTISLLNSIGSGKNRPLCITFGSPLIGDKKLQQAISRSSNWNSCFLHVVSLKDPLPTLFITNYSSSPAVLTPETSGYMPFGTFFLCSDANSTCFENPDSILELLIAMGSIHTQNQGFQSSDYGNIVEKLNDKVICKFFSTRVENMAHAGSALESSISLQLQALALTPHLQQQNIDTNTLETKIKIQEQKFILHRRIKNFDPAKKLNVVKLCMSQLEWYKKETKNQRIGYYDSYKNMNSPWDYDVIQFHKRLTNYWEKMVEEVEMKPQKEGAAFRTRWLYAGTNYRRMVEPLAVAQYYREGGIDYVTQNRSKHFVRLEEWLNEGTKKATSDLSSTSKKNVEALLTFDSCFWAHVEEALLSCKELKVVREKEETLKKLVIFEEYVYGLVKNYAVSPEIFLAQSSYMCWWNEYKAIKGTFYNSALSNFMSDARKREQYALGVYDFP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 452, "right_index": 453, "representative": { "id": "GLYMA19G01605", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 39, "end": 206, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345459, "distance_to_parent": 0, "node_type": "gene_split", "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 446, "right_index": 451, "children": [ { "node_id": 633811, "distance_to_parent": 0, "protein_stable_id": "GLYMA13G04561.1", "gene_stable_id": "GLYMA13G04561", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7LXC4]", "cigar": "962D17M13D7M82D4M41D7M116D4M2D25M25D14M17D9M9D12M13D15M3D4M10D6M25D3M14D3MD21M9D18MD23MD14M3DM376D24M3D2MD17M5DM6D3M2D3MD11M8D15M2DMDM50D6M19D17M2D2M2D5M12DM12D5M2D10MD6M2DM28D5M192D6M93D", "sequence": "MTQSALLGRGIELASSLTSSAVLLRKPWDVITSRYAGIITSEGEGISWKLFREPGLDLTILAFDVTQDSSNPPKELVYSNACGEKIFRHFEFLHTKKSPFFSVNSAAILLLDKNYEQLDQLKSEINSSPRLIVTGLGLGGPIASLFTLSLLDTNNDKKKPPLCITFGSPLIGDKKFQKAISRSSNWNSCFLHVVSLNDPLPRLFVTNSPAASTPQTSAYMPFGTFLLCSDVNSTCFENPDSILEQLIAMGSIHTQNQGFQSSDYGNIVEKLNDKVICKDFSTTHLQQQNIDTNTLETKSKIQQKFIFPRRVIIYPAKKLNEMKVHMAQLEWYKKKTKNQRIDTMTATRI", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 449, "right_index": 450, "representative": { "id": "GLYMA13G04561", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 110, "end": 234, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633745, "distance_to_parent": 0, "protein_stable_id": "GLYMA13G04571.1", "gene_stable_id": "GLYMA13G04571", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7LXC5]", "cigar": "2239D45M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MVEEVEMKPQKEVAAFHTRWLYGGTNYRRMVEPLAIAQYYRDGGKEYMTQNRSKHFVQLEEWLNEETKKATSDLSSTSKKNVEALLTFDSCFWAHVEEALLSCKELEVVREKEETLKKLVEFEEYVYELLRNYVVSPEIFLAQSSYMRWWNKYQAIKGTSYNSTLTSFMNDARKREQYTLGAYDFP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 447, "right_index": 448, "representative": { "id": "GLYMA13G04571", "score": 0 }, "domains": [] } ], "representative": { "id": "GLYMA13G04561", "score": 0 } } ], "representative": { "id": "GLYMA13G04561", "score": 0 } }, { "node_id": 6345449, "distance_to_parent": 0.027625, "node_type": "duplication", "bootstrap": 18, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 419, "right_index": 444, "children": [ { "node_id": 6345452, "distance_to_parent": 0.071495, "node_type": "duplication", "bootstrap": 4, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 426, "right_index": 443, "children": [ { "node_id": 633706, "distance_to_parent": 0.063533, "protein_stable_id": "KEH24926", "gene_stable_id": "MTR_6g008055", "gene_description": "senescence-associated protein", "cigar": "962D17M14D6M82D4M41D7M112D8M2D25M25D9M22D15M3D12M13D15M3D4M10D6M41D4MD21M6D21MD23MD14M390D14M3D2MD17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D18M11D10M22D15M2D2M2D2M15DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD8M20D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MSQLKLFSGGAEHASFVTSYEILKKTWNVISSSYQDIVTNDDDDDGVGLCWKVYKEQSSDLTIIAFEATKDYSNLQSDLVSSSDLKENKNFHQFEFLCTKKNPSFSLNNTAVSLFCDNLQKLDQLKSKISTPLIVTGKGLGGSIASLFTISLLDNHISSWNFRNRPLCITFGSPLVGDKKLQQAISRGSYWNSCFIHVVSCNDPLPRLFTTNYMPFGTFLFCSDSGSTCFENPDSNLEILITLNKVHGQNQGFDSAEYGNLVEKLRRKTIFKDSSTPTIDKNNSDSLAIGISLQLQQTLGLTPHMLQKQNIDINVLETMIKTLEARFIIQKKISFNPSNKQNEMKGCIAQVEWYKKKTTNLDIGYYDSYKNMYEISDYDVVEFHKKLTSYWEKMVEDVEMKPKKEGAFFPTCWLYGGIIYRRMVEPLAIAQYYKEGGKDYVNKKRSKHFKKLEEQSRNAINELNITRKTNMKMILTRDSCFWAHVEEAILACNELKVVKDKEEVLKKLVEFEDYVYCLLKDYQVSSEIFLSQSSYMSWWKDYKAIKGRSYTSKLDNFMNDAEKVKLYGLGAYEFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 441, "right_index": 442, "representative": { "id": "MTR_6g008055", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 20, "end": 227, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345453, "distance_to_parent": 0.027299, "node_type": "duplication", "bootstrap": 2, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 427, "right_index": 440, "children": [ { "node_id": 6345456, "distance_to_parent": 0.05625, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 434, "right_index": 439, "children": [ { "node_id": 633759, "distance_to_parent": 0.053901, "protein_stable_id": "KEH24915", "gene_stable_id": "MTR_6g007985", "gene_description": "lipase", "cigar": "1261D19M74D12M13D15M3D4M10D6M43D2MD21M9D18MD23MD14M390D14M3D2MD17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D9MD8M11D10M22D15M2DM3D3M14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MPERRTKVKVARPTIVAKMRNFESDKSKKGQPGIYCSSYLNPYATILMQILGAYPGTPLIVTGKGLGGSIASLFTISLLDNIGSTKNRPLCITFGSPLVGDRKLQRAISRSSNWNSCFINVVFCNDPHPRLFITNYMPFGTFLFCSDSGSTCFENPESNLEIIVTLSKMHGQNQGFKLDEYGSIVENLRRRAFFKDVSTPAGDRTHSDKLVIGISLQLQALGLTPNILQELDIDVNALETKIKRLEQFLIFQKKTSFDPSKKLNEMRRHMAQLEWYRKKTKNLDIGYYDSYKNKNVSADYEVDWYLKSIIFFWEKMVEEADLKPQREGAAFRTRWIFGGTTYRRMVEPLAIAQYYRDGGKDYINKQRSKHFKALEEWLEEGQTKAKIESNRINRKNVEVILTIDSCFWAHVEEAILACKELKVVKYKEEVLNKLVEFENYVYGLLKDYVVSPEIFLRQSSYMSWWNNYKVVKGSSYTSKLANFMNDAGNIKLYGLGGYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 437, "right_index": 438, "representative": { "id": "MTR_6g007985", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 158, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633712, "distance_to_parent": 0, "protein_stable_id": "KEH24918", "gene_stable_id": "MTR_6g008015", "gene_description": "senescence-associated protein", "cigar": "960D19M14D6M82D4M41D7M116D4M2D25M25D9M22D15M3D12M13D15M3D4M10D6M25D7M11D2MD21M9D18MD23MD14M390D14M3D2MD17M5DM6D3M2D3MD11M8D15M2DMD7M2D3M7D7MD8M11D10M22D15M2D2M2D3M14DM3D2M6D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MAQLPPKLFSSGIEHASFVTSYQILKKAWNVISSNYQDIVTNDGVGLCWKVYKEQNPDLTIIAFEATKDSSNLQSDLISSSDLNKKKNFHQFDFLCSKKNPSFSLNSTAFSLFYDNIQKLDELKSKILGAYPGTPLIVTGKGLGGSIASLFTISLLDNIGSTKNRPLCITFGSPLVGDRKLQRAISRSSNWNSCFINVVFCNDPHPRLFITNYMPFGTFLFCSDSGSTCFENPESNLEIIVTLSKMHGQNQGFKLDEYGSIVENLRRRAFFKDVSTPAGDRTHSDKLVIGISLQLQALGLTPNILQELDIDVNALETKIKRLEQFLIFQKKTSFDPSKKLNEMRRHMAQLEWYRKKTKNLDIGYYDSYKNKNVSADYEVDWYLKSIIFFWEKMVEEADLKPQREGAAFRTRWIFGGTTYRRMVEPLAIAQYYRDGGKDYINKQRSKHFKALEEWLEEGQTKAKIESNRINRKNVEVILTIDSCFWAHVEEAILACKELKVVKYKEEVLNKLVEFENYVYGLLKDYVVSPEIFLRQSSYMSWWNNYKVVKGSSYTSKLANFMNDAGNIKLYGLGGYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 435, "right_index": 436, "representative": { "id": "MTR_6g008015", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 20, "end": 235, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "MTR_6g008015", "score": -100 } }, { "node_id": 6345454, "distance_to_parent": 0.01363, "node_type": "duplication", "bootstrap": 4, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 428, "right_index": 433, "children": [ { "node_id": 633786, "distance_to_parent": 0.114956, "protein_stable_id": "KEH16187", "gene_stable_id": "MTR_0286s0040", "gene_description": "lipase", "cigar": "1336D9M115D2MD21M6D21MD23MD14M390D14M3D2MD17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M6D7M52D14M3D2M2D3M14DM3D2M14D17M9D7M8D2M5D5M14D36M32D4MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MQILGADPVTPLIVTGRGLGGSIASLFTISLLDNHISSWNFRNRPLCITFGSPLVGDKKLQQAISRSSNWNSCFIHVVSRNDPLPRLFVTNYMPLGTFLFCSDSGSTCFENPDSNLEILITLNKVHGQNQGFDSAEYGNLVEKLRRKTIFKDSSTPTIDKNNSDSLAIGISLQLQQTLRLTPQLLQEHDININVLETKIKKLEDFIQKKTSFDPSKKLNEMKRHMMVEEAELKPQREGAAFRNRWLFGGTTYRRMVEPLAIEWLEEDSTKTKNELNSTSKKKVEVILTIDSCFWAHVEEAILACKELKEVKDKEEVLNKLVEFEDYVYGLLKDYAVSPEIFLRQSSYMSWWKDYKAIKGSSYTSKLANFMNDAGKIKLYGLGAYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 431, "right_index": 432, "representative": { "id": "MTR_0286s0040", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 3, "end": 105, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633783, "distance_to_parent": 0.010215, "protein_stable_id": "KEH24914", "gene_stable_id": "MTR_6g007975", "gene_description": "senescence-associated protein", "cigar": "960D19M14D6M82D4M41D7M116D4M2D25M25D9M22D15M3D12M13D15M3D4M10D6M28D4M5DM3D4MD21M9D18MD23MD14M390D14M3D2MD17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D18M11D10M22D15M2D2M2D3M14DM3D2M8D4M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD2M6D9M12D", "sequence": "MAQLPPKLFSSGIEHASFVTSYQILKKAWNVISSNYQDIVTNDGVGLCWKVYKEQNPDLTIIAFEATKDSSNLQSDLISSSDLNKKKNFHQFDFLCSKKNPSFSLNSTAFSLFYDNIQKLDELKSKILGADPVTPLIVTGRGLGGSIASLFTISLLDNIGSTKKRPLCITFGSPLVGDKKLQQAISRSSNWNSCFIHVVSRNDPLPRLFVTNYMPLGTFLFCSDSDSTCFENPDSNLEILITLSKVHGQNQGFDSAEYGNIVEKLRRKAIFKDSFLLAGDRNDSDSLAVGISLQLQQTLRLTPQLLQEHDININVLETKIKKLEDFIQKKTSFDPSKKLNEMKRHMAQLEWYKMKTKNLDIGYYDSYKNKNAQFDHDVVVFHKILTNYWEKMVEEAELKPQREGAAFRNRWLFGGTTYRRMVEPLAIAQYYRDGGKDYVNKHRSKHFKTLEEWLEEDSTKTKNELNSTSKKKVEVILTIDSCFWAHVEEAILACKELKEVKDKEEVLNKLVEFEDYVYGLLKDYAVSPEIFLRQSSYMSWWKDYKAIKGSSYTSKLANFMNDAGKIKLYGLGAYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 429, "right_index": 430, "representative": { "id": "MTR_6g007975", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 20, "end": 218, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "MTR_6g007975", "score": -99.989785 } } ], "representative": { "id": "MTR_6g007975", "score": -99.97615499999999 } } ], "representative": { "id": "MTR_6g007975", "score": -99.94885599999999 } }, { "node_id": 6345450, "distance_to_parent": 0.050041, "node_type": "duplication", "bootstrap": 99, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 420, "right_index": 425, "children": [ { "node_id": 633757, "distance_to_parent": 0.107695, "protein_stable_id": "KEH34494", "gene_stable_id": "MTR_3g467350", "gene_description": "lipase", "cigar": "962D17M14D6M82D4M41D7M116D4M2D25M25D14M17D7M11D12M13D15M3D4M10D6M25D7M5DM5D2MD21M9D18MD23MD10M405D3M6D17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D9MD8M5DM5D10M22D15M2D2M2DMDM14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D22M111DMD16M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD11M18D", "sequence": "MTQSKLFSSGIELASFVTSSSILCKSWTSISSNNEDIIWNDGIDVSWKVDEESSSDFTIVAFKATSSNVQADFVSSAELKEGNFLDFEFLCSKRIPIFSLNRTALSLFRDNHQELEKLKIEINSFTNLSTPLIFTGHGLGASIASLFVISLLQNVGSGKNRPLCITFGSPLVGDKRLQQAISCSSIWDSCFILVCHTKTHFQGSSLQIELNPDSILEILMALVSVHDKNEKLESVDYGNTVKTLYLKAECLGFSTQAENMTNKDSLATGIILQLRELGLTPHMQQQQKNIDINNLETKLKKLEEIFIHQKKISFYPSKKLNDVKVHMAQLEWFKMATKNQQIGYYDSYKNMNTPVDHEVVQFHNKLTVYWEKMVEEVQMKPQKEDSCFWAHVEEALLLCRELKIVEEKEETLNKLFEFEVYVYELLKDYEVSPDIFLAKSSYIRWWNEYKEIKGFSYTSALANFMNDDTKIKQYAIGAYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 423, "right_index": 424, "representative": { "id": "MTR_3g467350", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 34, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633707, "distance_to_parent": 0.056577, "protein_stable_id": "KEH34496", "gene_stable_id": "MTR_3g467360", "gene_description": "senescence-associated protein", "cigar": "956D23M14D6M82D4M41D7M122D25M23DMD14M17D9M9D12M13D15M3D4M10D6M25D7M11D2MD21M9D18MD23MD14M386D18M6D17M5DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D9MD8M5DM5D10M22D15M2DM3D3M14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2D2M13D4MDM2D2M8D21M2D6M5D23M2D6MD14MD5M6D5MD2M9D4M8D5MDMD2M6D9M12D", "sequence": "MNIIADKTFSCRFSSGIELASFVTSSTILSKSWTTISSDNYENGVGLSWKLDKETGSDFTILAFKATSDDSSSVQADLISSDELKEDNFLDFEFLCSKKIPTFSLNKTAVSLFRENHQEFDSLKTEINSSNPRTPLIVTGHGLGGSIASLFVISLLHNIGSVKNRPLCITFGSLLVGDRRLQQAISRSSIWNSCFIHVLSHKDPLPRLFITDRTSTYMPFGTFILCSDATSFENPDSIFEIFVALASVHDKNQELESVDYGNIVKNLYRKATWIDFPAQAENLTNPDSLATDISLQLGALSLTPHVQPQQENVGFNTLETKLKELEERFFLQKRILFDPSKKLNDRKVDMAQLEWYKKKSKNEQIGYYDSFKNMNFPDDYDVNQFHKRLTFYWEKMVEEAEMKPQKEGAAFRTRWLYAGTTYRRMVEPLSIAKYYSEGGKDYINNKRSEHFKQLEEWLFEDSQNRTSDVNSTPRKNVEAILTIDSCFWAHVEEALLLCGELKGVKEKDDVLKKLFKIEVYVYGLLKDYAVSPEIFLARSSYIRWWNEYKKIKGSSYTSALANFMNDDTKIKQYAIGAYDFP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 421, "right_index": 422, "representative": { "id": "MTR_3g467360", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 39, "end": 221, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "MTR_3g467360", "score": -99.943423 } } ], "representative": { "id": "MTR_3g467360", "score": -99.893382 } } ], "representative": { "id": "MTR_3g467360", "score": -99.865757 } }, { "node_id": 6345462, "distance_to_parent": 0.030661, "node_type": "speciation", "bootstrap": 96, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 408, "right_index": 417, "children": [ { "node_id": 633715, "distance_to_parent": 0.17613, "protein_stable_id": "AES74543", "gene_stable_id": "MTR_6g007980", "gene_description": "senescence-associated protein", "cigar": "962D17M14D6M82D4M41D7M119D28M23DMD14M17D9M9D12M13D15M3D4M10D6M25D3M14D3MD21M9D18MD23MD14M386D18M3D2MD15M7DM6D3M2D3MD11M8D15M2DMDMD5M2D4M6D7MD8M12D10M22D14M2D2M2D5M12DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2DM15D3MDM2D2M8D21M4D32M2D6MD14MD5M6D5MD2M9D4M8D5MDMD12M17D", "sequence": "MVQSQQFSSGIEVATFVTSSGLLRKLWNVNDANIVSNVVGNNGLSWKVYKEQDTDGTIVAFETAPSNSANLQSELVSSTELKEKNFLHFQFLSTKANPLFHLNIAAVSLFFENHQGLDQLKSEVNSSPKLIITGLALGGSIASLFTLLLLDGFDSRKKKPLCITFGSPLIGDKGLQNSISHSSSWNSCFLHVVSSNDPLPRKFITDHTSSYVPFGTFLVCHDTYSTCFENSDSVLAVLETSIHDQSQVFGSVEYRNIVEILHRKAIWKDTANQVQGMNYSDSLQACIGLQLLTLGLIPHMQQQQQQEIDIITLVEKMENLEKNFIKQKREKFDPSKKLNLMKINMAELEMYKTNSKNRNIGYYDSYKKMNSTDDHDVVTRHKKLSNYWKKMVQDSLMKPQKEGASLRTRWLYGGTTYRRMVEPLEIAQFYLNGGKDYVTTERSSHYKQLEDWLVEAAATTTSSNVTKDKVESILTLDSCFWAYVEEALISCKKLDEKLSDIEKDEATRKLVEFENYVYGLLKEYAVSPEIFLSESSYMAWWSQYKKIKAASYGSKLTNFMSNAYNYNVQYVGGTYKFD", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 415, "right_index": 416, "representative": { "id": "MTR_6g007980", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 107, "end": 208, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345464, "distance_to_parent": 0.096017, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 409, "right_index": 414, "children": [ { "node_id": 633768, "distance_to_parent": 0.039154, "protein_stable_id": "GLYMA13G04651.1", "gene_stable_id": "GLYMA13G04651", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7LXC9]", "cigar": "962D17M14D6M82D4M41D7M117DM2D27M25D13M18D9M9D12M13D15M3D4M10D6M25D3M14D3MD48MD23MD14M387D17M3D2MD15M7DM6D3M2D3MD11M8D15M2DMD7M2D4M6D7MD8M5DM5D10M22D15M2D2M2DMDM14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2DM14D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M4D7MD2M9D4M8D5MDMD15M14D", "sequence": "MALPQSFGCGLVQASFVTSSGLLNKVWSVISSRDKGIVSYSGNNGLFWKVSEDSGLTVVAFEVNPGFDLLSDFVSSSYLKKNNFNHFEFLCTKKNPDFSVNKSAVDLFSENLQRLDELKSKIDSSPRLIVTGYGVGGPIASLFTLSLLGNKKKKDDKKKSSEKKKPPLCITFGSPLVGNNKFQEAISRSSTWSSCFLHVVSIKDPVPKRLNPQTSAYMPFGTFLFCSDINSTCFENPESVLEILVSSINDQNQGFQPKDYSNIVVNLHRKAIFKDVTPRGQDSTHSTNSLCASICLQLWEAGLTPDMQQQHLNIDINALVTKLEELENKFIYQKRVKFYPSKKLNVMKIEMSKLGWYKRYCKNHNIGYYDSFKRGITTSDLDAIQCQQSLRNYWIDMVEEAEMKPQTEGAAFCTRWLFGGTNYKRMVEPLDIADYYRSGGKDYVAKGRSRHYIVLEEWLEEEKKDTSDSNSTNKKNVESILTFDSCFWAHVEEAILSCKVLEDVQSSVTEKEEETGKLLEFEKYVYGLLTKYEVSSEIFLEHSSYMTWWNQYKAIKNKETSYNSALADFMSNPDYYNVQYAKGTYNFLPGA", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 412, "right_index": 413, "representative": { "id": "GLYMA13G04651", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 97, "end": 262, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633738, "distance_to_parent": 0.038702, "protein_stable_id": "GLYMA13G04540.1", "gene_stable_id": "GLYMA13G04540", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1LWE5]", "cigar": "962D17M14D6M82D4M41D7M117DM2D27M25D10M21D11M3DM3D12M13D15M3D4M10D6M25D3M14D3MD21M7D20MD23MD14M387D17M3D2MD15M7DM6D3M2D3MD11M8D15M2DMDM3D3M2D4M4D18M5DM5D10M22D15M2D2M2DMDM14DM3D2M2DM3D6M2D10MD6M2DMD12M3D3M2D2M5D5M3D56M7D6MD13MD9MDM2DM14D4MDM2D2M8D21M2D6MD27M2D6MD14MD5M6D5MD2M9D4M8D5MDMD15M14D", "sequence": "MTLPQSFGCGLVQAPLVTSSGLLTKVWSVISSRDEDIVSYSGNNGLSLKVSEDSGLTVVAFEVNPDFDLQSTVVSFSDPKENNLNRFEFLCTKKHPDFSVNKSVVDLFSKNLPRLDELKSKIDSSPRLIVTGRGLGGPIASLFTLSLLGNKNSSEKKKPPLCITFGSPLVGNKKFQEAISRSSTWSSCFLHVVSIKDPFLKRLNPDIKDYMPFGTFLFCSDISSTCFENPKSVLELLVISIKDQNQAFPSIDYGNIVGNLYIKAICKDFTPRGQDFTDSNSLRASIRLQLWAALGLTPDMQQQHLNIDINALVTKLEKLEKEVIFQKGNKFDPSKKLNVMKIEMAKLEWYKKYSKNNKIGYYDSFKRGISTSDLDVVQCQKTLRNYWIDMVAEAELKPQTEGAAFRTRWLFGGTNYRRMFEPLDIAEYYANGGKDYEAKGRSRHYIVLQEWLEEDKKEKSNSNSTNKKDVESILTFDSCFWAHVEEAILSCKVLKDEQSSVTEKEEETGKLLEFEKYVYGLLTKYEVSSEIFLRQSSYMIWWNQYKAIKGTSYNSALADFMSNPDHYNVLYIKGTYNFPPQA", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 410, "right_index": 411, "representative": { "id": "GLYMA13G04540", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 99, "end": 219, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GLYMA13G04540", "score": 0.038702 } } ], "representative": { "id": "MTR_6g007980", "score": -99.82387 } } ], "representative": { "id": "MTR_3g467360", "score": -99.830461 } } ], "representative": { "id": "MTR_3g467360", "score": -99.667584 } } ], "representative": { "id": "MTR_3g467360", "score": -99.64147600000001 } } ], "representative": { "id": "MTR_3g467360", "score": -99.620354 } } ], "representative": { "id": "AT5G14930", "score": -174.516918 } } ], "representative": { "id": "AT5G14930", "score": -174.515047 } } ], "representative": { "id": "AT5G14930", "score": -174.29296 } }, { "node_id": 6345182, "distance_to_parent": 0.029664, "node_type": "duplication", "bootstrap": 15, "duplication_confidence_score": 0.9167, "node_taxon_id": 3398, "node_taxon": "Magnoliophyta", "left_index": 3, "right_index": 400, "children": [ { "node_id": 6345183, "distance_to_parent": 0.320503, "node_type": "speciation", "bootstrap": 3, "node_taxon_id": 3398, "node_taxon": "Magnoliophyta", "left_index": 194, "right_index": 399, "children": [ { "node_id": 6345184, "distance_to_parent": 0.455228, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 13333, "node_taxon": "Amborella trichopoda", "left_index": 393, "right_index": 398, "children": [ { "node_id": 633718, "distance_to_parent": 0.046226, "protein_stable_id": "ERM96883", "gene_stable_id": "AMTR_s00074p00016180", "gene_description": "hypothetical protein", "cigar": "1481D3M50DMD7M433DM11DMD2M2D3MD11M54D7M44D14M3D2M2DM3DM11D2M3D2MDM4D6M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD4M39D24M14D45MD3M29D13M32D", "sequence": "MKDVVFMEKLDQLALSTQGSNDNETNSLLHDFGLGTKARLALCMARQSAKQKQDNQAKVSKSFDKLQPALSWLMDYRDSYEKEGTCYYDPFKAQNNTKDFKANVTRLQLAGLWDEVIALLRDHQLPDIFETNPEWVGKATTYRRLVEPLDIANYYRHARNKDCGPYMDKGRPRRYKYPQKWLERSEPKIGSPKFDSSWLMAEVEEMLRERSFIDMKEKVLDFEMEMLGWKNEGMLVLRTDIGVAEGSTFLKWWNTLPVEHRENSCIKDWFVS", "taxon_id": 13333, "system_name": "amborella_trichopoda", "assembly": "GCA_000471905.1", "left_index": 396, "right_index": 397, "representative": { "id": "AMTR_s00074p00016180", "score": 0 }, "domains": [] }, { "node_id": 633699, "distance_to_parent": 0.038603, "protein_stable_id": "ERM98959", "gene_stable_id": "AMTR_s00226p00000920", "gene_description": "hypothetical protein", "cigar": "1126D7M336D15M50DMD7M433DM11DMD2M2D3MD11M6D17M2DMDM4D4M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDM4D6M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD4M39D24M14D45MD3M29D13M32D", "sequence": "MRSMRMVGLENCEATLQVMFYTALADAHEVVEVAKRGVAQHLIYGSMCERIRMKDVVFLEKLDQLPLSTQGSNDNEANSLLHEFGLGTKARLALCMARQSEMQKHDNHAKVCKSFDKLQPALSWLMDYRDSYEKEGTCYYDAFKAQKNTKDFKANVTRLQLAGLWDVVIALLRDHQLPDIFETNPEWVRKATTYRHLVEPLDIANYYRHARNKDGGPYLDKGRPRRYKYAQKWLERSEPKIGSPKFDSSWLMAEVEEMLRERSFIDMKEKVLDFEMEMLGWKNEGMLVLRRDIGVDEGSTFLKWWNTLPVEHRKNSCIKDWFVS", "taxon_id": 13333, "system_name": "amborella_trichopoda", "assembly": "GCA_000471905.1", "left_index": 394, "right_index": 395, "representative": { "id": "AMTR_s00226p00000920", "score": 0 }, "domains": [] } ], "representative": { "id": "AMTR_s00226p00000920", "score": 0.038603 } }, { "node_id": 6345187, "distance_to_parent": 0.027772, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 1437183, "node_taxon": "Mesangiospermae", "left_index": 195, "right_index": 392, "children": [ { "node_id": 6345188, "distance_to_parent": 0.094729, "node_type": "speciation", "bootstrap": 95, "node_taxon_id": 4734, "node_taxon": "commelinids", "left_index": 306, "right_index": 391, "children": [ { "node_id": 633762, "distance_to_parent": 0.205914, "protein_stable_id": "GSMUA_Achr8P25290_001", "gene_stable_id": "GSMUA_Achr8G25290_001", "gene_description": "lipase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G25290_001]", "cigar": "995D5M82D3M41D7M117DM7D22M22DM4D8M16D4MD11M7D13M12D15M3D3MD5M6DM14D23M10D2MD21M4D23MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M5D18M2DMDM3D5M2D2M4D17M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD11M18D18MDMD13M14D", "sequence": "MALIPLCCSLSMAAHLSPSSPFLRHDNSAPSAAIFAFRASWSADDWLLAGTGSPFGEREIDAALFPWIKSVGNDTTAAVNGAFLRSFKKVLDTSRLQAEMVGLHLTKLKPPIRCVHAAVADKKQIVFTGHSSGGSIAVLAAIWFLEQRQNFEGRGGQVDPFCVTFGSPLVGDGVFVHALQRENWARFFLHFVMAADIIPRCLLAPLSSFKDELEAILGFLCPKPLLFSPNTVMSSPVTYYRNVLGHALSVSNHQACLLMGCTNPLLEVLTGFVKLTPYRPVGAYVLCSRDGRLLCLRNSNSILHMLFYLFQDVPGADVEEVAHRSLEAHRLYEAMTRDHLNVQNILSVDSSDSIPLTFTNGFDDKAQPVKTLLKDLDLSLEARLCLRAAAEWEKQRLRNQAKIDDNYSKIKEALSFLSDYRATCEVRGLGYYDTFKLQKDVEDFNANVKRLELAGLWDEIVEMLSRYELPDGFEGRQEWVKLGTQYRWLVEPLDIANYYRHSKNEDTGPYMVKGRPRRYRYTQRWLEHAERSPAGTCTESCFWASVEELCIDTGDGKPFLELRSRVVELEREVLRWVTKGSLGRDVFVSESTFARWWVTLPRQHRADSCIARFVNGEDINLTAITITQTIRHDHIFKWFDLNL", "taxon_id": 214687, "system_name": "musa_acuminata", "assembly": "MA1", "left_index": 389, "right_index": 390, "representative": { "id": "GSMUA_Achr8G25290_001", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 28, "end": 230, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345190, "distance_to_parent": 0.188623, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4479, "node_taxon": "Poaceae", "left_index": 307, "right_index": 388, "children": [ { "node_id": 6345242, "distance_to_parent": 0.054572, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 147369, "node_taxon": "Panicoideae", "left_index": 378, "right_index": 387, "children": [ { "node_id": 633723, "distance_to_parent": 0.040507, "protein_stable_id": "Si029210m", "gene_stable_id": "Si029210m.g", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K3ZRI0]", "cigar": "950DM14D14M12D8M82D4M41D7M112D6M2D27M22D13M16D3MD12M7D11M12D17M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M8D15M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPTDTPAPPQRAASLSDDDRLLVAHCAELSFPSPSPASAPAAASSSARSFQVHHASHPYPCAAFAFAPSWSAADWAAPSSAGGARQPFGDAEVDPALFPSLRAVGSGVPARANAAFLAAFRGLLDGSTLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLEKCTRQGSVNQAHPFCVTFGAPLIGDNIFNHAVRREGWSQCILHFLLPLDIVPRIPLTPLASFREEIQAVLDWLSPQTPNNSPAGRSLVIPEYYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIDLSPYRPCGTYHFLTSSEQLIVITNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWQYEPIKQCMPDIVCVDYLGAISSTVPGRQTDRAAFGSIELSKEAILHLSAAAQWEKQRQRNQTKIDESCQKIQEALRSLNDYKRACELRGVTYYDSFKLQREVHDFNANVRRLELAGLWDEIIEMLRRRELPDGFEAREEWVGLGTLFRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQRWHEQLQRAPVGSSLESCFWAVVEELQAEMAGGRTFQDLRDRVVKLESDAHGWYNSGSLGKDVFLGSSSFVAWWRTLPEQHKSASCIAKLVSL", "taxon_id": 4555, "system_name": "setaria_italica", "assembly": "JGIv2.0", "left_index": 385, "right_index": 386, "representative": { "id": "Si029210m.g", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 63, "end": 224, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345246, "distance_to_parent": 0.029859, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 147429, "node_taxon": "Andropogoneae", "left_index": 379, "right_index": 384, "children": [ { "node_id": 633701, "distance_to_parent": 0.048386, "protein_stable_id": "Sb02g024030.1", "gene_stable_id": "Sb02g024030", "gene_description": "Putative uncharacterized protein Sb02g024030 [source:UniProtKB/TrEMBL;Acc:C5XC32_SORBI]", "cigar": "965D14M13D7M82D4M41D7M122D25M22DM4D8M16D16M7D11M12D17M118D4M18DMD11M440D2MD2M2D3MD11M8D15M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPADSAPSSAASLSEDDRLLVAHCAALCFPCSSPTAAASFQVHHASHPYPCAAFAFPPSWSAADWMGGDGGRAPFGDAEVDPALFPSLRAVGSGIPARTNAAFLGAFRRLLDGSTLQSELDPQQQLLDAAARSLSAHWQYEPIKECMQDIICVDYLGTISSTLPGRQTDRATIGSTELSREAVLHLSAAAQWEKQRQRNQTKIDESCQKIQEALGSLNEYKRSRELCGVSYYDSFKLQREVHDFNANVRRLELAGLWDEIVEMLRRRELPDGFEAREEWVSLGTLFRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWHEQLQRAPVGSSLESCFWAVVEELQAEMADGRAFEDLRDRVVKLENDAHGWYNSGSLGKDVFLGSSSFVAWWRRLPEQHRSASSIAKLVSL", "taxon_id": 4558, "system_name": "sorghum_bicolor", "assembly": "Sorbi1", "left_index": 382, "right_index": 383, "representative": { "id": "Sb02g024030", "score": 0 }, "domains": [] }, { "node_id": 633717, "distance_to_parent": 0.018269, "protein_stable_id": "GRMZM2G045716_P01", "gene_stable_id": "GRMZM2G045716", "gene_description": "EDS1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:B4FPY6]", "cigar": "965D14M13D7M82D4M41D7M113D5M2D27M22DM4D8M16D16M7D11M12D17M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M8D15M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPTDSAPPNAASLSEDDRLLVAHCATLSFPSSSPTAAAATTHSASSFQVHHASHPYPCAAFVFPPSWSAADWMGGDGGHPPFGDAEVDPALFPSLRAVGSGIPARTNAAFLGNFRRLLDGSTLQSEVSRAVAEEKRVVFTGHSSGGSIATLAAIWFLEKCTRRGSVNQAHPFCVTFGAPLIGDNIFNHAVKREGWSQCILHFLLPLDIVPRIPLTPLASFREETQAVLDRLSSQTPNNSPAGRSLVIPEYYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIDLSPYRPCGTYHFLTSSEQLIVLANSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWQYEPIKYCIQDIVCVDYLGTISSAVPGRQAGRVALGSIELSREAILHLSAAAQWEKQRQRNQTKIDESCQKIQEALRSLNEYKRSRELDGVSYYDSFKLQREVHDFNANVKRLELAGLWDEIVEMLRRRELPDGFEAREEWVSLGTLFRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWHEQLQRVPVGSSLESCFWAVVEELQAEMADGRAFEDLRERLVKLENDAHGWYNSGSLGKDVFLGSSSFVAWWRTLPEQHRAASSIAKLVSL", "taxon_id": 4577, "system_name": "zea_mays", "assembly": "AGPv3", "left_index": 380, "right_index": 381, "representative": { "id": "GRMZM2G045716", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 62, "end": 218, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GRMZM2G045716", "score": 0.018269 } } ], "representative": { "id": "Si029210m.g", "score": 0.040507 } }, { "node_id": 6345192, "distance_to_parent": 0.029425, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 359160, "node_taxon": "BEP clade", "left_index": 308, "right_index": 377, "children": [ { "node_id": 6345195, "distance_to_parent": 0.051389, "node_type": "speciation", "bootstrap": 68, "node_taxon_id": 147380, "node_taxon": "Oryzeae", "left_index": 331, "right_index": 376, "children": [ { "node_id": 633804, "distance_to_parent": 0.037874, "protein_stable_id": "LPERR09G06260.1", "gene_stable_id": "LPERR09G06260", "cigar": "900D100M81D4M41D7M123D24M22D13M16D4MD11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MNEHYGFVIAVVVPATAHEGEGSKLLLPNNGHGQYYHQTTPILPINSVLKRKKKIQTLHLHTGAESTVNTPPPPTSKLAATPLKTMPAAAALSDDDRLVVAHCAALSFPTSPPSSSSFQVHHASHPYPCAAFAFPPSWSAGGGGWAASASPGAGAFGDAKVDPSLFPSLRSVGSGVPARANAAFLAAFRALLDGSPLQSEVSRAVAEEKRIIFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPLDIIPRIPLTPLASVTEGIQAVLDWLSPHTPNFSPSGVPLIITQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFMTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLCDAAERSLSAHWQYEPIKQSMTQEIVCVDYLGVISSTLPGRQMSSTTVGGLDVSKEAMLSLSAAGQWEKQRETNQAKIDGANCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRKRELPDGFEGRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLENDAHGWFLSGCLGKDIFLSRSSFVMWWKTLPEKHRSASCIAKLVPW", "taxon_id": 77586, "system_name": "leersia_perrieri", "assembly": "Lperr_V1.4", "left_index": 374, "right_index": 375, "representative": { "id": "LPERR09G06260", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 158, "end": 292, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345197, "distance_to_parent": 0.003849, "node_type": "speciation", "bootstrap": 36, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 332, "right_index": 373, "children": [ { "node_id": 633711, "distance_to_parent": 0.030969, "protein_stable_id": "OB09G15920.1", "gene_stable_id": "OB09G15920", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:J3MX63]", "cigar": "1126D7M272DM6DM47D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MVSRAVAEEKRIIFTGHSSGGSIATLSAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDHTFNHAVRREGWSQCILHFVMPVDIIPRIPLTPLSSVTEGIQAVLDWLSPHTPNFSPSGVTPTITQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVVTNSDAVLQLLFYCLQLDPQQQLRDAAERSLNAHWQYEPIKQIMMQEIVCVDYLGLVSSTIPGRQMSGTAVGGLELSKEAMLSLSAAGQWEKQRETNQAKLDGASCTKIREVLKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVRRLELAGLWDEIVEMLRKRELPDGFEGRQDWVSLGTMYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQHISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVAKLESDAHGWFMSGSLGKDVFLSCSSFVIWWKTLPEKHRSASCIAKLVPW", "taxon_id": 4533, "system_name": "oryza_brachyantha", "assembly": "Oryza_brachyantha.v1.4b", "left_index": 371, "right_index": 372, "representative": { "id": "OB09G15920", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 5, "end": 93, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345200, "distance_to_parent": 0.014066, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 333, "right_index": 370, "children": [ { "node_id": 633698, "distance_to_parent": 0.014959, "protein_stable_id": "OPUNC09G07600.1", "gene_stable_id": "OPUNC09G07600", "cigar": "970D9M13D7M82D4M41D7M111D7M2D27M26D9M16D16M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D11MDM32D", "sequence": "MPAAAAALSDDDRLVVAHCAALSFPPPPAAAAATQPPPSPPSSFQVHHASHPYPCAAFAFPPSWSAPGWAAAAAGRAAFGDAEVDPSLFPSLRSIGSGVPARANAAFLAAFRALLDDSPLQSEVSRAVAEEERIIFTGHSSGGAIATLASIWFLETCTRRGSVNQAHPFCVTFGTPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPHTPNFSPSGIPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSHAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGANCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFHANVTRLELAGLWDEIVEMLRRRELPDGFEGRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRQRVVKLESDAHGWFMSGSLGKDIFLSRSSFVIWWKTLPEKHRSASCIAKLVP", "taxon_id": 4537, "system_name": "oryza_punctata", "assembly": "AVCL00000000", "left_index": 368, "right_index": 369, "representative": { "id": "OPUNC09G07600", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 215, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345203, "distance_to_parent": 0.004098, "node_type": "dubious", "bootstrap": 0, "duplication_confidence_score": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 334, "right_index": 367, "children": [ { "node_id": 6345205, "distance_to_parent": 0.008404, "node_type": "speciation", "bootstrap": 2, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 341, "right_index": 366, "children": [ { "node_id": 633756, "distance_to_parent": 0.089083, "protein_stable_id": "KN541355.1_FGP002", "gene_stable_id": "KN541355.1_FG002", "cigar": "424D688M13D126M2D62M16D4MD11M7D52M6DM24D18M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M5D10M2D6M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MGPAAGYTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKAWEEEAELEYTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTNIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTSVCLKDEKGETASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTNIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTNIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTNIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKGEEIIAIVPWDEWWAMALKDSSNPQIALLPLHPDVRARFNESAAWDYAQSMVGKPYGYHNMIFSWIDTIGDNYPPPLDANLVMAVMSMWTRLQPLYAANMWNEALNKRLGTEGLDLHGIIVETERRGMSFDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFAPFAESLQVTEFTIRDAYMLKIFEDNQARLPSWCNTESDKLPFCQILGEYRMELPEYNTIEPCLIDRSFHTRTCLSVKPSIWVKWSIFILKTKITSIVHFASLFRALVGKKNDNLDMVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQREINQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVRRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 4528, "system_name": "oryza_longistaminata", "assembly": "GCA_000789195.1", "left_index": 364, "right_index": 365, "representative": { "id": "KN541355.1_FG002", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 937, "end": 1046, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345206, "distance_to_parent": 0.001891, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 342, "right_index": 363, "children": [ { "node_id": 633749, "distance_to_parent": 0, "protein_stable_id": "OGLUM09G09310.1", "gene_stable_id": "OGLUM09G09310", "cigar": "971D8M13D7M82D4M41D7M106D12M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM25D17M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFRALLDGSPLQSEEKKNDSLDMVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIFGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 40148, "system_name": "oryza_glumaepatula", "assembly": "ALNU02000000", "left_index": 361, "right_index": 362, "representative": { "id": "OGLUM09G09310", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 104, "end": 227, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345207, "distance_to_parent": 0, "node_type": "dubious", "bootstrap": 0, "duplication_confidence_score": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 343, "right_index": 360, "children": [ { "node_id": 633828, "distance_to_parent": 0.003527, "protein_stable_id": "ONIVA11G09970.1", "gene_stable_id": "ONIVA11G09970", "cigar": "971D8M13D7M82D4M41D7M105D13M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM25D17M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPPAAALSDDDRLVVAHCAALSFPPASQPPPPPTTSSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAPGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFRALLDGSPLQSEEKKNDNLDMVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSRCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPL", "taxon_id": 4536, "system_name": "oryza_nivara", "assembly": "AWHD00000000", "left_index": 358, "right_index": 359, "representative": { "id": "ONIVA11G09970", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 105, "end": 228, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345210, "distance_to_parent": 0.005668, "node_type": "speciation", "bootstrap": 21, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 344, "right_index": 357, "children": [ { "node_id": 633753, "distance_to_parent": 0.012143, "protein_stable_id": "OMERI09G07140.2", "gene_stable_id": "OMERI09G07140", "gene_display_label": "OMERI09G07140", "cigar": "999M82D28M17D125M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MAAARHRGGGTHAAPLLLVVLLLLSMGRLPRAAAVGLGGGLGELMTKVPFSPGDVLPVLPRQVSWPVMNTLHSAVDLLPSFVAAVAPGAAPSDAAWSGACFARNEAALELTPGDRNGTELGGAVLRLKTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTTIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKGEEIIAIVPWDEWWAMALKDSSNPQIALLPLHPDLRARFNESAAWDYARSMVGKPYGYHNMIFSWIDTIGDNYPPPLDANLVMAVMSMWTRLQPLYAANMWNEALNKRLGTEGLDLHGIIVETERRGMSFDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFTPFAESIQVTEFTIRDAYMLKIFEDNQARLPSWCNTESDKLPFCQILGEYRMELPEYNTIEPYAKMNENCPSLPPTYKRPALFTRKKGDPQVPFSPGDVLPVLPRQVSWPVMNTLHSAVDLLPSFVAAVAPGAAPSDAAWSGACFARNEAALELTPGDRNGTELGGAVLRLKTASAKSWTCMDLYVFATPYRITWDYYFAAREHTLEIKSWEEEAELEYVKQHGISVFLMPSGMLGTLLSLIDVLPLFSNTGWGQHSNLAFLEKHMGASFEKRSQPWVTTIRKEDIHSGDFLALSKIRGRWGAFETLEKWVTGAFAGHTAVCLKDEKGEVWVAESGFENEKGEEIIAIVPWDEWWAMALKDSSNPQIALLPLHPDLRARFNESAAWDYARSMVGKPYGYHNMIFSWIDTIGDNYPPPLDANLVMAVMSMWTRLQPLYAANMWNEALNKRLGTEGLDLHGIIVETERRGMSFDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFTPFAESIQVTEFTIRDAYMLKIFEDNQARLPSWCNTESDKLPFCQILGEYRMELPEYNTIEPYAKMNENCPSLPPTYKRPARCQPRRTSAKGSKLPHCDKQHTPTHHTTPPVRARAAAANVPSDRAKRVTRHTVTDATRSRSPTMPAAAALSDDDRLVVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFRALLDGSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQSQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 40149, "system_name": "oryza_meridionalis", "assembly": "Oryza_meridionalis_v1.3", "left_index": 355, "right_index": 356, "representative": { "id": "OMERI09G07140", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 1212, "end": 1332, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345213, "distance_to_parent": 0.001403, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 345, "right_index": 354, "children": [ { "node_id": 633839, "distance_to_parent": 0.000704, "protein_stable_id": "BGIOSGA030701-PA", "gene_stable_id": "BGIOSGA030701", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A2Z0X6]", "cigar": "971D8M13D7M82D4M41D7M106D12M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPASQPPPLPTTSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFGALLDGSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNNAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLHDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQSQRISFGSSLESCFWAMAEELQAEIANGKTFDDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 39946, "system_name": "oryza_indica", "assembly": "ASM465v1", "left_index": 352, "right_index": 353, "representative": { "id": "BGIOSGA030701", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 102, "end": 218, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345215, "distance_to_parent": 0, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 346, "right_index": 351, "children": [ { "node_id": 633818, "distance_to_parent": 0, "protein_stable_id": "OS09T0392100-01", "gene_stable_id": "OS09G0392100", "gene_description": "Os09g0392100 protein; Putative EDS1; cDNA clone:J023007E18, full insert sequence [Source:UniProtKB/TrEMBL;Acc:Q6H415]", "cigar": "971D8M13D7M82D4M41D7M106D12M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFGALLDGSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNNAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQSQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 39947, "system_name": "oryza_sativa", "assembly": "IRGSP-1.0", "left_index": 349, "right_index": 350, "representative": { "id": "OS09G0392100", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 218, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633742, "distance_to_parent": 0, "protein_stable_id": "ORUFI09G09780.1", "gene_stable_id": "ORUFI09G09780", "cigar": "971D8M13D7M82D4M41D7M106D12M2D27M26D9M16D4MD11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCAAFAFPPSWSAAPGWAAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFGALLDGSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNNAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFSPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGASCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVSRLELAGLWDEIVEMLRRRELPDGFESRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQSQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWSMSGSLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVPW", "taxon_id": 4529, "system_name": "oryza_rufipogon", "assembly": "PRJEB4137", "left_index": 347, "right_index": 348, "representative": { "id": "ORUFI09G09780", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 101, "end": 218, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "OS09G0392100", "score": 0 } } ], "representative": { "id": "OS09G0392100", "score": 0 } } ], "representative": { "id": "OS09G0392100", "score": 0.001403 } } ], "representative": { "id": "ONIVA11G09970", "score": 0.003527 } } ], "representative": { "id": "OGLUM09G09310", "score": 0 } } ], "representative": { "id": "OGLUM09G09310", "score": 0.001891 } }, { "node_id": 6345223, "distance_to_parent": 0.00465, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 335, "right_index": 340, "children": [ { "node_id": 633770, "distance_to_parent": 0, "protein_stable_id": "OBART09G09050.1", "gene_stable_id": "OBART09G09050", "cigar": "971D8M13D7M82D4M41D7M101D17M2D27M26D9M16D2M3D11M7D13M12D15M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D11MDM32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPPAAAQQPPPPPSTSSSSSGAGAGAGASFQVHHASHPYPCAAFAFPPSWSAPGWAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFRALLDDSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFLPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGANCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVRRLELAGLWDEIVEMLRRRELPDGFEGRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWFMSESLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVP", "taxon_id": 65489, "system_name": "oryza_barthii", "assembly": "ABRL00000000", "left_index": 338, "right_index": 339, "representative": { "id": "OBART09G09050", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 100, "end": 221, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633795, "distance_to_parent": 0, "protein_stable_id": "ORGLA09G0067400.1", "gene_stable_id": "ORGLA09G0067400", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1QNP5]", "cigar": "971D8M13D7M82D4M41D7M101D17M2D27M26D9M16D2M3D11M7D13M12D15M3D3MD5M6DM26D16M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMD2M2D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D11MDM32D", "sequence": "MPAAAALSDDDRLVVAHCAALSFPPPAAAQQPPPPPSTSSSSSGAGAGAGASFQVHHASHPYPCAAFAFPPSWSAPGWAAGRAAFGDAEVDPSLFPSLRSVGSGVPARANAAFLASFRALLDDSPLQSEVIVCFELQVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLETCTRRGSVNQAHPFCVTFGAPLVGDNTFNHAVRREGWSQCILNFVVPVDIIPRIPLTPLASATEGIQAVLDWLSPQTPNFLPSGMPLIISQFYENLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSSEQLAVLTNSDAVLQLLFYCLQLDPQQQLRDAAERSLSAHWQYEPIKQSMMQEIVCVDYLGVVSSTLPGRQMSSTIVGGLELSKEAMLSLSAAGQWEKQRETNQAKIDGANCTKIREALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNANVRRLELAGLWDEIVEMLRRRELPDGFEGRQDWVNLGTLYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQEWHEQLQRISFGSSLESCFWAMAEELQAEIANGKTFEDVRDRVVKLESDAHGWFMSESLGKDIFLSRSSFVIWWKTLPENHRSASCIAKLVP", "taxon_id": 4538, "system_name": "oryza_glaberrima", "assembly": "AGI1.1", "left_index": 336, "right_index": 337, "representative": { "id": "ORGLA09G0067400", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 107, "end": 229, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "OBART09G09050", "score": 0 } } ], "representative": { "id": "OBART09G09050", "score": 0.00465 } } ], "representative": { "id": "OBART09G09050", "score": 0.008747999999999999 } } ], "representative": { "id": "OBART09G09050", "score": 0.022814 } } ], "representative": { "id": "OBART09G09050", "score": 0.026663 } }, { "node_id": 6345227, "distance_to_parent": 0.023559, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 147368, "node_taxon": "Pooideae", "left_index": 309, "right_index": 330, "children": [ { "node_id": 633791, "distance_to_parent": 0.091015, "protein_stable_id": "BRADI4G29600.1", "gene_stable_id": "BRADI4G29600", "cigar": "1337D5M12D11M13D16M10D2M6DM47D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MLYGRHIVYELCTTQQIQPCMHQSRVQVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLENCTRRGSVNQAQPFCVTFGAPLVGDNIFNHAVRREGWSQCILHFVMPLDIVPRIPLTPLASSREQIQSVLDWLSPHSPNYSPVGNSLVIPEFYETLLRSTLSIASYEACSLMGCTSSILGTLTSFIELSPYRPCGTYLLLTSTEQLIVLTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWQYESIKQCVMQEIVCVDYLGAISSSLPGRQMNGTTIGGLELSKEAMLGLAAAGQWEKQRERNQAKIDANCSKIQEAIRSLNEYKRTCELHGVSYYDSFKLQREVHDFNSNVRRLELAGLWDEIIEMLRRRELPDVFEGREEWVNLGTMYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWHEQSKRIPFGSSLESCFWAMSEELQAEMINGKSFEDLKDRVCKLESDTLGWFTSGNLGKDVFLSSSSFVIWWKTLPEQQRSASCIARLMPP", "taxon_id": 15368, "system_name": "brachypodium_distachyon", "assembly": "v1.0", "left_index": 328, "right_index": 329, "representative": { "id": "BRADI4G29600", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 22, "end": 170, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345229, "distance_to_parent": 0.031416, "node_type": "speciation", "bootstrap": 98, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 310, "right_index": 327, "children": [ { "node_id": 633777, "distance_to_parent": 0.012878, "protein_stable_id": "MLOC_67615.1", "gene_stable_id": "MLOC_67615", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0YBP8]", "cigar": "965D14M13D7M82D4M41D7M113D2M6D26M14DM8D12M16D4MD11M7D11M12D17M3D3MD5M6DM29D8M10D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPMDTPPPRGAALSDDDRLLVAHCAGLSFPSASRSPPSATASFQVHHASHPYPCAAFVFPPTWSAAGWMPPSLDAGGRAPFGDAEVDPALFPSLRSVGSGVPARASAAFVAAFRGLLDGSPLQTEVSKAVAEEKRVVFTGHSSGGSIATLAAIWFLENCTRRGSVNQAQPFCVTFGAPLVGDNVFNHAVRREGWSQCILHFIMPLDIIPRIPLAPLASSREQIQSVLDWLSPHSPNFSPVGNSLVIPEFYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSTEQLVILTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWQYESIKQNMMQEVVCVDYLRAISSSLPGTQMNGIAIGGLELSKEAMLSLAAAAQWEKQREINQAKIDANCSKIQEALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNSNVRRLELAGLWDEIIEMLRRRELPDAFEGREEWVNLGTSYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWREQSHRIPLGSSLESCFWAMSEELQAEMINGKSFEDLKDRVGKLESDALGWFTSGTLGKDVFLSSSSFVIWWKTLPEQHRSASCIARLVPS", "taxon_id": 112509, "system_name": "hordeum_vulgare", "assembly": "082214v1", "left_index": 325, "right_index": 326, "representative": { "id": "MLOC_67615", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 100, "end": 217, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345231, "distance_to_parent": 0.009913, "node_type": "speciation", "bootstrap": 65, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 311, "right_index": 324, "children": [ { "node_id": 6345233, "distance_to_parent": 0.0657, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4564, "node_taxon": "Triticum", "left_index": 318, "right_index": 323, "children": [ { "node_id": 633719, "distance_to_parent": 0.007776, "protein_stable_id": "TRIUR3_21270-P1", "gene_stable_id": "TRIUR3_21270", "gene_description": "Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Source:UniProtKB/TrEMBL;Acc:M7Y6H3]", "cigar": "860D119M14D6M82D31M13D126M2D27M3D32M16D4MD14M4D11MD40M6DM25D17M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MSTTARGGYQYFVTFTDDLSRYGYIYLMRHKSETFERFREFQNEVENQLGKTIKLLRSDRGGEYMSQDFDDHLKSRESDEPATYAEVMVSPDSEAWLEAMRSELKSMDENQVWDLVDLLPGITAIGCKWVFKKKTDVDGNVQIHKARLVAMGYGQVQGIDYDETYSPVAMLKSLSGSSIVFLILYVDDILLIGNDISMLNSAKESLNGKFSMKDLGEAMYILGIKIYRDRSRRLLGLSQSTLTSRYQANPGENHCAEVKTTLKYLIRTKEMFLVSGGGEDLVVRGYADASFQTDRDDCRSQSRFVYVMNGGAVSWMSSKQDTVVDSTTEAEYIAACEAAKEGVWIRNFLDDLGIFPASVKPLDFYCDNSGAIAQAKEPKNHHKTHIIHMRYTDDMKGHALPPSHKWPYQSRFYLMDVHNMVSKAVAEEKRVVFTGHSSGGSIATLAAIWFLENCTRRGSVNQAQPFCVTFGAPLVGDNVFNHAVRREGWSQCILHFIMPLDIIPRIPLAPLASSREQIQSVLDWLSPHSPNFSPVGNSLVIPEFYETLLRSTLSIASHEACSFMGCTSSILGTLTYFIELSPYRPCGTYLFLTSTDQLIVLTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWEYESIKQSVMQEIGCVDYLRAISSSLLGTQMNGTAIGGLELSKEAMLSLAAAAQWEKQREINQAKIDANCSKIQEALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNSNVRRLELAGFWDEIIEMLRRRELPDAFEGREEWVNLGTSYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWREQSHRIPLGSSLESCFWAMSEELQAEMINGKSFEDLKDRVGKLESDALGWFTSGNLGRDVFLSSSSFVIWWKTLPEQHRSASCIARLVPS", "taxon_id": 4572, "system_name": "triticum_urartu", "assembly": "GCA_000347455.1", "left_index": 321, "right_index": 322, "representative": { "id": "TRIUR3_21270", "score": -100 }, "domains": [ { "interpro": "IPR012337", "start": 6, "end": 75, "name": "RNaseH-like_dom", "id": 12337 }, { "interpro": "IPR013103", "start": 110, "end": 173, "name": "RVT_2", "id": 13103 }, { "interpro": "IPR029058", "start": 345, "end": 359, "name": "AB_hydrolase", "id": 29058 }, { "interpro": "IPR029058", "start": 394, "end": 512, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633736, "distance_to_parent": 0.000912, "protein_stable_id": "Traes_5AL_737DE6F9D.1", "gene_stable_id": "Traes_5AL_737DE6F9D", "cigar": "1538D16M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPLDIIPRILLAPLASSREQIQSVLDWLSPHSPNFSPVGNSLVIPEFYETLLRSTLSIASYEACSFMGCTSSILGTLTYFIELSPYRPCGTYLFLTSTDQLIVLTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWEYESIKQSVMQEIGCVDYLRAISSSLLGTQMNGTAIGGLELSKEAMLSLAAAAQWEKQREINQAKIDANCSKIQEALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNSNVRRLELAGFWDEIIEMLRRRELPDAFEGREEWVNLGTSYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWREQSHRIPLGSSLESCFWAMSEELQAEMINGKSFEDLKDRVGKLESDALGWFTSGNLGRDVFLSSSSFVIWWKTLPEQHRSASCIARLVPS", "taxon_id": 4565, "system_name": "triticum_aestivum", "assembly": "IWGSC1.0+popseq", "left_index": 319, "right_index": 320, "representative": { "id": "Traes_5AL_737DE6F9D", "score": 0 }, "domains": [] } ], "representative": { "id": "TRIUR3_21270", "score": -99.992224 } }, { "node_id": 6345238, "distance_to_parent": 0.00341, "node_type": "speciation", "bootstrap": 65, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 312, "right_index": 317, "children": [ { "node_id": 633832, "distance_to_parent": 0.03906, "protein_stable_id": "Traes_5DL_9E18D52F1.1", "gene_stable_id": "Traes_5DL_9E18D52F1", "cigar": "1263D17M56D9M34D15M10D2M6DM47D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MLSSYQQSDSLAIVNFSVTAFSPERKVVFFYRFVLQVSKAVAEEKRVVFTGHSSGGSIATLAAIWFLENCTRRGSVNQAQPFCVTFGAPLVGDNVFNHAVRREGWSQCILHFIMPLDIIPRIPLAPLSSSREQIQSVLDWLSPHSPNFSPVGNSLVIPEFYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSTDQLIILTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWEYESIKQSVMQEIGCVDYLRAISSSLPGRQMNGTAIGGLELSKEAMLSLAAAAQWEKQREINQAKIDANCSKIQEALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNSNVRRLELAGFWDEIIEMLRRRELPDAFEGREEWVNLGTSYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWREQSHRIPLGSSLESCFWAMSEELQAEMINGKSFEDLKDRVGKLESDALGWFTSGNLGRDVFLSSSSFVIWWKTLPEQHRSASCIARLVPS", "taxon_id": 4565, "system_name": "triticum_aestivum", "assembly": "IWGSC1.0+popseq", "left_index": 315, "right_index": 316, "representative": { "id": "Traes_5DL_9E18D52F1", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 128, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633739, "distance_to_parent": 0.000919, "protein_stable_id": "EMT14195", "gene_stable_id": "F775_07041", "cigar": "965D14M13D7M82D4M41D7M113D5M2D27M14DM8D12M16D4MD11M7D11M12D17M3D3MD5M6DM5D37M5D2MD21M5D22MD11MD11MD18M13DMD20M11D35M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM6D2M2D2M6D15M44D14M3D2M2DM3DM11D2M3D2MDMDM3D5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD3M29D13M32D", "sequence": "MPMDTSPPRGAALSDDDRLLVAHCAALSFPSASRSPPSAAAASSASFQAHHASHPYPCAAFVFPPTWSAAAWMPSSLDAGGRAPFGDAEVDPALFPSLRSVGSGVPARASAAFVAAFSGLLDGSPLQTESDSLAIVNFSVTAFSPERKVVFFYRFVLQVSKAVAEEKRVVFTGHSSGGSIATLAAIWFLENCTRRGSVNQAQPFCVTFGAPLVGDNVFNHAVRREGWSQCILHFIMPLDIIPRIPLAPLSSSREQIQSVLDWLSPHSPNFSPVGNSLVIPEFYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIELSPYRPCGTYLFLTSTDQLIILTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWEYESIKQSVMQEIGCVDYLRAISSSLPGRQMNGTAIGGLELSKEAMLSLAAAAQWEKQREINQAKIDANCSKIQEALKSLNEYKRTCELHEVSYYDSFKLQREVHDFNSNVRRLELAGFWDEIIEMLRRRELPDAFEGREEWVNLGTSYRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWREQSHRIPLGSSLESCFWAMSEELQAEMINGKSFEDLKDRVGKLESDALGWFTSGNLGRDVFLSSSSFVIWWKTLPEQHRSASCIARLVPS", "taxon_id": 37682, "system_name": "aegilops_tauschii", "assembly": "GCA_000347335.1", "left_index": 313, "right_index": 314, "representative": { "id": "F775_07041", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 157, "end": 250, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "F775_07041", "score": 0.000919 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.92652399999999 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.91661099999999 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.885195 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.86163599999999 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.83221099999999 } } ], "representative": { "id": "TRIUR3_21270", "score": -99.64358799999998 } }, { "node_id": 6345250, "distance_to_parent": 0.083058, "node_type": "speciation", "bootstrap": 1, "node_taxon_id": 1437201, "node_taxon": "Pentapetalae", "left_index": 196, "right_index": 305, "children": [ { "node_id": 6345253, "distance_to_parent": 0.174528, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 299, "right_index": 304, "children": [ { "node_id": 633835, "distance_to_parent": 0.020779, "protein_stable_id": "Solyc06g071280.2.1", "gene_stable_id": "Solyc06g071280.2", "cigar": "971D8M13D7M3DM79D3M41D7M123D24M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M4D23MD11MD11MD18M13DMD20M9D37M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM5D3M2D2M6D7MD7M44D14M3D2M2DM3DM11D2M3D2M7D17MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D23M15D22M2D6MD18M31D12M31D", "sequence": "MVKIGEGIEVRDELIKKTCNLTMEAHNLSPGKPYIYKKINGSTDVVFAFAGTLSSDGWYSNTSFGEKEINTTLFPSLRSVGTDEVAKVNEVFATRFEEILDKSSLKNEVEKAMLEGRQVVFAGHSSGGAIAILAALWCLECCRTRPNGDMLLHPYCMTFGSPLVGNKIWSHALRRENWARYFLHFVMKYDVVPRMMLAPLSSIQELLQVISPFINPKSQYYQHEAVARSSHASNFFMTVMRSASSVASYDACNLKGCTNLLLETVSNIVQLSPYRPFGTYIFCTGNRKLVVVENPDAVLQLLFYSSQLSSEAEAAVVVPRSLNDHLLYKNEMQDSLEMQDVLHLNNLTDIPLSSNVDPSMNSALNDLGLSTRARLCLRAAGEWEKQKKKNEEKIEQNKRSIRDALSKIQEYQTKCDIRKVGYYDAFKIQNTDDDFNANVRRLELAGIWDEIIEMLKRYELPDSFEGRRDWIELGTQFRRQVEPLDIANYYRHLKNEDTGPYLIRARPKRYRFTQRWLEHFDRVQAGARSESCFWAEVEELRNKPFAQVQDRVLNLETAANGWIQSSLLGDDIFFPESTYTKWWKTLPPQHKQASWVSRKITP", "taxon_id": 4081, "system_name": "solanum_lycopersicum", "assembly": "GCA_000188115.2", "left_index": 302, "right_index": 303, "representative": { "id": "Solyc06g071280.2", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 33, "end": 201, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633741, "distance_to_parent": 0.008321, "protein_stable_id": "PGSC0003DMT400083030", "gene_stable_id": "PGSC0003DMG400033029", "gene_description": "Enhanced disease susceptibility 1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400033029]", "cigar": "1126D5M126D23M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M4D23MD11MD11MD18M13DMD20M9D37M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM6D2M2D15MD7M44D14M3D2M2DM3DM11D2M3D2M7D17MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D23M15D22M2D6MD18M31D12M31D", "sequence": "MEAHKLSPGIPYIYKKIDRSTDVVFAFAGTLSFDGWYSNTSFGETEINTTLFPSLRSVGTDEVAKVNEAFARRFQDILDKSSLKKEVETAMSKGRQVVFAGHSSGGAIAILAALWCLECCRTRPEGDMLVHLYCMTFGSPLVGNKIWSHALRRENWARYFIHFVMKYDIVPRMMLAPLSSIQELLQAISPFINPKSQYSQRDAVARSSNALNFFMTVMRNASSVASYAACNLKGCTNLLLETVSNIVQLSPYRPFGTYIFCTGNRKLVVVENPDAVLQLLFYSSQLSSEAEAAVVGARSLNDHLLYKNEMQDSLEMQDVVHLNNLTDIPLSSNVDLRGEVASMNSALNDLGLSTRARLCLRAAGEWEKQKKKNEEKIEQNKSSIRDALSKIQEYQTKCDIRKVGYYDAFKIQNTEDDFKANVKRLELAGIWDEIIEMLKRYELPDSFEGRRDWIELGTQFRRQVEPLDIANYYRHLKNEDTGPYLIRARPKRYRFTQRWLEHFDKVQAGARSESCFWAEVEELRNKLFAQVQDRVLSLETAANIWIQSSLLGDDVFFPESTYTKWWKTLPPQHKQTSWVSEKITP", "taxon_id": 4113, "system_name": "solanum_tuberosum", "assembly": "3.0", "left_index": 300, "right_index": 301, "representative": { "id": "PGSC0003DMG400033029", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 12, "end": 179, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "PGSC0003DMG400033029", "score": -99.991679 } }, { "node_id": 6345255, "distance_to_parent": 0.023708, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 197, "right_index": 298, "children": [ { "node_id": 6345256, "distance_to_parent": 0.305443, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3700, "node_taxon": "Brassicaceae", "left_index": 264, "right_index": 297, "children": [ { "node_id": 6345259, "distance_to_parent": 0.057658, "node_type": "duplication", "bootstrap": 32, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 275, "right_index": 296, "children": [ { "node_id": 6345262, "distance_to_parent": 0.0671, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 290, "right_index": 295, "children": [ { "node_id": 633841, "distance_to_parent": 0.01889, "protein_stable_id": "Bra018085.1-P", "gene_stable_id": "Bra018085", "gene_description": "AT3G48080 (E=1e-188) | lipase class 3 family protein / disease resistance protein-related ", "cigar": "972D7M13D8M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D28M35D7M11D2MD21M3D24MD11MD11MD18M13DMD17MDM13D34M293D26M3D2MD25M2D2MD2M2D3MD11M7D16M2DMDM20D13M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D23M17D20M2D27M27D12M2DMDM28D", "sequence": "MALEAFAGISNDLITRACMASTRAYNTDHFHKEEERETVFVAVRPSFLEKDWFAPENKSPFGETNMKRAQFPCMRSIGNDVDATVNESFLENFQVLTSPTTSFCDYVKTVVDSRQSQRIVFTGHSTGGATAILATVWYLETYFKKPRGGFPLPEPLCVTFGAPLVGDYVFKHALGRENWSRFFVNFVTRFDIVPRIMLAGKASTKQALPHVLSQLDPRVAIQENDQSIPGFYTTVMKETATVAHQAVCELIGYGDAFLETFSSFLDLSPYRPAGIFVFSTGTGLVSVSNSDAILQILFYASQSSNQDELSLVPFQSIKDHRSYEEMVHSMAMKPLNHLDLHHLPLDGDPILRDLGLSTRARQCVCAAFEAEKQRVDNQTKIYNKLPKIVEKLTWIEDEYKPRCKTHKNGYYDSFKYSNEEKDFKANVSRAELAGLFDEVLGLVKKGLLPDGFEGHREWIELSTRYRRLIEPLDISNYHRHLKNEDTGPYMRKGRPNRYKHAQRGYEHELLKAGKSAEEIKESGCGSCFWADVEELKGKAYESVEVKRFEKLVEGWIANREIDDEQIFLEGSTFRKWWHSLPEEHKRSSLLRERMAETRST", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 293, "right_index": 294, "representative": { "id": "Bra018085", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 34, "end": 202, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633830, "distance_to_parent": 0.015708, "protein_stable_id": "Bo8g076630.1", "gene_stable_id": "Bo8g076630", "cigar": "970D9M15D6M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M38D10M5D2MD21M3D24MD11MD11MD18M13DMD17MDM13D34M293D26M3D2MD25M2D2MD2M2D3MD11M7D16M2DMDM20D13M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D23M17D20M2D21MD5M28D14MDM28D", "sequence": "MALEALAGITNDLITRSWKASTRAYNTDHFHKEEERETVVVAFAPSFSEKDWIAPENKSPFGETKMKRAQFPCMRSIGNDVDATVNESFLKNFQVLTSPTTSFCDYVKTVVDSRQSQRIVFTGHSTGGATAILATVWYLETYFKKPRGGFPLPEPLCMTFGAPLVGDYVFKHALGRENWSRFFVNFVTRFDIVPRIMLARKASTKQALPRVLSQLDPRVAIQENDQSIPVFYTTVMKETATVAHQAVCELIGYGDAFLETFSSFLDLSPYRPAGIFVFSTGTGLVSVSNSDAILQILFYASQSSNQHELSLVPFQSIKDHRSYEEMVHSMAMKPLNHLDLHHLPLDGDPMLRDLGLSTRARQCVCAAFEAEKQRVDNQTKIYNKLPKIVEKLAWIEDEYKPRCKTHKVGYYDSFKYSNEEKDFKANVSRAELAGLFDEVLGLVKKGLLPDGFEGHKEWIELSTRYRRLIEPLDISNYHRHLKNEDTGPYMLKGRPNRYKHAQRGYEHELLKAGKSSEEIEESGCGSCFWADVEELKGKAYESVEVKRFEKLVEGWITNREIDDEQIFLDGSTFRNWWRSLPEEHKRSSLLRERMGETRST", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 291, "right_index": 292, "representative": { "id": "Bo8g076630", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 33, "end": 232, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bo8g076630", "score": 0.015708 } }, { "node_id": 6345266, "distance_to_parent": 0.019968, "node_type": "duplication", "bootstrap": 32, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 276, "right_index": 289, "children": [ { "node_id": 6345269, "distance_to_parent": 0.078804, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 283, "right_index": 288, "children": [ { "node_id": 633780, "distance_to_parent": 0.056307, "protein_stable_id": "Bo1g073560.1", "gene_stable_id": "Bo1g073560", "cigar": "970D9M13D8M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M35D7M11D2MD21M10D17M7D5MD11MD18M13DMD19M13D35M292D26M4D27M2D2MD2M2D3MD11M7D16M2DMDM18D7MD7M44D14M3D2M2DM3D14M3D2MD4M2D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D12M149D", "sequence": "MAQEPLAVAGISNDLVTRSWMASKIAYNTEHFCEEEEGELVYFSFKPSFSEKDWFAPENGSSFGETKMNRDQFPCMRSFSNDVDATVNEAFLKNLDNLISQRTSFRDDVVSSQKCQRIVFTGHSSGGATAILATVWYLETYFTKKQIGGFPFPEPRCHALVRENWSRFFVNYVTRFDIVPRIMLAPKASTKQTLPYPLYKLDHTASRIQENDQGTAGFFAAVMKDVEIASRQAGWELIGDGGNAFLETFSSFLELSPYRPAGTFVFSTGTRLVQVRNSDAILQLLFYASQSSNEQELSLRPYESIQDHRSYQEMVDSMGTKEVNQLELHHLALDGGESALSDLGLSTNDRKCLLAAYEAEKKRVDNQSKMDKEREYKTEEKMDKEKKPKKIEEKDWIENVYKPRCLALAKGYYDSFKESPEDDDFTANVTRAELAGSFDKVFGLLKKGQLPNGFEGRSEWIELQIRYVKLVEPLDIANYHRHLKNEDTGPYMGKGRPNRYKHAQRLFEHKLLKAGRPAKEIKTSSLGSCF", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 286, "right_index": 287, "representative": { "id": "Bo1g073560", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 188, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633778, "distance_to_parent": 0.010835, "protein_stable_id": "Bra033775.1-P", "gene_stable_id": "Bra033775", "gene_description": "AT3G48090 (E=3e-194) EDS1 | EDS1 (enhanced disease susceptibility 1); lipase/ signal transducer/ triacylglycerol lipase ", "cigar": "970D9M13D8M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M35D7M11D2MD21M2D25MD11MD11MD18M13DMD19M13D36M291D26M4D27M2D2MD2M2D3MD11M7D16M2DMDM18D7MD7M44D14M3D2M2DM3DM11D2M3D2M2D3M2D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D23M17D20M2D21MD5M29DMD9M32D", "sequence": "MAQEALAVAGISNDLVTRSWMASKIAYNTEHFCKEEEGELVYFSFKPSFSEKDWFAPENGSSFGETKMNREQFPCMRSFSNDVDATVNEAFLKNLDILISQRTSFRDDVVSSQKCKRIVFTGHSSGGATAILATVWYLETYLTKKQIGGFPFPEPLCVTFGAPLVGDNVFKHALGRENWSRFFLNLVTRFDIVPRIMLAPKASTKQTLPYALYKLDDTASRIQENDQGIAGFFAAVMKDVEIASRQAGCELIGDGGGNAFLETFSSFLELSPYRPAGTFVFSTGTRLVQVSNSDAIFQLLFYASQSSNEQELSLRLYESIQDHRSYQEMVDSMGTKEVNDLDMDHLAFDGGESALSDLGLSTSDRKCLLAAYEAEKKRVDNQSKMDKERETKTEEKLDWIENVYKPRCLALAKGYYDSFKESPEDDDFTANVTRAELAGSFDKVFGLLKKGQLPDGFEGRSEWIELQIRYVKLVEPLDIANYHRHLKNEDTGPYMGKGRPNRYKHAQRLYEHKLLKAGRPAEEIKTSSLGSCFWAEVEELRGKEYDKVKVSKLEELLQGWIIDKEVDDEHIFLEGSTFRKWWHSLPELHKLCSLLRGRMG", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 284, "right_index": 285, "representative": { "id": "Bra033775", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 36, "end": 202, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra033775", "score": 0.010835 } }, { "node_id": 6345272, "distance_to_parent": 0.052473, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 277, "right_index": 282, "children": [ { "node_id": 633782, "distance_to_parent": 0.02218, "protein_stable_id": "Bo1g073600.1", "gene_stable_id": "Bo1g073600", "cigar": "972D7M13D8M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15MD12M35D6M12D2MD19M16D13MD11MD11MD18M13DMD17MDM13D34M293D26M72D6M2DMDM18D7MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D23M17D20M2D21MD5M28D10M34D", "sequence": "MVLEALAGISNALIATSWRASTTAYSTDHFHIEVEGDTVIFAFKQSFLVKDWFDPENASPFEETKMNREQFPCMRSIGNDVNATVNEAFLKNLKLLVSTSFPHSVKTVVDSMRSQRIVFTGHSSGGATAILATSGFFPEPLCLTFGAPLVGDYVFKHALGRENWSRFIVNFVTRFDIVPRIMLARKASTKQALPYALSQLGRRAGNQGNDQSTTGFFAMVMKDTATVAHQAVCKLIGNGEPFLKTLSSFLELSPYRPAGTFVFSTGTRLVSHLPLDGGESALSDLGLSTRARQCVRAAFEAEKKRVDSQSKIDAKQPKIVEKLVWIEDEYKPKCLTHKIGYYDSFKESNEEKDFRANVNRAELAGIYDEVLGLVKEGQLPDGFEGRIEWIELANRYRRLIEPLDISNYHRHLKNEDTGPYMIHGRPNRYKHAQRGYEHELLKACRSAEEIKRSDCGSCFWAEVEELRRKEYDEARVKKLEELLEGWIRDKEVDDEHIFLEDSSFRKWWQSLPEVHRRGSSLQVRMG", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 280, "right_index": 281, "representative": { "id": "Bo1g073600", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 36, "end": 187, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633703, "distance_to_parent": 0.010079, "protein_stable_id": "Bra033774.1-P", "gene_stable_id": "Bra033774", "gene_description": "AT3G48080 (E=1e-185) | lipase class 3 family protein / disease resistance protein-related ", "cigar": "972D7M13D8M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15MD12M35D6M12D2MD21M5D22MD11MD11MD18M13DMD17MDM13D34M293D26M4D27M2D2MD2M2D3MD11M7D16M2DMDM18D7MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM32D23M17D20M2D21MD5M28D10M34D", "sequence": "MVLEALAGVSNALIATSWRASTTAYSTDHFHIEVEGDTVFFAFKPSFLVKDWFDPENASPFGETKMNREQFPCMRSIGNDVNATVNEAFLKNLKLLASTSFPHSVKTVVDSMRSQRIVFTGHSSGGATAILATVWYLETYFTKQSGFFPEPLCLTFGAPLVGDSVFKHALGRENWSRFFVNFVTRFDIVPRIMLARKASTKQALPYALSQLGRKSGNQGNDQSITGFFATVMKDTATVAHQAVCKLIGNGEPFLKTLSSFLELSPYRPAGTFVFSTGTRLVSVSNSDAILQILLYSSQSSNEQELSLRPHQSIRDHHSYEEMVHSMAMKVVNQLDLQHLPLDGGESALSDLGLSTRARQCVRAAFEAEKKQVNNQSKIDAKQPTILEKLVWIEDEYKPKCLTHKIGYYDSFKESNEEKDFRANVKRAELAGIYDEVLGLVKEGQLPDGFEGRIEWIELANRYRRLIEPLDISNYHRHLKNEDTGPYMIHGRPNRYKHAQRGYEHELLKAGRSAEEIKRSDCGSCFWAEVEELRRKEYDEARVTKLEELLEGWIRDKEVDDEHIFLEGSSFRKWWHSLPEVHRRGSSLQVRMG", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 278, "right_index": 279, "representative": { "id": "Bra033774", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 36, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra033774", "score": 0.010079 } } ], "representative": { "id": "Bra033774", "score": 0.062552 } } ], "representative": { "id": "Bra033774", "score": 0.08252 } }, { "node_id": 6345275, "distance_to_parent": 0.027732, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 0.5, "node_taxon_id": 3701, "node_taxon": "Arabidopsis", "left_index": 265, "right_index": 274, "children": [ { "node_id": 633807, "distance_to_parent": 0.071699, "protein_stable_id": "AT3G48080.1", "gene_stable_id": "AT3G48080", "gene_display_label": "EDS1B", "gene_description": "Protein EDS1B [Source:UniProtKB/Swiss-Prot;Acc:Q9SU71]", "cigar": "970D9M15D6M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M35D8M10D2MD21M5D22MD11MD11MD18M13DMD19M13D34M293D26M3DMD26M2D2MD2M2D3MD11M4D19M2DMDM18D7MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM2D14MD3M5DMD29M15D21M2D21MD5M5DM18D13MDMD2MDM28D", "sequence": "MAFEALTGVNGDLVTISWMASKGANQTEHYLKEEVGGTVFFAFRASFSSEDLFATENTSPFGEIKMKRNQFPCMRSIGNDVDTTVNEAFLKSLEVLIGPRTSFHASVQSAVDRKQQVVFTGHSFGGATAILATVWYLETYFIRDAYAAPEPRCVTFGAPLVGDYIFKHALGRENWSRFFVNFVTRFDIVPRIMLARKTTIEQTLSYVLGKLDSTRAPIHESDQVITEFYTRVMRDTYTVASKAVCQLIGNGEAFLETLSSFYELSPYRPVGTFVFSTQKRLVVVNNSDAILQMLFYTCQSNDEQELSVIPFLSIRDHHGYEELVQSIGIKLLNHLDLHNPLLDGENSIGSALDDLGMSTRARQCIHAALEAEKQRVENQKKIETKRDQIVERLTWIVEVYKPKCQAHKNGYYDSFKDSNEENDFKANVKRVELAGIFDEVLGLVKKGQLPDGFEGSRGWINLATQYRRLIEPLDISNYHGQLKNEDTGPYMLHGRPSRYKYAQRGYEHDILKPTGMIAKDVFWSKVNGLNLGLQQDIQEILKNSGSECGSCFWAEVEELKGKPYEEVQVRFKTLEGLLEGWIKDGEVDEKEIFLEGSTFRKWWNTLPDSHKIHAPLYPRERMMDETRAT", "taxon_id": 3702, "system_name": "arabidopsis_thaliana", "assembly": "TAIR10", "left_index": 272, "right_index": 273, "representative": { "id": "AT3G48080", "score": -175 }, "domains": [ { "interpro": "IPR029058", "start": 35, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345276, "distance_to_parent": 0.046925, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3701, "node_taxon": "Arabidopsis", "left_index": 266, "right_index": 271, "children": [ { "node_id": 633798, "distance_to_parent": 0.034756, "protein_stable_id": "AT3G48090.1", "gene_stable_id": "AT3G48090", "gene_display_label": "EDS1", "gene_description": "Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]", "cigar": "970D9M15D6M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M35D8M10D2MD31M5D12MD11MD11MD18M13DMD19M13D34M293D26M3DMD26M2D2MD2M2D3MD11M8D14M24D7MD7M44D14M3D2M2DM3DM11D2M3D2MD4M2D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM2D14MD3M5D31M15D21M2D21MD5M26D13MD2MDM28D", "sequence": "MAFEALTGINGDLITRSWSASKQAYLTERYHKEEAGAVVIFAFQPSFSEKDFFDPDNKSSFGEIKLNRVQFPCMRKIGKGDVATVNEAFLKNLEAIIDPRTSFQASVEMAVRSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVSRFDIVPRIMLARKASVEETLPHVLAQLDPRKSSVQESEQRITEFYTRVMRDTSTVANQAVCELTGSAEAFLETLSSFLELSPYRPAGTFVFSTEKRLVAVNNSDAILQMLFYTSQASDEQEWSLIPFRSIRDHHSYEELVQSMGKKLFNHLDGENSIESTLNDLGVSTRGRQYVQAALEEEKKRVENQKKIIQVIEQERFLKKLAWIEDEYKPKCQAHKNGYYDSFKVSNEENDFKANVKRAELAGVFDEVLGLMKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHYILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKGKPYEEVEVRVKTLEGMLGEWITDGEVDDKEIFLEGSTFRKWWITLPKNHKSHSPLRDYMMDEITDT", "taxon_id": 3702, "system_name": "arabidopsis_thaliana", "assembly": "TAIR10", "left_index": 269, "right_index": 270, "representative": { "id": "AT3G48090", "score": -175 }, "domains": [ { "interpro": "IPR029058", "start": 40, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633831, "distance_to_parent": 0.027543, "protein_stable_id": "fgenesh2_kg.5__1161__AT3G48090.1", "gene_stable_id": "fgenesh2_kg.5__1161__AT3G48090.1", "gene_display_label": "EDS1", "gene_description": "Enhanced disease susceptibility 1 [Source:UniProtKB/TrEMBL;Acc:D7LRI7]", "cigar": "970D9M15D6M82D3M41D7M128D19M14DM12D8M16D4MD11M7D13M12D15M3D10M35D8M10D2MD21M5D22MD11MD11MD18M13DMD19M13D34M293D26M3DMD26M2D2MD2M2D3MD11M8D14M24D7MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D17M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD9MDM2D14MD3M5DMD29M15D21M2D21MD5M26D13MD2MDM28D", "sequence": "MAFEALTGINGDLITASWMASKKAYQTERYHKEEAGTVVIFAFRPSFSAEDLFAPANISSFGEIKMKRVQFPCMRKIGKGDEATVNEAFLRNLEVIIDPKTSFYASVEMAVSSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYPEPRCVTFGAPLVGDSIFSHALGRENWSRFFVNFVTRFDIVPRIMLARKTSIEQTLPHVLGQLDPTNPSIQESDQRITEFYTTVMRDTSTVANRAVCELTGTAEAFLETLSSFLELSPYRPAGTFVFSTEKRLVAVNNSDAILQMLFYTSQASDEQERSLIPVRSIRDHHSYEELVQSMGMKLFNHLDGENSIGSTLNDLGVSTRGRQYVLAALEEEKKRVENQKKIENKWPQIVKELLWIENEYKPKCQAHKIGYYDSFKVSNEENDFKANVKRAQLAGIFDEVLGLSKKGQLPDEFEGGRDWIELATRYRRLIEPLDIANYHRHLKNEDTGPYMRRGRPNRYIYAQRGYEHIILKPQGRIAEDVFWNKVNGLNLGLQQEIQEILRNSGSECGSCFWAEVEELKGKPYEEVEIRVKTLEGFLQGWIRDGEVDDKEIFLEGSTFRKWWSTLPENHKLHSPLREHMMDEIRAT", "taxon_id": 81972, "system_name": "arabidopsis_lyrata", "assembly": "v.1.0", "left_index": 267, "right_index": 268, "representative": { "id": "fgenesh2_kg.5__1161__AT3G48090.1", "score": -150 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "AT3G48090", "score": -174.965244 } } ], "representative": { "id": "AT3G48080", "score": -174.928301 } } ], "representative": { "id": "AT3G48080", "score": -174.900569 } }, { "node_id": 6345278, "distance_to_parent": 0.045635, "node_type": "speciation", "bootstrap": 8, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 198, "right_index": 263, "children": [ { "node_id": 6345301, "distance_to_parent": 0.142696, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 249, "right_index": 262, "children": [ { "node_id": 633751, "distance_to_parent": 0.053996, "protein_stable_id": "VIT_17s0000g07560.t01", "gene_stable_id": "VIT_17s0000g07560", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6GSX7]", "cigar": "970D9M13D7M3DM79D3M41D7M126D21M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M9D18MD11MD11MD18M17D18M13D33M293D26M3D27MDM2DMD2M2D3MD11M5D18M2DMDM3D5M2DM7D7MD7M44D14M3D2M2DM3DM11D2M3D2MDM4D6M2D10MD6M3D13M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD20M27D13M32D", "sequence": "MGETLGNRIRLSEEIVNRAASQAMRAHNSAGRPFLLDKTRGFAIFAFAGSWLPDDWFTHPPFGETKMDASTFPSLRSVGNDEVAVVNASFLRRFKAILDQLPLEREVQKVIADRRQVVFTGHSWGGAMAILATLYFLEKAGPNQNPPRCITFGSPLVGDRIFGHAVRREKWSDHFIHFVMRFDVIPRIMLGPASTEHQQILNFFNPRSQFYREPLDPPLGFYLNVMRSASSVAIHDACILMGCTNPLLETLRNFTELSPYRPFGTYIFCTGNGKLVVLKNPDAVLQILFYCAQLSQEEAAEIAQRSLHEHLAYENELQESLGMQNVVYLDSLEDLPLSSNGGPATVNIALNDLGLSPQARLCLRAAGGFENRRLRNQVKIDDNKQKINDELRKLKDYQEKAETRKLGYYDAFKHQEEKADFDANVSRLVLAGIWDEIIEMLRRYELPDEFENRKELIELATIYRRIVEPLDIANYYRHLKNEDTGTYVTRGRPKRYRYTQRWLEHAENKPSGSRSESCFWAELEELCIQTSGNGSLQDTKQKIQQLQKNVIEWIHEGSLGKDVLLEDSTFVKWWKTLPFEYKSDPESSRIANLIHG", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 260, "right_index": 261, "representative": { "id": "VIT_17s0000g07560", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 36, "end": 211, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345302, "distance_to_parent": 0.056721, "node_type": "duplication", "bootstrap": 96, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 250, "right_index": 259, "children": [ { "node_id": 633805, "distance_to_parent": 0.051447, "protein_stable_id": "VIT_17s0000g07400.t01", "gene_stable_id": "VIT_17s0000g07400", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6GSY6]", "cigar": "819D184M79D30M13D8M83D35M2D27M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M9D18MD11MD11MD18M17D18M13D33M293D26M3D27MDM2DMD2M2D3MD11M5D18M2DMDM3D5M2DM7D7MD7M44D14M3D2M2DM3DM11D2M3D2MDM3D7M2D10MD6M2D2MD11M3D3M2D2M5D5M3D8M280D", "sequence": "MGTCNFPSLKSLGDDGVALVNGSFLQRFNAIHSSLAKKSTQAMLCLQATGELEKLKSRNQDKIINDYKQKIEGELRKLSKYKEKAETCGLGYYDSFKLQEKEDGFQANVSRLVLAGYWDEMMEMLKAYKLPDEFEKSHDCIRLGTDYRRTVEPLDIANFYRHAKDEETGFYVKKGTRPKRYRYIQNWLEHAEKKPSGSRSESCFWAEVEDLRIKTRSNGSSPEIKQKRENLHRENMGETLDRIGLSGEVINAAASLAMKAHDSTREPFLLKKPRGLSVAVVAFAGSWLPDDWCAETPFGETTIDAGTFPSLKSLGDDGVALVNGSFLRRFKAILGQSSLAEKVKKVIGEKKRVVFTGYSSGAPVAILATLCLLEKPEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFVHFVMRYDVIPRIMLAPSSTEHKQILDFFNPRSEFFRKPIDSPLGFYSSVMRNASLVANYDACNLMGCRIPALETLRNFIELSPYRPFGTYIFCTGNGKLVVVRNSNAVLQMLFYCAQWTQEEAAGVAQRSLSEHLAYKDEIQESLGMQNVVYLDRLEEIPVSSDGSPATVNTALNDLGLSPQGRLCLQAAGELEKRKSRNQDKIINDYKQKIEGELRELRKYKEKAETCGLGYYDSFKLNKYEEDFRANVSRLVLAGF", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 257, "right_index": 258, "representative": { "id": "VIT_17s0000g07400", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 274, "end": 442, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345304, "distance_to_parent": 0.015153, "node_type": "duplication", "bootstrap": 96, "duplication_confidence_score": 1, "node_taxon_id": 29760, "node_taxon": "Vitis vinifera", "left_index": 251, "right_index": 256, "children": [ { "node_id": 633773, "distance_to_parent": 0.023963, "protein_stable_id": "VIT_17s0000g07420.t01", "gene_stable_id": "VIT_17s0000g07420", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D7SI01]", "cigar": "936D43M13D7M3DM79D3M41D7M126D21M29D6M16D4MD11M7D13M12D15M5DMD6M35D8M10D2MD21M9D18MD11MD11MD18M17D18M13D33M293D26M3D27MDM2DMD2M2D3MD11M5D18M2DMDM4D4M2D2M6D7MD7M44D14M3D2M2DM3DM11D2M3D2MDM2DMD6M2D10MD6M3D13M3D3M2D2M5D5M3D59MDM2D20MD3M40D24M10D26M2D6MD20M27D15MDMD4M23D", "sequence": "MANKPLTLLPTGYKSSCSVTASNHTQREKICTENMGETLGDRIGLSDEVINAAASLAMKAHDCTGKPFLRKKGLPVTVFAFAGSWLPDDWCAQPPFGETKMDTSNFPSLKSLGDDGVALVNGSFLRRFNAIQSSLAKKVKKVIGEKKQVVFTGYSSGAPVAILATLYLLEKSEPNQSPPRCVTFGSPLVGDRIFCHAVRREKWSDHFIHFVMRYDVIPRIMLGPSSTEHKQILDLFNPGSESFRKHTDSSLGLYSSVMRNASMVANYDACNFMGCKIPALETLRNFIELSPYRPFGTYIFFSGSGKPVVVRNPNAVLQMLFYYAQWSQEEDAEAAKKGLNEHLAYQLKKLQSLGKQNVVYLDHLEELPVSSDGSPATVNTTLNDLGLSTQAMLCLQATGELEKRKSRNQDKIINDYKQKIEGELRKLSKYKEKAETCGLGYYDSFKLQEKEDDFQANVSRLVLAGYWDEMMEMLKAYELPDEFEKSHDFIRLGTDYRRTVEPLDIANFYRHAKDEETGFYVNKGTRPKRYRYIQNWLEHAEKKPSGSRSESCFWAEVEDLRIKTRSNGSSPEIKQKVQQLGQNLIKWIDDESLGKDVLLENSTFVKWWKPLPPEPLFTSKMIFFLSVCKILFPVLNM", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 254, "right_index": 255, "representative": { "id": "VIT_17s0000g07420", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 71, "end": 248, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633838, "distance_to_parent": 0.021587, "protein_stable_id": "VIT_17s0000g07370.t01", "gene_stable_id": "VIT_17s0000g07370", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D7SI06]", "cigar": "964D15M23DM79D3M41D7M124D23M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M9D18MD11MD11MD18M17D18M13D33M293D26M3D27MDM2DMD2M2D3MD11M6D17M2DMDM3D5M2DM7D7MD7M44D14M3D2M2DM3DM11D2M3D2M4D8M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D20MD3M40D24M10D26M2D6MD20M27D15M30D", "sequence": "MGETLDRIGLSGAVINAAASLAMKAHDSTREPFLLKKPRGLSVAVVAFAGSWLPDDWCAETPFGETTIDAGTFPSLKSLGDDGVALVNGSFLRRFKAILGQSSLAEKVKKVIGEKKRVIFTGYSSGAPVAILATLYLLEKSEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFIHFVMRYDVIPRIMLGPSSTEHKQILDFFNPGSESFRKHTDSSLGLYSSVMRNASMVANYDACNFMGCRIPALETLRNFIELSPYRPFGTYIFCSGSGKLVVVRNPNAVLQILFYCAQWSQEEDAEAAKKGLNEHLDYQKELQSLGKQNVVYLDHLEELPVSSDGSPATVNTTLNDLGLSTQAMLCLQATGELEKRKSRNQDKIINDYKQKIEGELRKLSEYKEKAETCGQSYYDSFKLQEKPDAFHANVSRLVLAGYWDEMMEMLKAYELPDEFEKRQDLIQLGTNYLRMVEPLDIANFYRHAKDEETGFYVKKGTRPKRYRYIQSWLEYAEKKPSGSHSESCFWAEVEDLRIKTRSNGSSPEIKQKVQQLGQNLIKWIDDESLGKDVLLENSTFVKWWKSLPPEYKSEPESSRIMKLIHEKD", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 252, "right_index": 253, "representative": { "id": "VIT_17s0000g07370", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 217, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "VIT_17s0000g07370", "score": 0.021587 } } ], "representative": { "id": "VIT_17s0000g07370", "score": 0.03673999999999999 } } ], "representative": { "id": "VIT_17s0000g07560", "score": 0.053996 } }, { "node_id": 6345280, "distance_to_parent": 0.013386, "node_type": "speciation", "bootstrap": 5, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 199, "right_index": 248, "children": [ { "node_id": 633710, "distance_to_parent": 0.20955, "protein_stable_id": "EOY20573", "gene_stable_id": "TCM_011959", "gene_description": "Disease resistance protein, putative", "cigar": "968D7M20D4M3DM79D3M41D7M124D23M26D9M16DM4D11M7DM2D37M3D3MD6M35D8M10D2MD21M6D21MD11MD11MD18M13DMD20M9DM3D33M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM7DM2D15MD7M44D14M3D2M2DM3DM11D2M3D2MDM3DMD5M2D10MD6M2D2MD11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M9D27M2D6MD14MD3M29D13M32D", "sequence": "MDSLPLGEEVIQKACSIAMEAHNYPEAPCRVENSPSSSDVFFTFPGSWSVADWFTRLPFGETKVDPSKLLSPKGKDKVATSLRSIGRDELATVNEGFWKRLEMILANPSLQSEVEKAIADKKQIVFTGHSSAGAVAILATVWFLENYIKPEITRMSPLCVTFGSPLVADFIFNHALRRENWSHCFIHFVMRYDIVPRILLAPLSSMERELEQILYLLNPKPLFPSQGSTRVASQFYQTVMRNASALTSHAACQLMGNANPILETVASFIELSPYRPCGTFVFCTGNGKLVVVRNADAVLQLLFYSTQLCSENELEEVAERSLNSHFDYQSELRERLKMQNVVHLDHLDGLPLSSNGAAAENIATSMALNELGLSTRARLCLRAAGEQEKQKLSNQQRMDRKKADIEAGLAMLEDYKSKCAVCQVGYYDAFRSSKDEDDFKANVKRLELTGIWDEIVEMLNRYELPEGFESRKEWVELSTRYRRIVEPLDVANYYRHAKNEDTGPYMDKGRPRRYKYTQRWREHALRMPVGSSAESSFWAEVEELQLHRRTRPGAFEEIRETILNLERKLKEWIDGEHISRDVFLEGSSFTKLWKSLPQQHKSVSCLQGQINS", "taxon_id": 3641, "system_name": "theobroma_cacao", "assembly": "GCA_000403535.1", "left_index": 246, "right_index": 247, "representative": { "id": "TCM_011959", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 29, "end": 204, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345281, "distance_to_parent": 0.004379, "node_type": "speciation", "bootstrap": 5, "node_taxon_id": 91835, "node_taxon": "fabids", "left_index": 200, "right_index": 245, "children": [ { "node_id": 6345282, "distance_to_parent": 0.109087, "node_type": "duplication", "bootstrap": 77, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 235, "right_index": 244, "children": [ { "node_id": 633809, "distance_to_parent": 0.455029, "protein_stable_id": "POPTR_0012s07630.1", "gene_stable_id": "POPTR_0012s07630", "gene_display_label": "POPTRDRAFT_570033", "gene_description": "Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9I343]", "cigar": "1126D7M128D19M32D3M16D4M19D13M12D15M74D16M6D21MD23MD14M51DM3D30M293D26M5D26M2D2MD2M2D3MD11M17D6M2DMDM77D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D10MD6M2DM2D11M23D9M166D12M9D7M85D", "sequence": "MSMKAHKSPDKHYLSKKINESSFIFSFPGSWTFQLFPSLKYTGLDETATCDEAFLKRSKAATLQEGAIAILATIWFLELYVRQGSKDTSPLCFTFGSSLAGDRTMSHALRPIEQQLQQVLDFFNPKSKFYKQEHADQVPGFFVIVMENASSVARYAACNTMGSPNLLLETLSSFIKLSPYTPLGTYVFCNRKLVVESNPDAILQILFNSSQLSTVEEKVTVARGSLRDHLNYKSKLYLVLIMSDRARLCISAAKELEKQKLRNQAVIDEKKRDIEEKIQKLEAYKSNCELSKSCYDEEELYYKCFHLLLWFVPYIFSYGDLKMLKSDCF", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 242, "right_index": 243, "representative": { "id": "POPTR_0012s07630", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 66, "end": 147, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345284, "distance_to_parent": 0.054075, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 236, "right_index": 241, "children": [ { "node_id": 633825, "distance_to_parent": 0.071392, "protein_stable_id": "POPTR_0015s08100.1", "gene_stable_id": "POPTR_0015s08100", "gene_display_label": "POPTRDRAFT_807962", "gene_description": "Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:B9IEK5]", "cigar": "969D10M13D8M82D3M41D7M120DM3D23M14DM12D8M16D4M4D8M7D13M12D15M3D3MD6M35D8M10D2MD21M6D21MD11MD11MD18M13DMD19M13DM3D30M293D26M3D28M2D2MD2M2D3MD11M7D16M2DMDM3D5M2D15MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D10MD6M2DM2D11M3D3M2D2M5D5M3D59MDM2D6MD13M5D2M37D24M14D22M2D6MD14M39D4M35D", "sequence": "MGIVKLGENMEIKEEVIMKACSMAMKAHKSPEKQYLSEGIHSSSSEVVFSFAGSLSVNDWFAGSAFGEMKVDLQFFPSLKYVGLDQTGRVNEAFFKRFEAVLANPRFKVEVEKAVADRRQVVFTGHSSGGAIAILATAWFLEVYNRQSSNCMAPLCLTFGSPLVGDYIINIAIRREKWSRYFVNFVMRYDIVPRISLCPLSSIKQQLQRVLDYFNQNAPQPPNDAPAFYETVVKNASSVANYAACKIMGSTNPLLETVSSFIEPSPYRPFGTYVFCTGTGKLVVISNPDAVLQVLFYSSQLSTEEEKVTVAQTSLRDHLNYENYLQEHLKTPAVTSLFHHRQEALAVSWNVASVEREKVDMALNDLGLSERARLSLRAAEALEKQKLRNQDTIDGKKKDIEKCLDKLQEYQSKCAHKVGYYDAFKCSEEEEDFHANVARLELAGTWDVIIEMLKRYELPDEFEGQKEWIGLGTRYRRIVEPLDIANYYRHLKNEDTGPYMGKGRPRRYKCTQKWREHAEQLPNEIPESCFWAEVEELCIKAGCQGTIESILHLKTKVDKWIQNEELGGDVLLENSTFTKLQKQHFLTN", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 239, "right_index": 240, "representative": { "id": "POPTR_0015s08100", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 42, "end": 219, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633781, "distance_to_parent": 0.049033, "protein_stable_id": "POPTR_0012s07640.1", "gene_stable_id": "POPTR_0012s07640", "gene_display_label": "POPTRDRAFT_823348", "gene_description": "Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:A9PFG4]", "cigar": "969D10M13D8M82D3M41D7M120DM3D23M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M6D21MD11MD11MD18M13DMD19M13DM3D30M293D26M3D32MD2M2D3MD11M3D20M2DMDM7DM2D15MD7M44D14M3D2M2DM3DM11D2M3D2M2D2M3D5M2D10MD6M2DM2D11M3D3M2D2M5D5M3D59MDM2D6MD13M5D2M37D24M14D22M2D6MD14M34DMD10MDMD11M18D", "sequence": "MGTVKLGENMEIKEVVIQKACSMAMNAHKSPEKQYLSKKIRTSSSEVVFSFPGSWSVNDWFAGTSFGETKMDPQLFPSLKYVGLDVTATVNEVFLNRFKAVLANPQFQIEVEKAATDRRQIVFTGHSSGGAIAILATIWFLEEQIRKSSNWIAPLCLTFGSPLVGDRIINLALRRENWSRYFVNFVMRCDIVPQISLSPLSSINQKLQQVLDYFNQKAQQPPNEAPAFYVTVVKNASSVANYAACKIMGSTNPLLETISSFIELSPYRPLGTYVFCTGNGKLVVSSNPDAVLQVLYYASQLSTGEAREKVEVAQTSLRDHLNYGNDLQEYLKMSIVTCLYQHHPEALPLSSNVGNVERGRVDVALNDLGLSERARLCIHAAEALEKQKLRNQASIEEKQKDIEKCLDKLEAYKKKGALKVGYYDAFKSSEQKEDFHANVERLELAGIWDEIIEMLKRNELPDEFEGRKTWIDLGTRYRRIVEPLDIANYYRHLKNEDTGPYMGKGRPRRYKCTQRWREHAERLPHEVPGSCFWAEVEELCIKTSCQGIKESISHLNTKVKKWIKDGELGVDVLLENSTFNKLLKQHFLTNFSQDLDLRKELHVQGFADA", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 237, "right_index": 238, "representative": { "id": "POPTR_0012s07640", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 42, "end": 201, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "POPTR_0012s07640", "score": -99.950967 } } ], "representative": { "id": "POPTR_0012s07640", "score": -99.89689200000001 } }, { "node_id": 6345285, "distance_to_parent": 0.028178, "node_type": "speciation", "bootstrap": 23, "node_taxon_id": 91835, "node_taxon": "fabids", "left_index": 201, "right_index": 234, "children": [ { "node_id": 6345286, "distance_to_parent": 0.149877, "node_type": "duplication", "bootstrap": 99, "duplication_confidence_score": 1, "node_taxon_id": 3760, "node_taxon": "Prunus persica", "left_index": 224, "right_index": 233, "children": [ { "node_id": 633792, "distance_to_parent": 0.187315, "protein_stable_id": "EMJ10355", "gene_stable_id": "PRUPE_ppa005959mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5WUA1]", "cigar": "969D10M13D7M3DM79D3M41D7M124D23M26D9M16D2M3D11M7D11M131D15MD11M11DMD14M53D32M293D26M3D29MD2MD2M2D3MD11M2D21M4DM19D6MD7M44D14M3D2M2DM3DM11D2M3D2MDM3DMD5M2D10MD6M2DM2D11M3D3M2D2M5D5M3D57M6D20MD4M39D22M139D", "sequence": "MYVQRLGEMLKISEENLKTSCSLSLKAQNFPDEQFLVEKSPASSHAFFSFPGSWSVDGWYSGDKAFGEKVINLELFPSMRSIGNYDKDDKPEDQEFATGFVNQAFLHRLEHVLKTSQLVNQVLGASPEALHFYANVIRNASSLTSHVAFQLMGNTNLLLDTVRHFTKLSPYKPFGTYVFCTGNGKLVVLKNPEAVLQTLSYSCLLSSETEHAAAIAHKCLNEHFGYEKEFLGDESSLDMQNVVDFDKLELLLGSDGYLDDLGLGVRARLSLCAAKKFEEKKQENEKSVASKVEAFKDVMKKLEDYRDFCKENGGYYQAFKIQGEKKDFDANVNRLVLAGIWDEIIEMLKRYALPDEFEGTYKWIELGTKFRDLVEPLDIANYYRHAKGRRYMDKGGRPKRYKYTQRWLEHHLKLQPGACGKSSCFWAEEEESLKQ", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 231, "right_index": 232, "representative": { "id": "PRUPE_ppa005959mg", "score": 0 }, "domains": [] }, { "node_id": 6345288, "distance_to_parent": 0.014683, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3760, "node_taxon": "Prunus persica", "left_index": 225, "right_index": 230, "children": [ { "node_id": 633810, "distance_to_parent": 0.087265, "protein_stable_id": "EMJ11798", "gene_stable_id": "PRUPE_ppa019013mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5WR61]", "cigar": "969D10M13D7M3DM79D3M41D7M124D23M14D2M8D8M20DM3D11M7D11MD47M29DM21D20M8D19MD11MD11MD18M13DMD20M9D37M293D26M3D29M2DMD2M2D3MD26M2D6M2DMDM19D6MD7M44D14M3D2M2DM3DM11D2M3D2MDM3D6M3D10MD6M2DM2D11M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D26M2D6MD14MD5M27D15MDM28D", "sequence": "MACGRLGEMLNLSEELIKKSCYLSLKAQNFPDELLLVEKPPASSHAFFCFPGSWSVDSWFSGEKAFGETVITPALFPCMKSIGNHNETAKPGDLEFAIAFVNQAFLQKFEHVLQTSQLVNQVQDAINERKSIIFTGHSTGGAIAALATIWFLQKYPKTNAATFFCVTFGSPLVGNHIISHALRRENWSQYFIHFVMRYDIVPRILLAPLSSIHQGLQKILPFFDLKSPYFRSQILGTSLEAWHLYTNVMRDASALTTHVASQLMGSTNLVLQTVKNFIKLSPYKPFGTYVFCTGNGKLVVLKNPEAVLQTLFYSCQLSGETEWAAIAHNCLNEHFSYEKEFLGGECSLDMQDVVALDKLEELCLGSDRYLDDLGLSAEARLCLRAAGESEKQKGENQKKVNGKREEMKKALENLEEYRALCEHNVGYFDAFKIQKDRRDFEANVSRIVLTGIWDEIIEMLKKYELPDEFEAIKEWIQLGTRFRRLVEPIDIANYYRHSKDEDTGPYMKKGRPKRYKYPQRWLEHEQKLPAGSCGESWFWAEVEELHKLTGDGTAIYRERERVLKLQREVGNWIREGLVGKDVLLKSSTFYSWWQPLPPPLKSEIISGLMDDQGSMQE", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 228, "right_index": 229, "representative": { "id": "PRUPE_ppa019013mg", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 37, "end": 225, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633734, "distance_to_parent": 0.081362, "protein_stable_id": "EMJ11893", "gene_stable_id": "PRUPE_ppa026180mg", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M5WRF8]", "cigar": "969D10M13D7M3DM79D3M41D7M123D24M26D9M16D2M3D11M7D14MD25M6D7M4D2M29DM21DM3D16M8D19MD11MD11MD18M13DMD20M9D37M293D26M3D23M8DMD2M2D3MD6M13D15M2DMDM19D6MD7M44D14M35DMD4M12DMD6M2DM2D11M3D3M2D2M5D5M18D44MDM2D20MD3M40D18M55D16M28D14MDMD4M23D", "sequence": "MACESLGGMLNISEELIKKSCCLSLKVQNFPDKLFHAEKSPASSSHAFFSFPGSWSVDGCYSGDKAFGEKEINLQLFPSMKSTGNYDEAKEPRAREFAIAFVNQAFLHKFEHILQSFQVENQLWHSTGGAMAALATIRFLEKFPNADSGTFFCATFGSPLVGNRIISHALRRENWSKDLINSVMRYDIVPRILLAPLSSIQQQFEKILPFFDPKWSNFKSEIPGTAPEALHLYTNVMRNASALTSHDASQLMGSTNLLLETVKHFIKLSPYKPFGTYVFCTGNGKLVVLKNPEAVLQTLFYSCQLSSETERAALAHKCLDMQNVVEVDKLEELCLGSDGYLDDLGLSVRARLCLRAAGESEKQKRLEDHRALCEHNRGYYDAFKISNDTRDSDPNVSRKYELPDEFEAIKKWIQLGTRYPHLVGPLDIANYYRHSRGELTRRYMKKGGRPKLYKYTQRWLEHYQKLQIGTCGESCFWAELEQSTFVKLWNKLPSQLQSEPIIGFMKEQTSIANVVVS", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 226, "right_index": 227, "representative": { "id": "PRUPE_ppa026180mg", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 104, "end": 198, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "PRUPE_ppa026180mg", "score": 0.081362 } } ], "representative": { "id": "PRUPE_ppa026180mg", "score": 0.096045 } }, { "node_id": 6345291, "distance_to_parent": 0.07941, "node_type": "duplication", "bootstrap": 60, "duplication_confidence_score": 1, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 202, "right_index": 223, "children": [ { "node_id": 6345293, "distance_to_parent": 0.077491, "node_type": "speciation", "bootstrap": 56, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 209, "right_index": 222, "children": [ { "node_id": 633725, "distance_to_parent": 0.121575, "protein_stable_id": "AES71566", "gene_stable_id": "MTR_3g079340", "gene_description": "enhanced disease susceptibility protein", "cigar": "969D10M13D7M3DM79D3M41D7M120D27M29D6M16D4MD11M7D13M12D15M4D9M35D8M10D2MD21M3D24MD11MD11MD18M13DMD20M10D36M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM3D5M2D2M6D7MD7M44D14M3D2M2DM3DM11D2M3D2MDM3D7M2D10MD6M2D14M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M10D27M2D5MD14MD2M2DM27D15M30D", "sequence": "MGGGLVGDNIGLNEEVIKKTCSLSFKAHNSENEPYISELFRISSDLTEYLVLSFPGSWVETDWFVRKSFGETKIDLAKFPLLKSVGNDETALVNQAFFNRFERLLKLSSFVAEVKKAIAEGKQVVFTGHSSGAVLAILATFWALEEYLYPTKIQIQHKSPMCVTFGSPLVGNHIFSHASNREKWSHHFIHFVMQYDIVPRIFLAPFSSIEKLISPVLQLLTPNNNSLTQDPIRDSVTCEFYSTVMRNAATVTSHVACNLMGSTNLLLETMTNFVELSPYRPFGTYIFCNGNGQMIVVKNSDAVLQLMFHIAQLRDLAQLSEVANKSILQHLAYEAELEESLGMQNVVYLNKLDDLPLSSGEGHDTDIAAALDSLGLSARARLCLRAAGELEKQKERNEEKIKKEFQDKAVPSMRDLEEYKSTCEINNGKGYYDAFKVQKEPKDFQANVKRLVLAGVWDEIIEMLKRYELPDEFEGKKEWIEHGTRFRRLVEPLDIANYHRHLKNEDTGPYMNKARPKRYRYTQRWLEHANRSPKAEITESTFWAEVEELCSWTSNNKPFEDIKERVLKLEQDIKMWTDKEVLTKDVLSKDPTFIKLWETLPQEHKATSCISTLFTVKE", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 220, "right_index": 221, "representative": { "id": "MTR_3g079340", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 45, "end": 238, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345294, "distance_to_parent": 0.031916, "node_type": "duplication", "bootstrap": 57, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 210, "right_index": 219, "children": [ { "node_id": 633823, "distance_to_parent": 0.141489, "protein_stable_id": "GLYMA06G19900.1", "gene_stable_id": "GLYMA06G19900", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1KCL7]", "cigar": "969D10M13D7M3DM79D3M41D7M124D23M24D11M16D2M3D11M7D13M12D15M4D9M35D8M10D2MD21M4D23MD11MD11MD18M13DMD20M10D36M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM4D4M2D2M6D7MD7M44D14M3D2M2DM3DM11D2M3D2M7D17MD6M3D13M3D3M2D2M5D5M3D59MD9MD13MD3M40D24M6DM2D28M2D5MD17M2DM28D12M32D", "sequence": "MAVGSLGDNIGLKEEFITNVCGLAFQANMSPENLYHFHEIEIFSEIYHVFSFSGSWNPHEWLVNNKPFGETKIDHALFPSLRSIGNDEAALVNEGFAKRFDLILKTSSIKSEVNKAMVDGKQVVFTGHSSGAAIAILATFWALEEYLNPTKPQNLKHPFCVTFGSPLIGNHIFSHSSRRENWSHYFIHFVLRYDIVPRILLAPFSSVGQTFSSILQILDPNFETSTQDPTRNCVISQFYSTVMTNAATVTSHAAGILMGSTNMLLETVTNFVDLSPYRPFGTYVFCNGNGQLIVVKNSDAVLQLLFHTAQLSNFAELEEVANNSILQHLNYVAELQESLGMQNVVYLEQLEQLPLSADGSNSDVATALDGLGLSPRARLCLRAAANLATRKLDNEDKIKQKKVFIEQKMKDLKKYREMWEHQNVGFYDGFREHKKKEDFKANVTRLELASVWDEIMEKLRSYQLPDEFEGNKEWVDLGSRFRQLMEPLDIANYYRHARHYEDGSSSYMLRGRPKRYRYTQKWLEHAERRPQEPSSTSCFWAEVEDLRYKTSYSNSSSFEDVKERVEQLEAQLQAWSEKGELANDVFLEGSTLVKWWKTLPLQHKQQSCIRNLINE", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 217, "right_index": 218, "representative": { "id": "GLYMA06G19900", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 48, "end": 205, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345296, "distance_to_parent": 0.058868, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 211, "right_index": 216, "children": [ { "node_id": 633829, "distance_to_parent": 0.041703, "protein_stable_id": "GLYMA04G34800.1", "gene_stable_id": "GLYMA04G34800", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1JX17]", "cigar": "969D10M13D7M3DM79D3M41D7M120D27M29D6M16D4MD11M7D13M12D15M5D8M35D8M10D2MD21M4D23MD11MD11MD18M13DMD20M10D36M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM3D5M2D2M4D9MD7M44D14M3D2M2DM3DM11D2M3D2MDM3D7M2D10MD6M2D14M3D3M2D2M5D5M3D59MDM2D6MD17M40D24M9D28MD6MD17M2DM29D5M38D", "sequence": "MAGGLLGDNLGLKEDVIKRVCGLASKAHNHKSTDKLYFYDKVRTSSGTYHVFSFSGSWDPAEWFFSKPFGGSKIDPTQFPSLRSIGNDEPALVNEGFAKRFDRVLKTSFKAEVNKAIGDGKQVVFTGHSSGAAIAILATFWALEEYLNPTKIQKPTPPFCVTFGSPLIGNHIFSHASRRENWSRYFIHFVLRYDIVPRILLSRLASIKQTFGSVLQFLNPNSKTSTQDPTRASLISEFYKTVMTNAASVTSHAACILMGSTSLLLGTVANFVELSPYRPFGTFIFCNGNGQLIVVKNSDAVLQLLFHTAQMSDLAELPEVANVSILQHQAYEAELDDSLGMQNVVYLEQLEQLPLSADGSNSDVATISAALDGLGLSTRARLCLRAAGELEKQKLKNEEKIKKEIQEKAVPSMTKLQNYKTTCEMHKGKGYYDAFKVQNEENDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGNSKWIEHGTEFRRLVEPLDIANYHRHLKNEDTGPYMIRARPKRYRYTQRWLEHAKRVPKPAPITESTFWAEVEELYSWINSKRHLDDEVKQRVVQLQKDLKKWTDDEKVLTKDTFLKDPNFIRWWDILPQELRVTSF", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 214, "right_index": 215, "representative": { "id": "GLYMA04G34800", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 32, "end": 222, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633820, "distance_to_parent": 0.029425, "protein_stable_id": "GLYMA06G19920.2", "gene_stable_id": "GLYMA06G19920", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1KCL8]", "cigar": "960D19M13D7M3DM79D3M41D7M120D27M29D6M16D4MD11M7D13M12D15M5D8M35D8M10D2MD21M4D23MD11MD11MD18M13DMD20M10D36M293D26M3D29M2DMD2M2D3MD11M5D18M2DMDM4D4M2D2M6D7MD7M44D14M3D2M2DM3DM11D2M3D2MDM3D7M2D10MD6M2D14M3D3M2D2M5D5M3D59MDM2D6MD13MD3M40D24M9D28MD6MD17M2DM29D5M38D", "sequence": "MKNYRIRDNMAGGSLGDNIGLKEDAIKRVCGLACKANNHKSTDKLYFYDKVQISSETYHVFSFPGSWDPAEWFVNKPFGVSKINSTQFPSLRSIGNDELAWVNEGFAKRFDRLLETNFEDVVKKAILDGKQVVFTGHSSGAAMATQTTFWVLEKYFNPTKIQKPKLPFCVTFGSPLIGNHIFSHASRRENWSRYFIHFVLRYDIVPRILLAPLASIEENFGSVLQFLNPKSKTSTQDPTRAILISEVYKTVMRNAASVTSHAACILMGSTNLLLETVANFVELSPYRPFGTYVFCNGNGQLIVVENSDAVLQLLFHTALLSDLAELEEVADKSISQHLNYVAELQESLGMQNVVYLEQLEQLPLSADGSNSDVATALDGLGLNTRARLCLRAAGELEKQKRKNEDKIMKEIQDKALTSMKELQNYKTTCEMHKGKGYYDAFKVQKESNDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGDKEWIKRGTEYRRLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRWLEHAKRMPPAPITESTFWAEVEELYSWINSKKPLDDHVEQRVKQLQKDLKNWTDDEKVLAKDTFLKDPNFIRWKDILPQELKDTSS", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 212, "right_index": 213, "representative": { "id": "GLYMA06G19920", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 45, "end": 214, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GLYMA06G19920", "score": 0.029425 } } ], "representative": { "id": "GLYMA06G19920", "score": 0.088293 } } ], "representative": { "id": "MTR_3g079340", "score": -99.878425 } }, { "node_id": 6345299, "distance_to_parent": 0.053475, "node_type": "speciation", "bootstrap": 61, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 203, "right_index": 208, "children": [ { "node_id": 633833, "distance_to_parent": 0.170206, "protein_stable_id": "GLYMA06G19890.1", "gene_stable_id": "GLYMA06G19890", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:I1KCL6]", "cigar": "969D10M23DM79D3M41D7M122D25M26D9M16DM4D11M7D13M12D15M3D10M35D8M10D2MD21M5D22MD11MD11MD18M13DMD22M7D37M293D58M2DMD2M2D3MD11M7D16M2DMDM4D4M2D15MD7M44D14M3D2M2DM3DM11D2M3D2M7D17MD6M3D13M2D4M2D2M5D5M3D59MD9MD13MD3M40D24M6D31M2D5MD14MD3MDM28D12M32D", "sequence": "MTQVMRGEVIEKAYAGSWKAHKSPDKPYLIEKINRNDPQEVIFCFPGSGAVRDWYSQKNFGETKIDLGLFPSLRSIGIDEQALVNEAFQKKFQEILSAKPSLADEVEKAMSKKKQIVFAGHSSGGAVAILATLWALENYQPPKSHGGIPPLCVTFGSPLVGNHIFSHATRRENWSHYFFHYVMRYDIVPRILLAPLSSLDPKFEPISQSFNPKSKSFMSDSVGRASAETTSEFYFAIISNAATVTSHAASKLMGTTDTTLETWSNFITLSPYRPFGTYYFCTGNGKSGKKIVITNSNAVLQVLFFSAQLSTEAEAAQVPYRSLRDHTIYGTELQQMGPQNVVHLDQHQLQNLPLSEDGAGGSNATINTALNDLGLIPRARLCLRAAAEWEARRTDNENKIKEKKDFVAKKLDVLREYRKMYKDKRVGFYDGFREHKQGEDDFKANVTRLELAGVWDEMMEKVRSYELPDEFEGNKDYIDLGTELRKLMEPLDIANYYRHGRNYEDSSSSYMIKGRPKRYRYPQRWLEHAERKSHESLSASCFWAEVEELHYKTSRSSNIVSLDQQFKERIEKLEIQIKAWSDRKELDEDVFLEGSTLVKWWKALPQQHKQHSCIKTLIRE", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 206, "right_index": 207, "representative": { "id": "GLYMA06G19890", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 35, "end": 197, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633750, "distance_to_parent": 0.162474, "protein_stable_id": "KEH35096", "gene_stable_id": "MTR_3g078633", "gene_description": "enhanced disease susceptibility protein", "cigar": "965D14M16D4M3DM79D3M41D7M122D25M29D6M16D4MD11M7D13M12D15M3D3MD6M35D8M10D2MD21M5D22MD11MD11MD18M13DMD20MDM7D37M293D58M2DMD2M2D3MD11M5D18M2DMDM6D2M2D15MD7M44D14M3D2M2DM3DM11D2M3D2M5D7M2D10MD6M3D13M3D3M2D2M5D5M3D59MDM2D20MD3M40D24M12D25M2D5MD14MD3MDM28D12M32D", "sequence": "MASSRGGSKIKELSAERIDKSFAASLKAHKTPEKLYLIEKNNKSNPPEVIISFPASGVFNDWYSKTTFGETEIDLKLFRSLKSIGNNEAAKVNQFFLQRFKDILAKSTLEEEVERAMKKKKQIVFAGHSSGGPVAILAALWALVNFPTTKFPDRIPPICITFGSPLVGNHIFSHATRRENWTDHFFHFVMRYDIVPRILLAPLSSFDQKFETVAQLLDPKSKSFMNESSLGRIASTSDFYFEVMSNATTVTRHAACRLMGTTEATLETIANFVPLSPYRPFGTYIFCTTSGNEGKQIVMKNPDAILQVMYFCAQISSEEETEEVPFKSLRQHLTYLAELVKNFGKQNVVYLDQLENLPLSEHTTSGGDIATINIALNDLGLSTRARLCIQAAAALEERKTNNEKSMLQKIAAVEDRMKALDSYRETRGHQKKGYYDAFKDQLDPEDFQANVQRLELAGVWDEIIEKLLNYELPEELEGNEDWKNIGTKFRRLVEPLDIANYYRHSRNRDGRVYMAKGGRPKRYRYTQRWLEHFEKRDEGGYSESCFWAEVEDLCHDPDKPFDDVKEKVEALEGFISKWHEKGEVGKDVFLGDSTFVKWWKTLPTHHKEQSCIRSLVEV", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 204, "right_index": 205, "representative": { "id": "MTR_3g078633", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 44, "end": 204, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "MTR_3g078633", "score": -99.837526 } } ], "representative": { "id": "MTR_3g079340", "score": -99.800934 } } ], "representative": { "id": "MTR_3g079340", "score": -99.721524 } } ], "representative": { "id": "POPTR_0012s07640", "score": -99.787805 } } ], "representative": { "id": "POPTR_0012s07640", "score": -99.783426 } } ], "representative": { "id": "POPTR_0012s07640", "score": -99.77004000000001 } } ], "representative": { "id": "AT3G48080", "score": -174.595126 } } ], "representative": { "id": "AT3G48080", "score": -174.571418 } } ], "representative": { "id": "AT3G48080", "score": -174.48836 } } ], "representative": { "id": "AT3G48080", "score": -174.460588 } }, { "node_id": 6345305, "distance_to_parent": 0.240468, "node_type": "speciation", "bootstrap": 42, "node_taxon_id": 1437183, "node_taxon": "Mesangiospermae", "left_index": 4, "right_index": 193, "children": [ { "node_id": 6345307, "distance_to_parent": 0.161744, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4734, "node_taxon": "commelinids", "left_index": 95, "right_index": 192, "children": [ { "node_id": 6345309, "distance_to_parent": 0.157799, "node_type": "speciation", "bootstrap": 30, "node_taxon_id": 4479, "node_taxon": "Poaceae", "left_index": 102, "right_index": 191, "children": [ { "node_id": 6345310, "distance_to_parent": 0.021961, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 147369, "node_taxon": "Panicoideae", "left_index": 177, "right_index": 190, "children": [ { "node_id": 633754, "distance_to_parent": 0.052153, "protein_stable_id": "Si026081m", "gene_stable_id": "Si026081m.g", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "960D19M10D10M82D4M41D7M127D20M22D13M16D4MD15M3D19M6D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D58M304D24M3D2MD23M5DM2DM2D3MD11M2D19M2D5M7DM2D2M6D7MD8M11D10M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D9M6D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3MDM32D", "sequence": "MDDAAGEEEASMFETSHVLGALLASSPLLARAWDRCAAATAAASGLVHGEDGGTVYVGFSGVQAALSAAGAAVAGGGADAFAPVGLGGDATRRMFAPLVANAEPDAAAVGEQVAVQALALQCFLKLCGSPDFQMLLDQIRGKAVVFTGHSLGGAIAALAALHYLCISSSSSTWGPAPSVLCVTFGSPLLGNEALSRAILRERWGGNFCHVVSQHDVVPRLLFCPLDAVPAHVIVGMQLQQWPAARTRHAGAVTAVTATARAADADRDALRQLVQTHVGAVAMDQKLADPAAPSGGPYRPFGTYVMCTPDGAVCVDNPTAAVQMLYATFASRCSPGSESPEAAHSCYGDLVVKMPQHLLLRRRPRADDDAPVIASNYDAGVSLALEASGIHAMVRAAHATEASTARQWLRTSRRAGRRPSLNCAQLATKLGRITPLRAQIEWYKALFDGEMGYYDAFKKQRSPKKFGKANMCRFKLGLFWDGVLAMLDAGQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRRNLHRTQGRYMTHGRERRYELFDRWWQEKGCIGGGDVASSMSSAASRRRRSKNAGLTQDPCFWARVEEARERTESARSERDAAVLAMMLEELQEFESYSRELVASKEVSTDVLAPQSSYTLWVEEWNQLKLRDEVRAILLQF", "taxon_id": 4555, "system_name": "setaria_italica", "assembly": "JGIv2.0", "left_index": 188, "right_index": 189, "representative": { "id": "Si026081m.g", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 131, "end": 226, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345312, "distance_to_parent": 0.032952, "node_type": "speciation", "bootstrap": 16, "node_taxon_id": 147429, "node_taxon": "Andropogoneae", "left_index": 178, "right_index": 187, "children": [ { "node_id": 633796, "distance_to_parent": 0.004936, "protein_stable_id": "Sb05g005970.1", "gene_stable_id": "Sb05g005970", "gene_description": "Putative uncharacterized protein Sb05g005970 [source:UniProtKB/TrEMBL;Acc:C5Y6S1_SORBI]", "cigar": "960D19M10D10M82D4M41D7M123D24M20D15M16D4MD38M5D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D27M3D28M303D25M3D2MD23M5DM2DM2D3MD11M2D18M3D2MD2M7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D14MD4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3MDM32D", "sequence": "MDDASGDEEASMFETSHVLGALLASSPLLARAWDRCTAATAAAPGFVVHGEDEDGGGKVYVGFSGVQAALSAAGAAVAGGGRGADVFAPVGLGGGGDAAAGRMFAPLVAAEPDAPAAAAGEPVAVQALALQCFLKLCGSPDFQMLLNEIRGKAVVFTGHSLGGAIAALAALHYLCISSASSPWAPAPPVLCVTFGSPLLGNEALSRAILRERWGGNFCHVVSQHDVVPRLLFCPPDAIPADIIVGMQLHQWPARTRQTGAVTTVTARMAHTDKDVLRQLIQKHVGAVAMEQKLAAPDETTGGSPYRPFGTYVLCSPEGAACVDNATAAVQMLYATFASRSSPGAESPEAAHSCYGELVLKMPQHLLLKRRLRVDDAPASPNYDDGVSLALEASGIDAMAMEASTARQWLKTSKRAGRRPSLNCARLATQLGRITPCRAQIEWYKALFDAEMGYYDAFKQRRSPRKYGKVNLNRIKLGQFWDRVLTMLDAGQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHHHGLHRTSGSYMTHGRERRYELFDRWWQEKACTGGAGGDVTSSMSSAAASASSRRRSKYAGLTQDPCFWARVEEAREQTESARSERDVAELAMKLEELQEFESYSRELVASKEVSVDVLAPQSSYTLWVEEWNQLKLRDEVRAMLLRF", "taxon_id": 4558, "system_name": "sorghum_bicolor", "assembly": "Sorbi1", "left_index": 185, "right_index": 186, "representative": { "id": "Sb05g005970", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 142, "end": 236, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345314, "distance_to_parent": 0.006451, "node_type": "duplication", "bootstrap": 16, "duplication_confidence_score": 1, "node_taxon_id": 4577, "node_taxon": "Zea mays", "left_index": 179, "right_index": 184, "children": [ { "node_id": 633827, "distance_to_parent": 0.035284, "protein_stable_id": "GRMZM2G014071_P01", "gene_stable_id": "GRMZM2G014071", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7U932]", "cigar": "960D19M10D10M82D4M41D7M127D20M22D13M16D4MD15M3D18M7D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D27M3D28M304D24M3D2MD23M5DM2DM2D3MD11M2D18M3D2MD2M7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D11M4D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3MDM32D", "sequence": "MDDAAGEEEASMFETSHVLGALLASSPLLASAWDRCTTATAAAPGFVHGEDGGKVYVGFSGVQAALSAAGAAVAGGGADVFAPVGLGGDAAGRMFAPLLAAEPDSSAAGEPVAVQALALQCFLKLCGNPDFQMLLNEIRGKAVMFTGHSLGGAIATLAALHYLCISSSSSPWSPAAPVLCVTFGSPLLGNEALSRAILRERWGGNFCHVVSQHDVVPRLLFCPPDAVPAHIIVGMQLDQWPARTRHTGAVNTVTTRMADTDKNALQQLIQTHMAAVAMEQKLATPETTGGSPYRPFGTYVLCSPEGAACVDNATAAAQMLYATFASRSSPGAESPEAAHSCYGELVLKMPQHLLLKRCLRVDDTRATPNYDDGVSLALEASGIDATAMEASTARQWLKTSKRAGRRPSLNCACLATQLGRITPLRAQIEWYKAVFDAEMGYYDAFKQRRSPRKYSKVNLNRMKLGQFWDGVLTKLDAGQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHHQGLHRTSGSYMTHGRERRYELFDRWWQEKACTGAGGDITSSMLAASASSRRRSKYAGLTQDPCFWARVEEAREETESARGERDVAELAMKLEELQEFERYSRELVANKEVSVDVLAPQSSYTLWVEEWNQLKLRDEVRTLLLQF", "taxon_id": 4577, "system_name": "zea_mays", "assembly": "AGPv3", "left_index": 182, "right_index": 183, "representative": { "id": "GRMZM2G014071", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 131, "end": 225, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633813, "distance_to_parent": 0.03254, "protein_stable_id": "GRMZM2G152739_P01", "gene_stable_id": "GRMZM2G152739", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:B4FPV7]", "cigar": "960D19M10D10M82D4M41D7M127D20M22D13M16D4MD15M3D18M7D15M3D3M11D6M25D6M12D2MD21M6D21MD11MD11MD18M14D27M3D28M304D24M3D2MD23M5DM2DM2D3MD11M2D19M2D2MD2M7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D11M4D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D3M57D", "sequence": "MDDAAAEEEASMFETSHVLGALLASSPLLARAWDRCTAASAAAPWFVHGEDGGKVYVGFSGVQAALTAAGAAVAGGGADIFAPVSLGGDAAGRMFAPLVAAEPDPAATGEPVAVQALALQCFLKLCCSPDFQMLLNQIRGKAVVFTGHSLGGAVAALTALHYLCISSSSSPPAPPVLCVTFGSPLLGNEALSRAILREHWGGNFCHVVSQHDVVPRLLFCSPDAVPAHIIVGMQLQQWPAWTRHTGAVSTVTAHMADTDKDVLRQLIQTHVGAVAVEQKLAASETTGGSPYRPFGTYVLCSPEGAACVDNPTAAVQMLYATFASQSSAGAESPEAAHSCYGELVLKMPHHLLLKRWLRVDDDMPATPNYDDGVSLALEASGIDVMAMEASTARHWLKTSKRAGRRPSLNCARLATQLGRVTPCRAQIEWYKALFDAEMGYYDAFKQRRSPRKYTKVNLNRIKLGQFWDRVLSMLDAGQLPHDFHRRAKWVNASRFYQLLVEPLDIADYHRHGHHLTSGSYMTHGRERRYELFDRWWHEKGCTGAGGGITSSMSAASASSRRRSKYAGLTQDPCFWARVEEAREQTESARRERDVAELAMKLEELQEFERYSRELVATKEVSVDVLAPQSSYTLWVEDWNQLKLRAQG", "taxon_id": 4577, "system_name": "zea_mays", "assembly": "AGPv3", "left_index": 180, "right_index": 181, "representative": { "id": "GRMZM2G152739", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 130, "end": 223, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GRMZM2G152739", "score": 0.03254 } } ], "representative": { "id": "Sb05g005970", "score": 0.004936 } } ], "representative": { "id": "Sb05g005970", "score": 0.03788800000000001 } }, { "node_id": 6345316, "distance_to_parent": 0.0206, "node_type": "speciation", "bootstrap": 29, "node_taxon_id": 359160, "node_taxon": "BEP clade", "left_index": 103, "right_index": 176, "children": [ { "node_id": 6345317, "distance_to_parent": 0.056664, "node_type": "speciation", "bootstrap": 36, "node_taxon_id": 147380, "node_taxon": "Oryzeae", "left_index": 130, "right_index": 175, "children": [ { "node_id": 633704, "distance_to_parent": 0.058978, "protein_stable_id": "LPERR11G05140.1", "gene_stable_id": "LPERR11G05140", "cigar": "959D20M10D10M82D4M41D7M115D3M2D27M25D10M16D4MD16M2D18M7D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D5MDM30D", "sequence": "MEDARGGEEENSMFETSHVLGALLASSPLLARAWDRCVAAADAAGGGGGGASPGFVHDGGEEGGSVYVAFSGVQAALSAAAAGCGADLFNPVGLRGDAAAARLFAPLVAAEPEDPAGGEPVAVQALALRGFLRLCGSPEFQMLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSTFAPAPPVLCVTFGSPLLGNDTLNRAILRERWAGNFCHVVSQHDVVPRLLFCPLNAVPAHIIIGMQLHQLPVRARRAAGVVATVTACMADTNQEALRQLIQEHAGAAAIEQKLATQETQGRSPYRPFGAYVLCSPGGAACVDNPTAAVQMLYATFAARCAPETGAASPEAAHSCYGELVLSIPQHLLLKRRLGATAITPAVSNYDAGISLALEASGITVEVMEAAPARQWLKTSKRAGQSPSLNCASLARRLGRITPCRAQIEWYKAAFDTNTGYYDAFKQRLSPKKFAKANMYRIKLGQFWDGVLSMLDTSQLPHDFHRRAKWVNAAHFYQLLVEPLDIADYHRSNLHRTRGSYIIHGRERRYELFDKWWKQRGFTGIATGDTSASTAARRSKFAGLTQDPCFWARVEEAREQTESAKSERNATVLAMMLECLHKFECHSSELVESKDVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQFQS", "taxon_id": 77586, "system_name": "leersia_perrieri", "assembly": "Lperr_V1.4", "left_index": 173, "right_index": 174, "representative": { "id": "LPERR11G05140", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 138, "end": 234, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345318, "distance_to_parent": 0.017317, "node_type": "speciation", "bootstrap": 19, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 131, "right_index": 172, "children": [ { "node_id": 633767, "distance_to_parent": 0.068362, "protein_stable_id": "OB11G14570.1", "gene_stable_id": "OB11G14570", "cigar": "954D25M102D4M41D7M123D24M25D10M16D4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MKCYASSPPCKVRDQPCPRRAAGLLAAAGAGVGPVRGGGRRRRRVLAGVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLREDAAGRFFAPLVAAEPEDADGEPVAVQALALQGFSRLCSSPEFQVLLNQIRGKAVVFTGHSLGGAIATLVALHYLCTLSSSSACAPAPPVLCVTFGSPLLGNEALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVTPAHIAVGLQLHQLPVRARRAAGVVATVTARMADTNQESLRQLILEHAGAAAIEQKLAAPVIRGGSPYRPSGAYVLCSPDGAACVDNLTAAVQMLYATFAAWCPPVTGAASPEAAHSCYGDLVVSMPHHLLLKRRLDTTATVPAASNYDVGISLALEASGIAGETTEAAPVRHWLKTSKRVCRSPSLNCASLARRLGRITPCRAQIEWYKASFDGDTGYYDAFKQRLSPKKFSNANMNRIKLAQFWDGVLAMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYYRNNLHRTRGSYITHGRERRYELFDKWWNQKGCTGVGTGDTSAAMAARRSKFAGLTQDPCFWAKVEEALEQVECAKSERDTAVLAMMLERLHKFERYSSELVENKDISIDVVAPQSSYSLWVNEWSELKLRDEVRTVLFQF", "taxon_id": 4533, "system_name": "oryza_brachyantha", "assembly": "Oryza_brachyantha.v1.4b", "left_index": 170, "right_index": 171, "representative": { "id": "OB11G14570", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 125, "end": 221, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345320, "distance_to_parent": 0.020245, "node_type": "speciation", "bootstrap": 2, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 132, "right_index": 169, "children": [ { "node_id": 633794, "distance_to_parent": 0.018782, "protein_stable_id": "OPUNC11G05430.1", "gene_stable_id": "OPUNC11G05430", "cigar": "872D107M10D10M82D4M41D7M120D27M21D13M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MQNPPNYLTKMVAEHFQKKKKGRTKLSAHEPISSHLTCCPHSPRGEDHQIKLDHFISLSPSSLSLLSLEASSLSLYPISGKLTAQPAMEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGSGGEGEPVYVAFSGVQAALSAAGAAVGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPIAVQELALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGTIAALVTLHYLCTSLSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVVPVHIVVGMQLHQLPVRARRAPGVVAMVTARMADTNQESLRQLIQEHAGEAAIEQKIAAPEIPGGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARCAPETGAVSPEAAHSCYGDLVLSMPHHLLLKRRLGAAATAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLARRLGRITPCRAQIEWYKASFDANTGYYDAFKQRLSLKKFSKANMYRIKLAQFWDGVLAMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIANYHRNNLHHTRGSYITHGRERRYELFDKWWKQKGCTGAGTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKTERDLTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 4537, "system_name": "oryza_punctata", "assembly": "AVCL00000000", "left_index": 167, "right_index": 168, "representative": { "id": "OPUNC11G05430", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 224, "end": 321, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345322, "distance_to_parent": 0.011446, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 133, "right_index": 166, "children": [ { "node_id": 633740, "distance_to_parent": 0.013515, "protein_stable_id": "OMERI11G04630.1", "gene_stable_id": "OMERI11G04630", "gene_display_label": "OMERI11G04630", "cigar": "959D20M10D10M82D4M41D7M122D25M24D10M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGEGEPVCVAFSGVQAALSAAAGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVVPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEYAGEAAIEQKLAAPEIPRGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARHAPETGAVSPEAAHSCYGDLVLSMPHHLLLKKRLGATATTPATSNYDVGISIALEASGITGEATEAALARQWLKTSKRVGRSPSLNCASLARRLGRITPCRAQIEWYKASFDANIGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLAMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEVREQTESAKSERDMTLLARVLKDLHKFERRSSELVESKEVSIDVIAPQSSYSLWVKEWNELKLRDEVRTISFQF", "taxon_id": 40149, "system_name": "oryza_meridionalis", "assembly": "Oryza_meridionalis_v1.3", "left_index": 164, "right_index": 165, "representative": { "id": "OMERI11G04630", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 132, "end": 229, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345324, "distance_to_parent": 0.007303, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 134, "right_index": 163, "children": [ { "node_id": 633790, "distance_to_parent": 0.026263, "protein_stable_id": "KN538683.1_FGP039", "gene_stable_id": "KN538683.1_FG039", "cigar": "1083D2M294D15M5DM11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DM8D2M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MWPILVDKSYLHFLDVFVEPSKVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 4528, "system_name": "oryza_longistaminata", "assembly": "GCA_000789195.1", "left_index": 161, "right_index": 162, "representative": { "id": "KN538683.1_FG039", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 24, "end": 116, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345325, "distance_to_parent": 0, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 135, "right_index": 160, "children": [ { "node_id": 633748, "distance_to_parent": 0.002096, "protein_stable_id": "OGLUM11G05500.1", "gene_stable_id": "OGLUM11G05500", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "959D20M10D10M82D4M41D7M120D27M24D10M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 40148, "system_name": "oryza_glumaepatula", "assembly": "ALNU02000000", "left_index": 158, "right_index": 159, "representative": { "id": "OGLUM11G05500", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 134, "end": 231, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345328, "distance_to_parent": 0, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 136, "right_index": 157, "children": [ { "node_id": 633761, "distance_to_parent": 0.025566, "protein_stable_id": "OBART05G17080.1", "gene_stable_id": "OBART05G17080", "cigar": "880D99M10D10M82D31M13D8M58D60M2D82MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D13M4D4M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MTHHTKFNPNYISICNPASSLSLIFTSLFLSWKRVRGSRRGDFCKEMGENGVVASKLCYPAAAMEVVAAELGHTAGSKLYDDDGRLKRTGTMWTASAHIITAVIGSGVLSLGWAIAQLGWVAGPAVMLLFSFVTYYTSALLADCYRSGDESTGKRNYTYMDAVNANLSGIKVQVCGFLQYANIVGVAIGYTIAASISMLAIKRANCFHVEGHGDPCNISSTPYMIIFGVAEIFFSQIPDFDQISWLSILAAVMSFTYSTIGLGLGVVQVVANGGVKGSLTGISIGVVTPMDKIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSALAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTENAKSERDMTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEIRTILFQF", "taxon_id": 65489, "system_name": "oryza_barthii", "assembly": "ABRL00000000", "left_index": 155, "right_index": 156, "representative": { "id": "OBART05G17080", "score": 0 }, "domains": [ { "interpro": "IPR013057", "start": 88, "end": 282, "name": "AA_transpt_TM", "id": 13057 }, { "interpro": "IPR029058", "start": 341, "end": 438, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345329, "distance_to_parent": 0, "node_type": "duplication", "bootstrap": 0, "duplication_confidence_score": 0.25, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 137, "right_index": 154, "children": [ { "node_id": 6345336, "distance_to_parent": 0.001212, "node_type": "speciation", "bootstrap": 48, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 148, "right_index": 153, "children": [ { "node_id": 633826, "distance_to_parent": 0.066325, "protein_stable_id": "BGIOSGA025494-PA", "gene_stable_id": "BGIOSGA025494", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A2YK45]", "cigar": "959D20M10D10M82D4M41D7M120D27M23D11M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D7M398D6M50D5M93D", "sequence": "MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGVKSGVKLWSCLNPAPQL", "taxon_id": 39946, "system_name": "oryza_indica", "assembly": "ASM465v1", "left_index": 151, "right_index": 152, "representative": { "id": "BGIOSGA025494", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 50, "end": 85, "name": "AB_hydrolase", "id": 29058 }, { "interpro": "IPR029058", "start": 117, "end": 232, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633735, "distance_to_parent": 0, "protein_stable_id": "OS11T0195500-01", "gene_stable_id": "OS11G0195500", "gene_description": "Lipase family protein, expressed; Lipase, putative [Source:UniProtKB/TrEMBL;Acc:Q53LH1]", "cigar": "962D17M10D10M82D4M41D7M120D27M24D10M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD4M214D", "sequence": "MLLLRRRLARFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCRSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERR", "taxon_id": 39947, "system_name": "oryza_sativa", "assembly": "IRGSP-1.0", "left_index": 149, "right_index": 150, "representative": { "id": "OS11G0195500", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 131, "end": 228, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "OS11G0195500", "score": 0 } }, { "node_id": 6345330, "distance_to_parent": 0, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 138, "right_index": 147, "children": [ { "node_id": 633705, "distance_to_parent": 0.004902, "protein_stable_id": "ORUFI11G05550.1", "gene_stable_id": "ORUFI11G05550", "cigar": "959D20M10D10M82D4M41D7M120D27M24D10M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCRSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIADYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTSLARMLEDLHKFERHSSELVENKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 4529, "system_name": "oryza_rufipogon", "assembly": "PRJEB4137", "left_index": 145, "right_index": 146, "representative": { "id": "ORUFI11G05550", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 134, "end": 231, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345333, "distance_to_parent": 0.004204, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 4527, "node_taxon": "Oryza", "left_index": 139, "right_index": 144, "children": [ { "node_id": 633724, "distance_to_parent": 0.13173, "protein_stable_id": "BGIOSGA025495-PA", "gene_stable_id": "BGIOSGA025495", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A2YK47]", "cigar": "1463D21M28D38M407D14M18D3M2D3MD11M2D21M2DM8D2M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MTSAQNAVKIAIVAVEAIAALVLGALPLGEDDVADERHDGLHLPRLPPPPDQLAVVHLAEAQRVAERRQAAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIAHYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 39946, "system_name": "oryza_indica", "assembly": "ASM465v1", "left_index": 142, "right_index": 143, "representative": { "id": "BGIOSGA025495", "score": 0 }, "domains": [] }, { "node_id": 633843, "distance_to_parent": 0, "protein_stable_id": "ONIVA08G21510.1", "gene_stable_id": "ONIVA08G21510", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "959D20M10D10M82D4M41D7M120D27M23D11M15DMD4MD15M3D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D28M2D28M304D24M3D2MD23M5D4M2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D4M33D", "sequence": "MEDASRGEEENSMFETSHVLGALLASSPLLARAWDRCAAAADGGASSLGFVHGGGGGGEGEPVCVAFSGVQAALSAAAGGGGGGAEIFKPVGLRGDAAGRLFAPLVAAEPEDAGGEPVAVQALALQGFLRLCGSPEFQVLLNQIRGKAVVFTGHSLGGAIAALVALHYLCTSSSSSAFAPAPPVLCVTFGSPLLGNQALSRAILRERWAGNFCHVVSQHDVVPRLLFCPLNVIPVHIVVGMQLHQLPVRARRAAGVVATVTARMADTNQESLRQLIQEHAGEAAIEQKLAAPEIPSGSPYRPFGAYVLCSPDGAACVDNPTAAVQMLYATFAARRAPETGAVPPEAAHSCYGDLVLSMPHHLLLKRRLGATVTAPAASNYDVGISIALEASGITGEATEAAPARQWLKTSKRVGRSPSLNCASLATRLGRITPCRAQIEWYKALFDANTGYYDAFKQRLSPKKFSKANMYRIKLAQFWDGVLSMLDTSQLPYDFHRRAKWVNAAHFYQLLVEPLDIAHYHRNNLHRTRGSYITHGRERRYELFDKWWKQKGCTDPSTGDTSATTTARRSKFAGLTQDPCFWARVEEAREQTESAKSERDMTLLARMLEDLHKFERHSSELVESKEVSIDVVAPQSSYSLWVKEWNELKLREEVRTILFQF", "taxon_id": 4536, "system_name": "oryza_nivara", "assembly": "AWHD00000000", "left_index": 140, "right_index": 141, "representative": { "id": "ONIVA08G21510", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 135, "end": 232, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "ONIVA08G21510", "score": 0 } } ], "representative": { "id": "ONIVA08G21510", "score": 0.004204 } } ], "representative": { "id": "OS11G0195500", "score": 0.001212 } } ], "representative": { "id": "OS11G0195500", "score": 0.001212 } } ], "representative": { "id": "OS11G0195500", "score": 0.001212 } } ], "representative": { "id": "OS11G0195500", "score": 0.001212 } } ], "representative": { "id": "OS11G0195500", "score": 0.008515 } } ], "representative": { "id": "OPUNC11G05430", "score": 0.018782 } } ], "representative": { "id": "OPUNC11G05430", "score": 0.039027 } } ], "representative": { "id": "OPUNC11G05430", "score": 0.056344 } }, { "node_id": 6345339, "distance_to_parent": 0.028585, "node_type": "speciation", "bootstrap": 90, "node_taxon_id": 147368, "node_taxon": "Pooideae", "left_index": 104, "right_index": 129, "children": [ { "node_id": 633728, "distance_to_parent": 0.065402, "protein_stable_id": "BRADI4G23367.1", "gene_stable_id": "BRADI4G23367", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "963D16M10D10M82D4M41D7M120D27M23D12M16D4MD16M2D17M8D15M3D3M11D6M25D6M12D2MD21M4D23MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D19M2D3MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D5M32D", "sequence": "MEDAEEISMFETSHVLGALLASSPLLARAWDRCAAAAAMGAASPGFVYGGGGGDDGGTVYVAFSGVQAALSVAGAAVASGADVFAPVGLAGDAAGARAFPQLAAAEPDAAAGDPVAVQALALRCFLKLCGSPEFQMLLNQIRGKGVVFTGHSLGGAIATLAALHYLCISSSSSAYATAPPVLCVTFGSPLLGNEALSRAILRERWGGNFCHVVSQHDVVPRLLFCPLDAVPVRIIVGLQLQQWPGCTRHVGTVTNSVEDAEQEALQQLIQAHSRVVAMEQKLAAPEMRGGSPYRPFGAYVLCSPDGAACVDGLTAAVQMLYATFAAKCVSGSVKSLEAAHSCYGDLVLKMPQHLVLKRRPRAVDVLAAVSNSNYDAGISLALEASGIDGEATGATTVRHWLKASKRAGRSPSLNCAGLATRLGRITPCRAQIEWYKASFDGDTGYYDAFKQRRSPKKFHKANIYRIKLGQFWDGVLTMLETSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRNNLHKTRGSYITHGRERRYELFDKWWKGKGTFTGCTSDTSTTASRTRSKYAGLTQDPCFWARVEDAREQTESAAAGHDAVALATKLESLREFEHYAAELVESKEVSIDVLAPQSSYSLWLEEWKELKLSDEARTSSLFQF", "taxon_id": 15368, "system_name": "brachypodium_distachyon", "assembly": "v1.0", "left_index": 127, "right_index": 128, "representative": { "id": "BRADI4G23367", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 133, "end": 229, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345341, "distance_to_parent": 0.086365, "node_type": "speciation", "bootstrap": 22, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 105, "right_index": 126, "children": [ { "node_id": 633720, "distance_to_parent": 0.025088, "protein_stable_id": "MLOC_1340.1", "gene_stable_id": "MLOC_1340", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "1354D8M98D2MD21M4D23MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D13M2D9MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D4M11D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MLLNQIRGKAVVFTGHSLGGAIAALAALHYLCITSLSSPCSPSPPVLCVTFGSPLLGNEALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAVPVHVIIGMQLQQWAGHTHNTGVMTTRVVDAEQEGLRQLIQAHVRMVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAVCVDNSTAAVQMLYATFVACYAQGDTTSLGAAHSCYGDLVLKMPQNLLLKRRPRAMDVLASMSNSNYDAGISLAMEASGIGSEAMEATMTRYWLKASKRAGRSPSLNCAGLAIRLGRITPCRAQVEWYKASFDGNMGYYDAFKQRRSPKKFNKADMCRIKLGQFWDGVLAMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIAHYHRNNLHRTRGGYITHGRDRRYELFDKWWKEKGAFTGTSTGDMAATARSKYAGLTQDPCFWARVEEARDQTESAQAEQDVAMLAMKLGRLREFERYARELVEGKEVSIDVLAPQSSYTLWVEEWKKLLLRDEARAASLF", "taxon_id": 112509, "system_name": "hordeum_vulgare", "assembly": "082214v1", "left_index": 124, "right_index": 125, "representative": { "id": "MLOC_1340", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 3, "end": 93, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345342, "distance_to_parent": 0.007087, "node_type": "speciation", "bootstrap": 21, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 106, "right_index": 123, "children": [ { "node_id": 6345345, "distance_to_parent": 0.030584, "node_type": "speciation", "bootstrap": 99, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 113, "right_index": 122, "children": [ { "node_id": 633755, "distance_to_parent": 0.014196, "protein_stable_id": "Traes_4BS_B65D6CC31.2", "gene_stable_id": "Traes_4BS_B65D6CC31", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "1354D8M98D2MD21M5D22MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D19M2D3MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MLLNQIRGKAVVFTGHSLGGAIAALAALHYLCISSLSSSCSPSPVLCVTFGSPLLGNEALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAVPVRVIIGMQLQQWPGHTHNTGVMTIRVVDADQEGLRQLIQAHVRTVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAVCVDNSTAAVQMLYATFAACYARGDTSSLEAAHSCYGDLVLKMPQNLLLKRRPHGMDVLASMSNSNYDAGISLAMEASGIGSEATEATTARYWLKASRRAGRSPSLNCAGLSTRLGRITPCRAQIEWYKASFDADIGYYDAFKQQRSPKKFGKANIYRLKLGQFWDGVLTMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRNNLHKTRGGYITHGRDRRYELFDKWWKEKGDFSGTSTGDTSVTATARSKYAGLTQDPCFWARVEEAWDQTESAQAEYDVAMLAMKLGRLREFERYARELVESKEVSIDVLAPQSSYTRWVEEWKKLLLRDEARTASLF", "taxon_id": 4565, "system_name": "triticum_aestivum", "assembly": "IWGSC1.0+popseq", "left_index": 120, "right_index": 121, "representative": { "id": "Traes_4BS_B65D6CC31", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 3, "end": 95, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345347, "distance_to_parent": 0.018067, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 147389, "node_taxon": "Triticeae", "left_index": 114, "right_index": 119, "children": [ { "node_id": 633727, "distance_to_parent": 0.011951, "protein_stable_id": "EMT29807", "gene_stable_id": "F775_09760", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M8CQK4]", "cigar": "972D7M13D7M82D4M41D7M124D23M26D9M16D4MD16M2D18M7D15M3D3M11D6M30DM12D2MD21M5D22MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D13M2D9MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MAVGSLGVGPPSPPGTGWGRSPSLALSSAAPFPGSSPACHGRRRRKFHAALSVARPAVASGADVFAPVGLGGDAAGAQAFPQLAASEPDAAAAGERVAVQALALRCFLKLCGSPEFQIRGKAVVFTGHSLGGAIAALAALHYLCISSLSSSCSPSPVLCVTFGSPLLGNEALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAVPVHVIIGMQLQQWPGHTHHTGVMTTRVVDAEQEGLRQLIQAHVRTVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAACVDNSTAAVQMLYATFAACYTRGDTTSLEAAHSCYGDLVLKMPQNLLLKRHLHAMDVLASMSNSNYDAGISLAMEASGIGSEATEATTARYWLKASKRAGRSPSLNCAGLSTRLGRITPCRAQIEWYKASFDADMGYYDAFKQQRSPKKFGKANIYRLKLGQFWDGVLTMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRNNLHKTRGGYITHGRDRRYELFDKWWKEKGAFSGTSTGDTSVTATARSKYAGLTQDPCFWARVEEAWDQTESAQAEHDVAMLAMKLGRLREFERYARELVESKEVSIDVLAPQSSYTRWVEEWKKLLLRDEARTASLF", "taxon_id": 37682, "system_name": "aegilops_tauschii", "assembly": "GCA_000347335.1", "left_index": 117, "right_index": 118, "representative": { "id": "F775_09760", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 55, "end": 214, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633737, "distance_to_parent": 0, "protein_stable_id": "Traes_4DS_51C30A490.1", "gene_stable_id": "Traes_4DS_51C30A490", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "1411D6M25D6M12D2MD21M5D22MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D19M2D3MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D6M9D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MTIQMLLNQIRGKAVVFTGHSLGGAIAALAALHYLCISSLSSSCSPSPVLCVTFGSPLLGNEALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAVPVHVIIGMQLQQWPGHTHHTGVMTTRVVDAEQEGLRQLIQAHVRTVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAACVDNSTAAVQMLYATFAACYTRGDTTSLEAAHSCYGDLVLKMPQNLLLKRHLHAMDVLASMSNSNYDAGISLAMEASGIGSEATEATTARYWLKASKRAGRSPSLNCAGLSTRLGRITPCRAQIEWYKASFDADMGYYDAFKQQRSPKKFGKANIYRLKLGQFWDGVLTMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRNNLHKTRGGYITHGRDRRYELFDKWWKEKGAFSGTSTGDTSVTATARSKYAGLTQDPCFWARVEEAWDQTESAQAEHDVAMLAMKLGRLREFERYARELVESKEVSIDVLAPQSSYTRWVEEWKKLLLRDEARTASLF", "taxon_id": 4565, "system_name": "triticum_aestivum", "assembly": "IWGSC1.0+popseq", "left_index": 115, "right_index": 116, "representative": { "id": "Traes_4DS_51C30A490", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 3, "end": 96, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Traes_4DS_51C30A490", "score": 0 } } ], "representative": { "id": "Traes_4BS_B65D6CC31", "score": 0.014196 } }, { "node_id": 6345343, "distance_to_parent": 0.029606, "node_type": "speciation", "bootstrap": 99, "node_taxon_id": 4564, "node_taxon": "Triticum", "left_index": 107, "right_index": 112, "children": [ { "node_id": 633716, "distance_to_parent": 0.054278, "protein_stable_id": "TRIUR3_06721-P1", "gene_stable_id": "TRIUR3_06721", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M7ZWJ6]", "cigar": "1268D12M101D13M19D4M25D6M12D2MD21M4D23MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M8D10M145D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D4M11D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MEDAEENSMNFGVTHGQQMRMIESSMEMLLNQIQGKAVVFTGHSLGGAIAALAALHYLCISSLSSPCSPSPPVLCVTFGSPLIGNGALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAIPVRVIIGMQLQQWPGHTHNTGVMTTRVVDAERDGLRQLIQAHVRTVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAVCVDNSTAAVQMLYATFAACYARGDTTSLEAAHSCYGDLVLKMPQNLLLKRRPHAMDVEWYKASFDGDMGYYDAFKQRRSPKKFNMADMCRIKLGQFWDGVLAMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRKNFHKTRGGYITHGRDSRYELFDKWWKEKGAFTGTSTGDTAATARSKYAGLTQDPCFWARVEEAWDQTESAQAEQDVAMLAMKLGRLREFEQYARELVESKEVSIDVLAPQSSYTRWVEEWKKLLLRDEARTASLF", "taxon_id": 4572, "system_name": "triticum_urartu", "assembly": "GCA_000347455.1", "left_index": 110, "right_index": 111, "representative": { "id": "TRIUR3_06721", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 12, "end": 121, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633803, "distance_to_parent": 0.01306, "protein_stable_id": "Traes_4AL_52A7262C9.2", "gene_stable_id": "Traes_4AL_52A7262C9", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "1277D3M101D13M19D4M25D6M12D2MD21M4D23MD11MD11MD18M14D24M6D28M304D24M3D2MD23M5DMD2M2D3MD11M2D19M2D3MDM7D5M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D4M11D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D4M9D2M8D3M34D", "sequence": "MFLDKFSNASKIFTCLHLMLLNQIQGKAVVFTGHSLGGAIAALVALHYLCISSLSSPCSPSPPVLCVTFGSPLIGNGALSRAILRERWGGNFCNVVSQHDVVPRLLFCPLDAIPVRVIIGMQLQQWPGHTHNTGVMTTRVVDAEQDGLRQLIQAHVRTVAMEQKLVDPESRGGSPYRPFGAYVLCSPEGAVCVDNSTAAVQMLYATFAACYARGNTTSLEAAHSCYGDLVLKMPQNLLLKRRPHAMDVLASMSNSNYDAGISLAMEASGIGSEAMEATTTRYWLKASKRAGRSPSLNCAGLSTRLGRITPCRAQVEWYKASFDGDMGYYDAFKQRRSPKKFNMADMCRIKLGQFWDGVLAMLDNSQLPHDFHRRAKWVNAARFYQLLVEPLDIADYHRKNFHKTRGGYITHGRDSRYELFDKWWKEKGAFTGTSTGDTAATARSKYAGLTQDPCFWARVEEAWDQTESAQAEQDVAMLAMKLGRLREFERYARELVESKEVSIDVLAPQSSYTRWVEEWKKLLLRDEARTASLF", "taxon_id": 4565, "system_name": "triticum_aestivum", "assembly": "IWGSC1.0+popseq", "left_index": 108, "right_index": 109, "representative": { "id": "Traes_4AL_52A7262C9", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 10, "end": 114, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Traes_4AL_52A7262C9", "score": 0.01306 } } ], "representative": { "id": "Traes_4AL_52A7262C9", "score": 0.042666 } } ], "representative": { "id": "MLOC_1340", "score": 0.025088 } } ], "representative": { "id": "BRADI4G23367", "score": 0.065402 } } ], "representative": { "id": "BRADI4G23367", "score": 0.093987 } } ], "representative": { "id": "Sb05g005970", "score": 0.05984900000000001 } }, { "node_id": 6345351, "distance_to_parent": 0.07472, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 214687, "node_taxon": "Musa acuminata subsp. malaccensis", "left_index": 96, "right_index": 101, "children": [ { "node_id": 633744, "distance_to_parent": 0.10053, "protein_stable_id": "GSMUA_Achr6P12900_001", "gene_stable_id": "GSMUA_Achr6G12900_001", "gene_description": "lipase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G12900_001]", "cigar": "960D19M10D10M82D4M41D7M127D20M25D10M16D4MD11M7D11M14D15M3D3M11D6M25D6M12D2MD21M5D22MD11MD11MD18M43D29M310D18M3D2MD22M9DM2D3MD11M2D21M2DMDM10D2M6D7MD8M16D5M22D12M5D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D2M13D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D11M18DMD6M23D", "sequence": "MDGLKVEEEHCMFETSHVLGALLASSPLLTQAWGRCVHANAGSSSFVLQRCDDAVYVAFSSTPSSTPTALGGGFFDLVPISSGGHELFAPLEGAAHPVLVQAGALRLFLSSYRSPDFQMLITETRNKSVIFTGHSVGGSIASLAALYFLCSSSRPDAPSPASLVCITFGSPLLGDETLSRAILRERWGGRFCHVVSQHDIMPRLLFCPFPRPALQLTDDQKAELQGYISMHIGAAASEQTQHISPYRPYGNYALCSAEGAVCIDDPLVAAKMLHLTFTTGSASISFEEQHISYGNLVVELSQNLQFRRRLHLEDDAPKSNRSAGVSLALETSGIGIQDMGAMEAREWLEMSMCRRPKLQCASLAIKLAKVTPCRAQIEWYKALCDDDTGYYDSFKLRRASKKDARVNMNRIRLGQFWDELLDMIQNNNLPPDFHKRSKWVNAAQFYKLLVEPLDIAEYYRCQWPRTRRHYLTHGRERRYEVFDRWWNDRNKEAPEKAAAHRKRSKFAGLTQDSCFWAKVEEARDSVKNAWAEKNPTKLVKLWENLHGFESYANGLIRRKEVSVDVLAPRSSYSLWVEELKDLKSKQACRLPSSSVLVGVTGGT", "taxon_id": 214687, "system_name": "musa_acuminata", "assembly": "MA1", "left_index": 99, "right_index": 100, "representative": { "id": "GSMUA_Achr6G12900_001", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 55, "end": 210, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633732, "distance_to_parent": 0.073603, "protein_stable_id": "GSMUA_Achr2P20660_001", "gene_stable_id": "GSMUA_Achr2G20660_001", "gene_description": "lipase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G20660_001]", "cigar": "968D11M10D10M82D4M41D7M127D20M23D12M16D4MD15M3D15M10D15M3D3M11D6M25D7M5D8MD21M5D22MD11MD11MD14M386D18M3D2MD22M9DM2D3MD11M2D21M2DMDM7DM2D2M6D7MD8M16D5M22D12M5D2M2DM3DM11D2M3D2MD2M4D5M2D10MD6M4D12M2D4M2D2M5D5M3D59MDM2D6MD13MD9MDM2D2M13D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MDM10D15M8D5MDMD27M2D", "sequence": "MAKRFETSHVLGALLAASPLLAQSWSHCTHANASNSSFVVEHHDDTVYVAFSGTQTSALSSSVAGGLGGELFGPVPISTGGGQELFAPLVGGKGDDAQPVLVQAAALHLFLSLYNSSEFQVSSSVNKTGKTQKFCKSVVLTGHSMGGCVASLVALHFLCSSSGSSSPSPASLLCITFGSPLLGDDALSRAVLRERWSGRFCHVVAQHDIMPRLLLCPQISPYRPFGNHALCSAEGAACIDDPFMVVKLLHLTFMVDPGSSSIEEQHISYGDLVAEISQNVLSKKRIHVEEEPTRSSGYSAGVSMALEASGIRIQDMGAVEARECLETRMWRRPNMNCASLAIKLAKVTPCRAQIEWYKTLCDDDMGYYDCFKHRKAAKRDAKVNMNRIKLGHFWDGLLAKLQDNELPHDFHKRSKWVNAAQFYKLLVEPLDIAEYYRCKLHETRGHYLPHGRERRYEVFDRWWNEGKEEVREAATWKKRRSKFAGLTQDSCFWAKVEEARECVKRARAEKNPAKLVKLWESINGFESFANRLMERKEVSVDVMAPRSSYSLWVEEVKELKLKQACSVSSSSGLVGVSGGGHYLTAKRNNKYLTSYQKKTKKKGKYFLCLC", "taxon_id": 214687, "system_name": "musa_acuminata", "assembly": "MA1", "left_index": 97, "right_index": 98, "representative": { "id": "GSMUA_Achr2G20660_001", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 33, "end": 235, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GSMUA_Achr2G20660_001", "score": 0.073603 } } ], "representative": { "id": "GSMUA_Achr2G20660_001", "score": 0.148323 } }, { "node_id": 6345353, "distance_to_parent": 0.106603, "node_type": "speciation", "bootstrap": 9, "node_taxon_id": 1437201, "node_taxon": "Pentapetalae", "left_index": 5, "right_index": 94, "children": [ { "node_id": 6345355, "distance_to_parent": 0.224856, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 4107, "node_taxon": "Solanum", "left_index": 88, "right_index": 93, "children": [ { "node_id": 633713, "distance_to_parent": 0.022247, "protein_stable_id": "Solyc02g032850.2.1", "gene_stable_id": "Solyc02g032850.2", "cigar": "965D14M10D10M82D4M41D7M126D21M25D10M16D4MD6M12D12M13D15M3D3M11D6M25D7M5DM5D2MD21M10D17MD11MD11MD18M44D20M312D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M13D3M9D2M8D5M32D", "sequence": "MVSEASSFESSETLAALVASTPLLEESWKVCGVADASVGCNFAVNRVGETAYVGFSGVKLGAGVDQSCRNLVPLPDELFFSLCVDGPDPAMVHAGLLHLFQSVYIDNLFRDQMVEIMNTSKSIVITGHSIGGAIASLLTLWLLCRLQTICSVICITFGSPMLGNQSFSRAILQKRWAGHFCHVVSQHDIVPRLFFAPSCCFQFISYENKTQLFHVVLDSLGVVSRGECKSSFCPSGSYLFCTNKGAVCVDNGMVVIKLLYFTLLNSSQSSSLEDHLDYADFIQKVQWQFIENRSFTEGSIPKSSYKAGITLALESLGIASHEVNFEDAKEALKKAKKLGRTRNLNSANLAIGLSKINPFRAQIEWFKASCDNSAEQMGYYDSFKQRGASKRGFKVNMNRIKLAQFWDSLIDKLEANELPYDFHKRAKWVNASQFYKLVVEPLDIAEYYRTGMHLVKGHYMQHGRERRYKIFDKWWKTENDTDNPTARSRFASSTQDSCFWARVEEARDSLIKVRAEGDARKFLKMLEDVTKFDQYAKRLIENKEISQDVLAKNSSYTKFIEEWKDLQSQLQLLQPQFP", "taxon_id": 4081, "system_name": "solanum_lycopersicum", "assembly": "GCA_000188115.2", "left_index": 91, "right_index": 92, "representative": { "id": "Solyc02g032850.2", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 74, "end": 197, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633763, "distance_to_parent": 0.011499, "protein_stable_id": "PGSC0003DMT400051170", "gene_stable_id": "PGSC0003DMG400019873", "gene_display_label": "PAD4", "gene_description": "Phytoalexin-deficient 4-2 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019873]", "cigar": "965D14M10D10M82D4M41D7M126D21M30D5M16D4MD11M7D12M13D15M3D3M11D6M25D7M5DM5D2MD21M10D17MD11MD11MD18M44D20M312D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M13D3M9D2M8D5M32D", "sequence": "MESEASSFESSETLAALVASTPLLEESWKVCGVADALVDSNFAVNRVGGTAYVGFSGVKLGAGVDQSCLNLVPLPDELFSSLCLDGADPAMVHAGLLQLFQSVYSDNLFRDQMVEIMNTSKSIVITGHSIGGAIASLLTLWLLCRLQTICSVICITFGSPMLGNESFSRVILQKRWAGHFCHVVSQHDIVPRLFFSPSCSFQFISEENKTQLFRVVLDSLGVVSRGECKSSFCPSGSYLFCTNNGAVCVDNGMVVIKLLYLTLLNGSQSSSLEDHLGYADFIRKVQWQFIENRSFMGGNIPESSYEAGITLALESLGIASHELNSEDAKEALKKAKKLGRTRNLNSANLAIGLSKINPFRAQIEWYKTSCDNSVEQMGYYDSFKQRGASRRGFKVNMNRIKLGQFWDSLIDKLEANELPYDFHKRAKWVNASQFYKLVVEPLDIAEYYRTGMHLVKGHYMQHGRERRYKIFDKWWNTENGTDHPTARSRFASSTQDSCFWAQVEEARDGLIKVRAESDARKFIKMLEDVTKFDQYAKRLIENKEVSQDVLAKNSSYTKFIEEWNDFQSQLQLLQPQFP", "taxon_id": 4113, "system_name": "solanum_tuberosum", "assembly": "3.0", "left_index": 89, "right_index": 90, "representative": { "id": "PGSC0003DMG400019873", "score": -150 }, "domains": [ { "interpro": "IPR029058", "start": 76, "end": 199, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "PGSC0003DMG400019873", "score": -149.988501 } }, { "node_id": 6345357, "distance_to_parent": 0.019198, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 6, "right_index": 87, "children": [ { "node_id": 633779, "distance_to_parent": 0.160295, "protein_stable_id": "VIT_07s0031g02390.t01", "gene_stable_id": "VIT_07s0031g02390", "gene_display_label": "PAD4", "gene_description": "Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6H4E0]", "cigar": "965D14M10D10M82D4M41D7M128D19M28D7M16D4MD12M6D17M8D15M3D4M10D6M25D7M11D2MD21M7D20MD11MD11MD18M13D22M14D19M308D24M3D2MD22M12D3MD11M2D13M3D5M2DMDM6D2M2D2M6D7MD8M16D5M22D15M2D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD11M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M4D7MD4M9D2M8D5MDM30D", "sequence": "MDAETSLFESSEMLATFISSTPVLQDSWRLCSLANTSASVVTDQVRGIAYVAFSGTIMPPLADPSCANLEALDRPPDGLFPPLQQRHAQHQHEDPPMLHAAILHHFLSLYTSPAFLNQILTVIEKSKAVVMTGHSMGGAVASLSALWLLSHLQSTSSALPVLCITFGSPLLGNEALSRAILRERWAGNFCHVVSNHDFVPRLFLAPLPSLSTQQPHFVRQFWHLLMTSLQSVSETIQLFRSVLPFVQASAATTGEGWVKSPFSPFGNYLFFSEEGAVCVNDAAAAVKMLELMFTTASPGSSIEDHLKYGDYVGKASWQLLMRKSFTQGEPPESSYEAGVALAVQSCGLAGQESIAGPAKDCLKMAKRVNPLPPHLNSANLAITLSKNVPYRAQIEWFKASCDKSDDQMGYYDSFKLRGASKKGAKINMNRCLLAGFWDNVIYMLESNQLPHDFNKRAKWVNASQFYKLLVEPLDIAEYYRTGKHRTQGHYLKNGREKRYEIFDRWWKGREAGDEENNKRTSYASLTQDSCFWARVEEAKDWLDQVRSESDTGRSDMLWQDIDRFESYATRLVENKEVSIDVLAKNSSFTLLMEELQDFKKKTQQFPPQFPAFWNEEMVP", "taxon_id": 29760, "system_name": "vitis_vinifera", "assembly": "IGGP_12x", "left_index": 85, "right_index": 86, "representative": { "id": "VIT_07s0031g02390", "score": -50 }, "domains": [ { "interpro": "IPR029058", "start": 34, "end": 222, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345360, "distance_to_parent": 0.012871, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 7, "right_index": 84, "children": [ { "node_id": 6345361, "distance_to_parent": 0.345743, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3700, "node_taxon": "Brassicaceae", "left_index": 50, "right_index": 83, "children": [ { "node_id": 6345363, "distance_to_parent": 0.062977, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3701, "node_taxon": "Arabidopsis", "left_index": 77, "right_index": 82, "children": [ { "node_id": 633797, "distance_to_parent": 0.039481, "protein_stable_id": "AT3G52430.1", "gene_stable_id": "AT3G52430", "gene_display_label": "PAD4", "gene_description": "Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745]", "cigar": "967D12M10D10M82D4M41D7M127DMD18M27D8M16D4MD6M12D11M14D22M10D6M43D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D58MD2M2D6MD13MD9MDM22DMDMDM8D21M2D6MD27M2D6MD14MD5M5D5MD5M9D2M8D5MDMD2M27D", "sequence": "MDDCRFETSELQASVMISTPLFTDSWSSCNTANCNGSIKIHDIAGITYVAIPAVSMIQLGNLVGLPVTGDVLFPGLSSDEPLPMVDAAILKLFLQLKIKEGLELELLGKKLVVITGHSTGGALAAFTALWLLSQSSPPSFRVFCITFGSPLLGNQSLSTSISRSRLAHNFCHVVSIHDLVPRSSNEQFWPFGTYLFCSDKGGVCLDNAGSVRLMFNILNTTATQNTEEHQRYGHYVFTLSHMFLKSRSFLGGSIPDNSYQAGVALAVEALGFSNDDTSGVLVKECIETATRIVRAPILRSAELANELASVLPARLEIQWYKDRCDASEEQLGYYDFFKRYSLKRDFKVNMSRIRLAKFWDTVIKMVETNELPFDFHLGKKWIYASQFYQLLAEPLDIANFYKNRDIKTGGHYLEGNRPKRYEVIDKWQKGVKVPEECVRSRYASTTQDTCFWAKLEQAKEWLDEARKESSDPQRRSLLREKIVPFESYANTLVTKKEVSLDVKAKNSSYSVWEANLKEFKCKMGYENEIEMVVDESDAMET", "taxon_id": 3702, "system_name": "arabidopsis_thaliana", "assembly": "TAIR10", "left_index": 80, "right_index": 81, "representative": { "id": "AT3G52430", "score": -175 }, "domains": [ { "interpro": "IPR029058", "start": 110, "end": 234, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633817, "distance_to_parent": 0.036007, "protein_stable_id": "scaffold_502313.1", "gene_stable_id": "scaffold_502313.1", "gene_display_label": "PAD4", "gene_description": "Phytoalexin deficient 4 [Source:UniProtKB/TrEMBL;Acc:D7LU62]", "cigar": "967D12M10D10M82D4M41D7M127DMD18M25D7M24D11M7D11M14D15M2D5M10D6M27D2M14D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M2D13M3D5M2DMDM6D2M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D58MD2M2D20MD9MDM22DMDMDM8D21M2D6MD27M2D6MD14MD5M6D9M10D2M8D5MDMD3M26D", "sequence": "MEDCRFETSELQASLMMSTPLFTDSWSSCNAANCDGSIKIQLIAGITYVAIPAVPMIQLGDLVGLPVAGDFLFPGLSSDEHLPMVDAAILNLFFQLKIKEVLELELVGRKLVVITGHSTGGAVAALTALWLLSQTSLPSFRVFCITFGSPLLGNQSLSTSISRSRLAHNFCHVVSIHDLIPRSSNEQFWPFGTFLFCSDNGGVCLDNADSVRRMFHILNATGTPNIEEHQRYGHYVFTLSHMFLKSRSFLGGNIPDNSYQACVALAVEALGFSNDDTSGVLVKECIETATRIVRAPILRSAALANDLASVLPARLEIQWYKDRCDASEEELGYYDFFKRYSLKRDFKVNMSRIRLAQFWDKVVEMVETNELPFDFHLGKKWVYASQFYQLLAEPLDIANFYKNRDIKSGGHYLDQGNRPKRYEVIDKWQKGVAKPEKCERSIYTSTTQDTCFWAKLEEVKECLDEVIKESSDAQRRSLLWEKIVRFERYANTLVKKKEVSKDVKAKNSSYSVWVENLREFKVKMGYVNEIEMVDESDAMETS", "taxon_id": 81972, "system_name": "arabidopsis_lyrata", "assembly": "v.1.0", "left_index": 78, "right_index": 79, "representative": { "id": "scaffold_502313.1", "score": -150 }, "domains": [ { "interpro": "IPR029058", "start": 109, "end": 234, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "AT3G52430", "score": -174.960519 } }, { "node_id": 6345365, "distance_to_parent": 0.047516, "node_type": "duplication", "bootstrap": 92, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 51, "right_index": 76, "children": [ { "node_id": 6345366, "distance_to_parent": 0.052267, "node_type": "speciation", "bootstrap": 5, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 66, "right_index": 75, "children": [ { "node_id": 633837, "distance_to_parent": 0.011729, "protein_stable_id": "Bra006922.1-P", "gene_stable_id": "Bra006922", "gene_description": "AT3G52430 (E=8e-195) PAD4, ATPAD4 | PAD4 (PHYTOALEXIN DEFICIENT 4); lipase/ protein binding / triacylglycerol lipase ", "cigar": "967D12M10D10M82D4M41D7M127DMD18M27D8M16D4MD6M12D15M10D22M10D6M25D4M14D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D58MD2M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M11D5M9D2M8D5MDMD2M27D", "sequence": "MEECRFETSELQASFMMSTPLWSNSWILCNAADSAGNIQIQHVAGIMYVALPKVEMNQPGSLVDVEVVGDGFFSALSSSLPSGEPPLMVNGAIRDLFVSSGRLIQTQITQGLEVEETKQVVITGHSTGGALAALTALWLLSQPSPPPFRLLCISFGSPLLGNQSLSSSVTRSRLAHKFCHVVSVHDHVPRGNDDRFWPFGTYLFCSDSGGLCLDNADSVRGMFRILNSTGTPNIEEHQRYGHYVSTLSHQFLISRTFRGGRISDNSYEAGVALAVESLGFSNDQPSGVSVKECIETATTISRAPILRSSELAIELGNVVPYRLEIQWYKDSCEASPKKLGYYDNFKNFSNQRELRVNMSRAKLAKFWDGVFEMVEKNELPFDFHLGKKWVYASQFYQLLAEPLDIAYFYKYTYSRTTGHYMKTGNRPKRYEVIDKWWKARGEPHKEKRARTRYASTTQDTCFWAKLEEAKECLDDLTCESSDAQKQTLLRKKIYEFERYSATLVKMKEVSKDVLATNSSYNVWVKKLSEFKSKMSNGVIDESDAMET", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 73, "right_index": 74, "representative": { "id": "Bra006922", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 89, "end": 242, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345367, "distance_to_parent": 0.034382, "node_type": "duplication", "bootstrap": 5, "duplication_confidence_score": 1, "node_taxon_id": 109376, "node_taxon": "Brassica oleracea var. oleracea", "left_index": 67, "right_index": 72, "children": [ { "node_id": 633799, "distance_to_parent": 0.09227, "protein_stable_id": "Bo8g080690.1", "gene_stable_id": "Bo8g080690", "cigar": "992D7M355D12M13D15M18D5M43D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M2D13M3D5M2DMDM6D2M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M16D5MD9MD12M3D3M2D2M5D5M3D58MD2M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9D3MD3M9D2M8D5MDMD2M27D", "sequence": "MKARSFWNRIGKKRAKKPDNVALRVNKIHITKGLELEETKQVVITGHSTGGALAALTALWLLSQPSPPPFRLLCITFGSPLLGNQSFSFSVSRSRLAYKFCHVVSIHDLVPRGNADRFWPFGTYLFCSDSGGLCLENADSVCGMFRILNSTGTPNIEEHQGYGYYVSTLSYQFLISRSFRGGRISDNSYEAGAAFAVESLGFSNDQEIGVLVKECIETATKKNRAPILRTSELPKHIEWYKHNCDVSPKQFGYYDNFRQFSNTREIRVNMSRAKLAKFWDGVFEMVEKNELPFDFYLAKKWVYTSKFYQLLFEPLDIAYFYKYKYSRTSGHYMKSGNRPKRYEVIDKWWKARGEPHKEKRARTRYASTTQDTCFWAKLEEAKECLDDLTCESSDAQKQTLLWKKIYEFERYSATLVKMKEVSKDVLAKNSSYTVWVEKLREFNKLKMSNGVVDESDAMET", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 70, "right_index": 71, "representative": { "id": "Bo8g080690", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 33, "end": 159, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633842, "distance_to_parent": 0.010491, "protein_stable_id": "Bo8g080720.1", "gene_stable_id": "Bo8g080720", "cigar": "1389D5M582D2M12D2M2D3MD11M2D13M3D5M2DMDM6D2M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D58MD2M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9D3MD3M9D2M8D5MDMD2M27D", "sequence": "MFRILNSTGTPNIEEHQRYGHYVSTLSHLFLISRSFRGGRISDNSYEAGVALAVESLGFSNDQPSGVSVKECIETATTISRAPILRSSELAIELGNVVPYRLEIQWYKDSCEASPKKLGYYDNFKNFSNQRELRVNMSRAKLAKFWDGVFEMVEMNELPFDFHLGKKWVYASQFYQLLAEPLDIAYFYKYTYSRATGHYMKSGNRPKRYEVIDKWWKARGEPHKEKRARTRYASTTQDTCFWAKLEEAKECLDDLTCESSDAQKQTLLWKKIYEFERYSATLVKMKEVSKDVLATNSSYTVWVEKLREFNKLKVSNGVVDKSDAMET", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 68, "right_index": 69, "representative": { "id": "Bo8g080720", "score": 0 }, "domains": [] } ], "representative": { "id": "Bo8g080720", "score": 0.010491 } } ], "representative": { "id": "Bra006922", "score": 0.011729 } }, { "node_id": 6345370, "distance_to_parent": 0.006945, "node_type": "duplication", "bootstrap": 92, "duplication_confidence_score": 1, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 52, "right_index": 65, "children": [ { "node_id": 6345375, "distance_to_parent": 0.062141, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 59, "right_index": 64, "children": [ { "node_id": 633846, "distance_to_parent": 0.011296, "protein_stable_id": "Bo4g125400.1", "gene_stable_id": "Bo4g125400", "cigar": "1413D4M43D2MD21M5DM4D17MD11MD11MD10M391D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M4D2M2D2M5D5M3D58MD2M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9DM2D4M9DM10D4MDMD2M27D", "sequence": "MEERKQVVITGHSTGGAVAALTALWLLSQPSKPLFRLLCITFGCPLLGNQSLSSSISRSRLAHNFCNVVSIHDLAPRRNDDLWPFGTFLFCSDIGCVCLDNADSVRKMFFILNSTGTPNIEERPRYEHYVSTLSHQFLVSRSFSGGSLSDNSYQAGVALAVESLGFSRDNPSGVSAKECIEAATEITRAPIVRSSELAIELGNVLPSRLEIQWFKDNCDGSPKQLGYYDNFKVMSKREMKVNVSRAKLAKFWDGVIRMLEKNELPSDFHLGKKWVYASQFYQLLAEPLDIAYFYKYDYSRTKGHYMENGNRPKRYVEIDKWWKEKGEPHKEKGARTRYASTTQDTCFWAKLEEAKECLDDMKSESIDEQRRYLLWKRIVGFESYAETLVKMKEVSVDVLARNSSYSVWVERLSEFKIKKGNMVADDAMEF", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 62, "right_index": 63, "representative": { "id": "Bo4g125400", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 4, "end": 93, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633769, "distance_to_parent": 0.008126, "protein_stable_id": "Bra033431.1-P", "gene_stable_id": "Bra033431", "gene_description": "AT3G52430 (E=3e-162) PAD4, ATPAD4 | PAD4 (PHYTOALEXIN DEFICIENT 4); lipase/ protein binding / triacylglycerol lipase ", "cigar": "1413D4M43D2MD21M5DM4D17MD11MD11MD10M391D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M4D2M2D2M5D5M3D58MD2M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9DM2D4M9DM10D4MDMD2M27D", "sequence": "MEERKQVVITGHSTGGSVAALTALWLLSQPSKPSFRLLCITFGSPLLGNQSLSSSISRSRLAHNFCNVVSIHDLAPRRNDDLWPFGTFLFCSDNGGVCLDNADSVRRMFFILNSTGTPNIEERPRYEHYVSTLSHQFLVSRSFSGGSLSDNSYQAGVALAVESLGFSRDNPSGVSAKECIEAATEITRAPIVRSSELAIELGNVLPSRLEIQWFKDSCDGSPKQLGYYDNFKVMSKREMKVNMSRAKLAKFWDGVIRMVEKKELPFDFHLGKKWVYASQFYQLLAEPLDIAYFYKYDYSRTKGHYMENGNRHKRYVEIDKWWKEKGEPHKEKGARTRNASTTQDTCFWAKLEEAKECLDDMKSESIDEQRRYLLWKRIVGFESYANTLVKMKEVSVDVLARNSSYSVWVERLSEFKIKNGNMVADDAMEF", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 60, "right_index": 61, "representative": { "id": "Bra033431", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 4, "end": 122, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra033431", "score": 0.008126 } }, { "node_id": 6345372, "distance_to_parent": 0.062009, "node_type": "speciation", "bootstrap": 100, "node_taxon_id": 3705, "node_taxon": "Brassica", "left_index": 53, "right_index": 58, "children": [ { "node_id": 633844, "distance_to_parent": 0.016252, "protein_stable_id": "Bo7g102600.1", "gene_stable_id": "Bo7g102600", "cigar": "967D12M10D10M82D4M41D7M127DMD18M21D14M16D4M19D15M10D22M10D6M25D4M14D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D61M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9D2MD4M9D2M8D5MDMD2M27D", "sequence": "MEECQFETSELLASLMMSTPLWSDSWSLCNLADSSKSIQIQRIAGTMYVALPEVEMNQPGNLVDLKVDGNELFSAFSTSSTSDEPPPMVNGAILDLFVSSALFIESQITIGLEKEDREQVVITGYSTGGAVAALTALWLLSVPLSPSYPLLCITFGSPLLGNQSLSSSISQSHVAQNFCHVVSIHDLVPRRNDEPLWPFGTYLFCSDNGGVCLDNAASVRRMFHILNSTGTPNIEERQRYEHYVSTLSHQFLISRSFHSGDISDNSYEAGVALAVESLGFSVDHPSGVSAKECIETATRMSRARIERASELAIELGDVLPSRLDIQWYKDSCDASPKKLGYYDNFKLYSNQRELRVNMSRAKLAKFWDRVYDMVETNELPPDFDFELKWLFASQFYQLLAEPLDIAYFYKYKYSKTGNGHYMENGNRPKRYLLFDKWWKEKGECHRVKTARTRYASTTQDTCFWAKVEEAKEWLDDVRSEGTNEQRRALLWEKIVGFEIYADTLVKMKDVSLDVLAENSSHRVWKKKLTEFKKDNGIGMVADESDAMET", "taxon_id": 109376, "system_name": "brassica_oleracea", "assembly": "v2.1", "left_index": 56, "right_index": 57, "representative": { "id": "Bo7g102600", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 80, "end": 236, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633784, "distance_to_parent": 0.008683, "protein_stable_id": "Bra012805.1-P", "gene_stable_id": "Bra012805", "gene_description": "AT3G52430 (E=4e-189) PAD4, ATPAD4 | PAD4 (PHYTOALEXIN DEFICIENT 4); lipase/ protein binding / triacylglycerol lipase ", "cigar": "886D93M10D10M82D4M41D7M127DMD18M21D14M16D4M19D15M10D22M10D6M25D4M14D2MD21M5DM4D17MD11MD11MD11M390D17M3D2MD18M12D2M2D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD9MD12M3D3M2D2M5D5M3D61M2D20MD9MDM19D2MDMDMDM8D21M2D6MD27M2D6MD14MD5M9D2MD4M9D2M8D5MDMD2M27D", "sequence": "MGKASGAKHATVVVAALAFGWLAIEIAFKPFLDKLRSSIDKSNPAKDPDDSDKDAAFAAAAAASETTSSVPSLTTQTTQVVMEECQFETSELQASLMMSTPLWSDSWSLCNVADSSKSIQIQRIAGTMYVALPEVEINQPGNLVDLKVAGNELFSAFSTSSTSDEPPPMVNGAILELFVSSALFIESQITRGLEKEDREQVVITGYSTGGTVAALTALWLLSVPLSPSYPLLCITFGSPLLGNQSLSSSISRSHVAQNFCHVVSIHDLVPRRNDEQLWPFGTYLFCSDNGGLCLDNAASVRRMFHILNSTGTPNIEERQRYEHYVSTLSRQFLISRSSLSENISDNSYDAGVALAVESLGFSDDHPSGVSAKECIETATRISRAPIERASELAIELGDVLPSRLEIQWYKDSCEASPKKLGYYDNFKLYSNPRELKVNMSRAKLAKFWDRVYDMVETNELPPDFDFELKWLFASQFYQLLAEPLDIAYFYKYKYSRTGTGHYMENGNRPKRYLLFDKWWKERGECHRVKTARTRYASTTQDTCFWAKVEEAKEWLDDVRSEGTNEQRRASLWEKIVGFEIYANTLVKMKDVSLDVLAENSSYRVWEKKLTEFKKDNGIGMVADESDAMET", "taxon_id": 51351, "system_name": "brassica_rapa", "assembly": "IVFCAASv1", "left_index": 54, "right_index": 55, "representative": { "id": "Bra012805", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 161, "end": 290, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "Bra012805", "score": 0.008683 } } ], "representative": { "id": "Bra033431", "score": 0.070267 } } ], "representative": { "id": "Bra006922", "score": 0.063996 } } ], "representative": { "id": "AT3G52430", "score": -174.897542 } }, { "node_id": 6345377, "distance_to_parent": 0.031918, "node_type": "speciation", "bootstrap": 1, "node_taxon_id": 71275, "node_taxon": "rosids", "left_index": 8, "right_index": 49, "children": [ { "node_id": 6345393, "distance_to_parent": 0.18592, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3641, "node_taxon": "Theobroma cacao", "left_index": 43, "right_index": 48, "children": [ { "node_id": 633729, "distance_to_parent": 0.048937, "protein_stable_id": "EOX92653", "gene_stable_id": "TCM_001569", "gene_description": "PAD4, putative", "cigar": "970D9M14D6M82D4M41D7M126D21M30D5M16D4MD14M4D12M13D15M6DM10D6M25D7M5DM5D2MD21M6D21MD11MD11MD18M13D26M5D20M2D2M308D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD14M5D15M17D14M4DM2DM3DM19D11M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M72D", "sequence": "MSEMLATFLASTPLLEEAWRLCSIADTTFPGAYLVQQIGSVAYVAFSGRQADPGSDQSRENPARLDAEDGGLFAPLYREAEKPIRVHSGMLRLFLSMYQSLQIQFASLIGKVKSVVITGHSIGGTTASLSALWLLCYLQSMSSPITSVLCITFGSPLLGNEALHRSILRERWGGNFCHVVSKHDIMPRLLFADVVPNHISKIHALISFSHHCMAAPHLVVASLSSQLVDDVEDIFHCVLKDLELLAQAEEPSENVFWPFGSYVFCCQEGAICLDYAASVMKMMYLMLATGSPSCSIEDHLKYGDYVGKVSKHFLRARNFHEEDLPDSSYEAGVALALQSTELVIKEPVEDLCLSVQNSNLTKEVAIRAKDCLQMARDGNKPTVIAANLATKLSKIVPFRIEIEWYKFYCDEADDQMGYYDSFKLKARWKRESRINMNRYRLAVFWNSVIDMLENKKLPHDFHRRGKWVNASQFYKLLVEPLDIADYYRAGKHRERGHYITHGRERRYEFFDKWWRDRGIPEEENKRSKFANFTQDSCFWAKVEEAREWLDNVRSESDVKKRDLLWRKIDLFEQYARKLIENKEISEDVLAKNSSFSRWMEDWKELKS", "taxon_id": 3641, "system_name": "theobroma_cacao", "assembly": "GCA_000403535.1", "left_index": 46, "right_index": 47, "representative": { "id": "TCM_001569", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 83, "end": 208, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633788, "distance_to_parent": 0.01893, "protein_stable_id": "EOX92655", "gene_stable_id": "TCM_001572", "gene_description": "PAD4, putative isoform 2", "cigar": "962D17M10D10M82D4M41D7M126D21M30D5M16D4MD14M4D14M11D15M6DM10D6M25D7M5DM5D2MD21M6D21MD11MD11MD18M13D25M7D19M2D2M308D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD14M5D15M17D14M4DM2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M4D7MD4M9D2M8D5MDM30D", "sequence": "MGTETSCENKFEMSETLATFLASTPLLEEAWRLCSIADTTFPGAYLVQQIGSVAYVAFSGRQPDSGSDQSCENPARLDAEDGGLFAPLYRHSEAEEPIKLHSGMLRLFLSMHQSLQIQIASLIGKVKSVVITGHSIGGTTASLSALWLLCQLQSMSFPIISVLCITFGSPLLGNEALHRSILRERWGGNFCHVVSKHDIMPRLLFADIVPNNISKIHTLINFWHHCMAAPHLTSLSSQLADEVKDIFHCVLKDLELLAQAEEPSDNVFWPFGSYVFCCQEGAICLDNVASVIKMMYLMLATGSPSCSIEDHLKYGDYVGKVSKHFLRARNFHEEDLPDSSYEAGVALALQSTELVIKEPVQDLYLSEQNSNLRKEVVIMAKDCLQMAQDGNKPNLTAANLAIKLSKIVPFRAEIEWYKACCDDADDQMGYYDAFKLKGRSKREYRVNMNRHKLAGFWNSVIHMLENNKLPQDFHRRGKWVNASQFYKLLVEPLDIADYYRAGKHRERGHYIKHGRERRYEIFDKWWRDRSVPEEENKRSKFASSTQDSCFWAKVEEAREWLDNVRSESDVKKRDLLWHNIDLFEQYSRKLIENKEVSIDVLAKNSSFSRWMEDWKELKSQVQQFPPRFPGFVDGEVVP", "taxon_id": 3641, "system_name": "theobroma_cacao", "assembly": "GCA_000403535.1", "left_index": 44, "right_index": 45, "representative": { "id": "TCM_001572", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 96, "end": 209, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "TCM_001572", "score": 0.01893 } }, { "node_id": 6345378, "distance_to_parent": 0.021055, "node_type": "speciation", "bootstrap": 0, "node_taxon_id": 91835, "node_taxon": "fabids", "left_index": 9, "right_index": 42, "children": [ { "node_id": 6345379, "distance_to_parent": 0.108489, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3694, "node_taxon": "Populus trichocarpa", "left_index": 36, "right_index": 41, "children": [ { "node_id": 633752, "distance_to_parent": 0.064729, "protein_stable_id": "POPTR_0007s04670.1", "gene_stable_id": "POPTR_0007s04670", "cigar": "1127D5M248D7M73D2MD21M7D20MD11MD11MD18M14D24M6D21MD2M308D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD5M2DMD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M4D7MD4M9D2M8D5MDM30D", "sequence": "MCMQMSTLMQTSQSIIFTGHSIGGTAASLAALWLLSYLQSNSPNLSVLCITFGSPLLGNETLSRAILRERWGGKFCHVVSKYDLMPRILFAPLDPIAPLIKPLLQFWHLYMTSPHLGLLAVQRNDEYEAEIFQFVLVHLGRLVEAGEEAVTGVFRPFGNYFFCSEDGAICVDNVESVIKMMYLLLATGSPSYSIEDHLKYGDYVERISSQFLERKSSMEGELPESSYEAGVVLALQSSGIASQEPVAGRAKDCLKAARRMGRTPNLNCANLAIKLSRINPYRAEIEWYKALCDRSDDQMGYYDSFKRRGASKRDFKVNLNRHKLAQFWDNVIDLMESNQLPHDFHKHGKWVYSSQSYKLLVEPLDIAEYYRTGMHHSKGHYINHGRERRYQIFDRWWKNVRVEENKRSKFASLTQDTCFWAKVEEARGLLDDVGNTRDPSHSAFLWKNMDGFANYAKALVEAKEVSIDVVAKNSSYSLWLKDYNELKSQREQFRPQFSGFMNREIVP", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 39, "right_index": 40, "representative": { "id": "POPTR_0007s04670", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 6, "end": 94, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633836, "distance_to_parent": 0.057191, "protein_stable_id": "POPTR_0005s06960.1", "gene_stable_id": "POPTR_0005s06960", "gene_display_label": "POPTRDRAFT_558462", "gene_description": "PAD4 [Source:UniProtKB/TrEMBL;Acc:B9H4M3]", "cigar": "1383D4M73D2MD21M7D20MD11MD11MD18M14D24M6D24M308D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20DMDMDMDM8D21M2D6M2D26M2D6MD14MD5M4D7MD4M9D2M8D5MDM30D", "sequence": "MQTSKSIIFTGHSVGGATASLAALWLLSYLQSNFLNLSVLCITFGSPLLGNETLSRAILREKWGGKFCHVVSKYDIMPRMLFVPMDPIAPLLKPLLHFWHMYMNSPHFGLLAVPLSDDSMTQIFQHVLFHLGRLVEAGEEAVTGGMLRPFGNYFFCSEDGAICVDNAASVVKMMYLLFATGLPSSSIGDHLKYGDYVGKISLQFLEKRSFMQGELPESSYEAGVVLALQSTGISCKEQIAGPAKDCLKAARRLGRTPNLNCANLAIKLSKINPYRAEIEWYKALCDRSDDQMGYYDSFKQRGASKRDFKVNLNRHKLAQFWDNVINLFESNQLPHDFHRQGKWVNASQFYKLLVEPLDIAEYYRTGMHRSKGHYIEHGRERRYRIFDRWWKERSVRGENYKRSKFASLTQDTCFWARVEEARDLLDALRSTSDPSHLALLWQKIDSFASDANALVETKEVSIDVVAKNSTYSLWLKDYNELKSQKVQFRPLFLSFVNEEMVP", "taxon_id": 3694, "system_name": "populus_trichocarpa", "assembly": "JGI2.0", "left_index": 37, "right_index": 38, "representative": { "id": "POPTR_0005s06960", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 4, "end": 86, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "POPTR_0005s06960", "score": -99.942809 } }, { "node_id": 6345382, "distance_to_parent": 0.02122, "node_type": "speciation", "bootstrap": 3, "node_taxon_id": 91835, "node_taxon": "fabids", "left_index": 10, "right_index": 35, "children": [ { "node_id": 633774, "distance_to_parent": 0.156066, "protein_stable_id": "EMJ14293", "gene_stable_id": "PRUPE_ppa025554mg", "gene_display_label": "PAD4", "gene_description": "alpha/beta-Hydrolases superfamily protein [Source:Projected from Arabidopsis thaliana (AT3G52430) TAIR;Acc:AT3G52430]", "cigar": "1131DM248D7M73D2MD21M7D20MD11MD11MD18M13D22M10D22M309D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M20D3MDMDM8D21M2D6M2D26M2D6MD14MD13MD2MD4M9D2M8D5MD14M17D", "sequence": "MVEVTKNSKSIVITGHSIGGTTASLCALWLLSYLQSVSSSHSVLCITFGSPLLGNESLSRAILRERWGGNFCHVVSKYDIMPRLLFAPLASCTTQLHLLMQHWTAPQFGNLGVQLGDEANLAELFLFVAAHLQVASEAGEERATSSYCPFGNYLFCSQEGALCVDNAASVIKMMYLTFIAGNPSCCIEDHLKYGEYVGKFCSQFLNKRSFMQGELPQSSWDAGVALALQSLGISGQESASEPAKECLKIARRLGRTPNLKCADLAVRLSRITPYRAEIEWYKGSCDKSDEKLGYYDAFKQRGTSKRGHKVNMNRHKLAAFWNGVIEMLDKNELPHDFHRRAKWVNASQFYILLVEPLEIAEYYRSNMHLVKGHYLKHGRERRFEIFDRWWREKRVNEEKNSKRIKFAGLTQDSCFWAKVEEARECVAHARSESDASKQALLWDSINKFEMYAARLVERKEVSEDVVAKNSSYQKLLEELTELRSAATNGGLLADSKFGMQRMDIDARKQNARSRIEGKL", "taxon_id": 3760, "system_name": "prunus_persica", "assembly": "GCA_000346465.1", "left_index": 33, "right_index": 34, "representative": { "id": "PRUPE_ppa025554mg", "score": -50 }, "domains": [ { "interpro": "IPR029058", "start": 8, "end": 90, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 6345383, "distance_to_parent": 0.119305, "node_type": "speciation", "bootstrap": 47, "node_taxon_id": 3814, "node_taxon": "Papilionoideae", "left_index": 11, "right_index": 32, "children": [ { "node_id": 6345390, "distance_to_parent": 0.149557, "node_type": "duplication", "bootstrap": 47, "duplication_confidence_score": 1, "node_taxon_id": 3880, "node_taxon": "Medicago truncatula", "left_index": 26, "right_index": 31, "children": [ { "node_id": 633815, "distance_to_parent": 0.45968, "protein_stable_id": "KEH16772", "gene_stable_id": "MTR_0095s0020", "gene_description": "lipase-like protein", "cigar": "967D12M102D4M41D7M110D8M2D27M16D19M16D36M12D22M10D6M25D7M5D8MD21M7D20MD11MD11MD18M14D24M6D26M306D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10M2D27M2DM6D5M3D61M2D20MD8MD2M18D3MD3MDM9D56M2D19M20D4M9D2M8D5MD3M28D", "sequence": "MGLQAGEGGRRGRGGWEETIRRNKDRSGMEQRGRIDENGEYRGGSREGVEGREVVKERREEEQMGEREGRGNQWERGAVGGRERSMGWETREKGRGVDGETWVGSRREMGAEGEGQVERSGVKCRRSKWERGGGEGSSEERQGSKSGKQEGEDAKSLVITGHSIGGAIASLCTLWLLSYINSISSSLPVMCITFGSPLLGNKSFSQAISREKWGGNFCHVVSKHDIMPRFLFAPITPHTSQLNFLLQFWHFSMTSPEFGKLAAQVSEKEKAELFTAVLDSLETATQNGEAAEASVPILFHPFGNYLFVSEEGALCVDSPHTIIKMMHLMLSTGSPTSSIEEHLKYGELVNRLSLEMLNKKNIMLGNIPNSSYEAGLELAIQSSGLANQESAVIPAKECLKSARRIGLSPALKAANLPLSLAKVVPFTAPIQWLKVCVISQHDHMGYYDTFQHNMICPPPRLTLPHPSQPLLLFRPPFLHLFQHTSSPFPFPIQLPSLASSSLIPSSSSSSNFPPSPSSSPLPPSLLPLLSLPSTSSPLPYISHFLLPFLFLPTSSPIPPPHSLTSPSPSPLLFPISPLHSPLTLTSTSLPSSPSTPPSPLPSPLLLTLCSPLSATPPHTSLSPSIVLSPLPLRSLSPPSLDPPLSLHRFHFS", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 29, "right_index": 30, "representative": { "id": "MTR_0095s0020", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 154, "end": 236, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633816, "distance_to_parent": 0, "protein_stable_id": "KEH20911", "gene_stable_id": "MTR_8g494200", "gene_description": "phytoalexin deficient protein", "cigar": "964D15M10D10M82D4M41D7M124D23M25D10M16D4MD11M7D13M12D15M6DM10D6M28D4M5D8MD21M7D20MD11MD11MD18M14D24M6D26M306D24M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D2M5D5M3D58MD2M2D6MD13MD8MD2M18D3MDMDMDM8D21M2D6M2D26M2D6MD14MD5MD10MD4M9D2M8D5MDM30D", "sequence": "MAANETSPFESSEMLARFLISTPLLPESWRLCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSDPSWRTLEPLESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVLGILENTDAKSLVITGHSIGGAIASLCTLWLLSYINSISSSLPVMCITFGSPLLGNKSFSQAISREKWGGNFCHVVSKHDIMPRFLFAPITPHTSQLNFLLQFWHFSMTSPEFGKLAAQVSEKEKAELFTAVLDSLETATQNGEAAEASVPILFHPFGNYLFVSEEGALCVDSPHTIIKMMHLMLSTGSPTSSIEEHLKYGELVNRLSLEMLNKKNIMLGNIPNSSYEAGLELAIQSSGLANQESAVIPAKECLKSARRIGLSPALKAANLPLSLAKVVPFRAQIELYKSRCDKQDDQMGYYDTFKTRGSAKVHMEVNKIRYKLARFWDSVIDMFEKNELPHDFDQRAKWVCASQFYKLLAEPLDIADYYKQGKHMEKGHYIEHGRARRYEIFDRWWKNREVTTGEENKERSTFASSTQDSCFWAKVEEARDWLNGMRSESDSNKLDTLWGKIENFEQYAIELIQNKEVSIDVLARNSSYSTWVEDLKEFRQLRANVQRFPQQFGRFLDGEVVP", "taxon_id": 3880, "system_name": "medicago_truncatula", "assembly": "GCA_000219495.2", "left_index": 27, "right_index": 28, "representative": { "id": "MTR_8g494200", "score": -100 }, "domains": [ { "interpro": "IPR029058", "start": 35, "end": 211, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "MTR_8g494200", "score": -100 } }, { "node_id": 6345384, "distance_to_parent": 0.010158, "node_type": "duplication", "bootstrap": 78, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 12, "right_index": 25, "children": [ { "node_id": 6345389, "distance_to_parent": 0.104291, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 19, "right_index": 24, "children": [ { "node_id": 633747, "distance_to_parent": 0.024768, "protein_stable_id": "GLYMA04G38691.1", "gene_stable_id": "GLYMA04G38691", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7KLE8]", "cigar": "964D15M10D10M82D4M41D7M124D23M26D9M16D4MD11M7D14M11D15M6DM10D6M25D7M5D3M3D2MD21M5D22MD11MD11MD18M14D24M7D24M309D22M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D3M4D5M3D58MD2M2D6MD13MD8MDM18D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MD10MD4M9D2M8D5MDM30D", "sequence": "MVADEASPFETSDMLATLLASTPLLSESWRLCTTVAATAPRSFMTEQHGGGGVVYVAFPGVEMAAGSDSICRNLVALESIGDVPLFSARRRNKEGDEPVMVHAGMLNLLSTFFEPFQKQMLALMGNSKTKSIVLTGHSIGGATASLCALWLLSYLHQTYSSISVSVLCITFGSPMLGNGSFSRAILRERWGGNFCHVVSKHDIMPRLLFAPITPYTAQINFLLQFWQLSMTAPGFGKLAVPISDQQKELFNFVMSHLDAATQDEEGSAPVLFHPFGSYLFVSSDGAVCVDCATSVIKMLHLMFASVSPACSIEDHLKYGDYVKNLSLQFLNQNNSVQGNIPDSSYEAGLELSVQSSGLGNQESAIEPAKECLKMTRRMGPSPTKNAANLSITLSKFVPYRTEIEWYKAWCHQQVDQMGYYDLFKRRRSTSKMAMKVNMNRHKLARFWNNVIEMWERNELPHDVAVRAKWVNASHFYKLLVEPLDIAEYYGKGMHTTKGHYIQHGREKRYEIFDRWWKDAMGNTEENNERRSKFASLTQDSCFWARVEEARDWLNSVRSESDTTKLAVLWDNIEKFEKYAMELIDNKEVSEDVLAKNSSYSIWMEDLRGLRELKAKVKTFSHHFNPFLDGEVIP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 22, "right_index": 23, "representative": { "id": "GLYMA04G38691", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 45, "end": 213, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633766, "distance_to_parent": 0.020551, "protein_stable_id": "GLYMA06G16291.1", "gene_stable_id": "GLYMA06G16291", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7KV97]", "cigar": "964D15M10D10M82D4M41D7M125D22M25D10M16D4MD11M7D14M11D15M6DM10D6M25D7M5D3M3D2MD21M5D22MD11MD11MD18M14D24M7D24M309D22M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD11M2D4M2D3M4D5M3D58MD2M2D6MD13MD8MDM18D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MD10MD4M9D2M8D5MDM30D", "sequence": "MVADEASPFETSEMLATFLTSTPLLSESWQLCTTAAAAAPRSFVTEQRGGGVVYVAFPGVEMVAASTDSSWRNFVALDSIGDMPLFSARRLNKEGDEPVMVHAGMLNLFSIFFEPFQKQMLAIMGDTNTKFIVITGHSIGGATASLCALWLLSYLHQISSFMSVSVLCITFGSPMLGNGSFSRAILRERWGGNFCHVVSKHDIMPRLLFAPITSYTTQLNFLLQFWQLSMTDPGFGKLAISISDQQKELFDFVMSHLDAATHYGEGSAHVWFHPFGSYLFVSSEGAVCVDGANAVIKMMHLMFASGSLACSIEDHLKYGEYVKNLSLQFLNQNNSMQGSIHDSSYEAGLELAVQSSGLASQESEIEPAKECLKMTRRMGPSPTKNAANLAITLSKFVPYRAEIEWYKAWCDQQVDQMGYYDLFKRRRSTSRMTMKVNMNRHKLARFWNNVIEKLETNELPHDLAVRAKWVNASHFYKLLVEPLDIAEYYGKGMHTTKGHYIQHGRERRYEIFDRWWKDGMANTEENNERRSKFASLTQDSCFWARVEEAREWLDSVRSESDTTKLAVLWDNIEKFEKYAMELVDNKEVSEDVLAKNSSYSIWLEDLRGLRELKAKVKRFSHHFNPFLDGEVIP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 20, "right_index": 21, "representative": { "id": "GLYMA06G16291", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 41, "end": 213, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GLYMA06G16291", "score": 0.020551 } }, { "node_id": 6345386, "distance_to_parent": 0.065433, "node_type": "duplication", "bootstrap": 100, "duplication_confidence_score": 1, "node_taxon_id": 3847, "node_taxon": "Glycine max", "left_index": 13, "right_index": 18, "children": [ { "node_id": 633808, "distance_to_parent": 0.050079, "protein_stable_id": "GLYMA05G32756.1", "gene_stable_id": "GLYMA05G32756", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7KR78]", "cigar": "946D33M10D10M82D4M41D7M126D21M25D10M16D4MD10M8D13M12D15M6DM10D6M25D7M5D3M3D2MD21M7D20MD11MD11MD18M14D24M6D25M309D22M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD17M2D2M5D5M3D43M20D2M72D3M2D9M17D5M49D5MD4M9D2M8D5MDM30D", "sequence": "NSKPRNFRGKVEAIELSRIESIRGGRFESREMLATFVSSTPLLSESWRLCSQANATPFRTFVTERVGAAVYVAFSGVHMAGESDPNWRSLIPLDSIGGVPLFSSRRSKEGEEPVMVHAGMLNLFFSLFNSFQNQMLEIVGSKDTKSVVITGHSIGGATASLCTLWLLSYLQSISSSVSVLCITYGAPLLGNESFSQIIFKERWGGNFCHVVSKHDIMPRLLFAPITSLSTQLNSLLQFWHLSMTSPDMGKLANQISEKEKDKLFTAVVDYLETATQDGETSVPILFHPFGSYFFVSEEGAVCVDSSAAIIKMMHLTLATSSPASSIEDHLKYGDYVNKMSAQTLYQSNSMQKSIPDSSYEAGLELAIQSSGIANQESAITSAKECLKTTRRMGPSPTLNAASLALSLSKVVPYRAQIEWYKTWCEKQDDQMGYYDSFKSRNSSSSKRGMKVNINRCKLARFWNNVIDMLERGELPHDFDKRAKWVYTSHFYKLLNSSYSIWVEDLRELKQLKAKVQRFPHQFTGFLDGEVVP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 16, "right_index": 17, "representative": { "id": "GLYMA05G32756", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 109, "end": 226, "name": "AB_hydrolase", "id": 29058 } ] }, { "node_id": 633802, "distance_to_parent": 0.014246, "protein_stable_id": "GLYMA08G00420.2", "gene_stable_id": "GLYMA08G00420", "gene_description": "Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:K7L476]", "cigar": "962D17M10D10M82D4M41D7M126D21M25D10M16D4MD10M8D13M12D15M6DM10D6M25D7M5D3M3D2MD21M7D20MD11MD11MD18M14D24M6D25M309D22M3D2MD22M12D3MD11M8D15M2DMDM3D5M2D2M6D7MD8M16D5M22D14M3D2M2DM3DM11D2M3D2MD2M4D5M2D10MD10MD17M2D2M5D5M3D58MD2M2D6MD13MD8MD2M17D4MDMDMDM8D21M2D6M2D26M2D6MD14MD5MD10MD4M9D2M8D5MDM30D", "sequence": "MRMASNETSPFESREMLASFVSSTPLLSDSWRLCTQANATPFLTFVTERVGASVYVAFSGVHMAGESDPNWRNLTPLYSIGGLPLFSSRRSKEWEEPVMVHAGILNLFFSLFNSFQNQMLEIVGNKDTKSVVITGHSIGGATASLCTLWLLSYLQSISSSVSILCITYGAPLIGNESFSQTIFKERWGGNFCHVVSKHDIMPRLLFAPITSLSTQLNSLLQFWHLSMTSPDFGKLANQISEKEKDKLFTAVMDYLEAATQDGEKSAPILFHPFGSYFFVSEEGAVCVDSPSAIIKMMHLMLATSSPASSIEDHLKYGDYVNKMSAQTLYQSNSMQKNIPDSSYEAGLELAIQSSGIANQEPAITSAKECLKTTRRMGPSPTLNAASLAVSLSKVVPYRAQIEWYKTWCDEQDDQMGYYDSFKSRDSSSSKRDMKININRCKLARFWNNVIDMLERGELPHDFDKRAKWVNTSHFYKLLVEPLDIAEYYGKGMHRTKGHYMQHGRERRYEIFDRWWKDKTVTTGREENKERSKFASLTQDSCFWARVEEARDWLNCVRSERDTNKLALLWDKIENFEKYAIDLIENKEVSGDVLFKNSSYSIWVEDLRELKQLKAKVQRFPRQFTGFLDGEVVP", "taxon_id": 3847, "system_name": "glycine_max", "assembly": "V1.0", "left_index": 14, "right_index": 15, "representative": { "id": "GLYMA08G00420", "score": 0 }, "domains": [ { "interpro": "IPR029058", "start": 91, "end": 210, "name": "AB_hydrolase", "id": 29058 } ] } ], "representative": { "id": "GLYMA08G00420", "score": 0.014246 } } ], "representative": { "id": "GLYMA08G00420", "score": 0.079679 } } ], "representative": { "id": "MTR_8g494200", "score": -99.850443 } } ], "representative": { "id": "MTR_8g494200", "score": -99.731138 } } ], "representative": { "id": "POPTR_0005s06960", "score": -99.83431999999999 } } ], "representative": { "id": "POPTR_0005s06960", "score": -99.81326499999999 } } ], "representative": { "id": "AT3G52430", "score": -174.551799 } } ], "representative": { "id": "AT3G52430", "score": -174.538928 } } ], "representative": { "id": "AT3G52430", "score": -174.51973 } } ], "representative": { "id": "AT3G52430", "score": -174.413127 } } ], "representative": { "id": "AT3G52430", "score": -174.172659 } } ], "representative": { "id": "AT3G52430", "score": -174.142995 } } ], "stable_ids": [ "EPlGT00140000001539" ], "representative": { "id": "AT3G52430", "score": -174.142995 } } ] } } }