{
  "_id": "Zm00001d018033",
  "name": "Zm00001d018033",
  "description": "Zm00001d018033",
  "biotype": "protein_coding",
  "taxon_id": 4577000,
  "system_name": "zea_mays",
  "db_type": "core",
  "gene_idx": 25948,
  "location": {
    "region": "5",
    "start": 212494773,
    "end": 212500400,
    "strand": -1,
    "map": "GCA_000005015.6"
  },
  "xrefs": [
    {
      "db": "UniParc",
      "ids": [
        "UPI0008426559"
      ]
    },
    {
      "db": "Uniprot/SPTREMBL",
      "ids": [
        "A0A1D6HKA3"
      ]
    },
    {
      "db": "protein_id",
      "ids": [
        "AQK74861.1"
      ]
    },
    {
      "db": "KEGG_Enzyme",
      "ids": [
        "00500+2.4.1.21"
      ]
    },
    {
      "db": "MaizeGDB",
      "ids": [
        "Zm00001d018033"
      ]
    }
  ],
  "gene_structure": {
    "exons": [
      {
        "id": "Zm00001d018033_T001.exon1",
        "start": 1,
        "end": 228
      },
      {
        "id": "Zm00001d018033_T001.exon2",
        "start": 706,
        "end": 1114
      },
      {
        "id": "Zm00001d018033_T001.exon3",
        "start": 1182,
        "end": 1246
      },
      {
        "id": "Zm00001d018033_T001.exon4",
        "start": 1513,
        "end": 1590
      },
      {
        "id": "Zm00001d018033_T001.exon5",
        "start": 1683,
        "end": 1793
      },
      {
        "id": "Zm00001d018033_T001.exon6",
        "start": 1898,
        "end": 1942
      },
      {
        "id": "Zm00001d018033_T001.exon7",
        "start": 2281,
        "end": 2454
      },
      {
        "id": "Zm00001d018033_T001.exon8",
        "start": 3383,
        "end": 5628
      }
    ],
    "transcripts": [
      {
        "exons": [
          "Zm00001d018033_T001.exon1",
          "Zm00001d018033_T001.exon2",
          "Zm00001d018033_T001.exon3",
          "Zm00001d018033_T001.exon4",
          "Zm00001d018033_T001.exon5",
          "Zm00001d018033_T001.exon6",
          "Zm00001d018033_T001.exon7",
          "Zm00001d018033_T001.exon8"
        ],
        "length": 3356,
        "exon_junctions": [
          228,
          637,
          702,
          780,
          891,
          936,
          1110
        ],
        "cds": {
          "start": 1,
          "end": 2067
        },
        "translation": {
          "id": "Zm00001d018033_P001",
          "length": 688,
          "features": {
            "family": {
              "entries": [
                {
                  "name": "MF_00484",
                  "description": "Glycogen_synth",
                  "db": "HAMAP",
                  "interpro": "IPR011835",
                  "start": 197,
                  "end": 684
                },
                {
                  "name": "TIGR02095",
                  "description": "TIGR02095",
                  "db": "TIGRfam",
                  "interpro": "IPR011835",
                  "start": 197,
                  "end": 682
                }
              ]
            },
            "domain": {
              "entries": [
                {
                  "name": "PF08323",
                  "description": "Glyco_transf_5",
                  "db": "Pfam",
                  "interpro": "IPR013534",
                  "start": 198,
                  "end": 440
                }
              ],
              "architecture": [
                {
                  "root": "13534",
                  "start": 198,
                  "end": 440,
                  "interpro": "IPR013534",
                  "name": "Starch_synth_cat_dom",
                  "description": "Starch synthase, catalytic domain"
                }
              ],
              "roots": "13534"
            }
          }
        },
        "id": "Zm00001d018033_T001"
      }
    ],
    "canonical_transcript": "Zm00001d018033_T001"
  },
  "annotations": {
    "domains": {
      "entries": [
        {
          "id": "IPR011835",
          "name": "GS/SS",
          "description": "Bacterial/plant glycogen synthase"
        },
        {
          "id": "IPR013534",
          "name": "Starch_synth_cat_dom",
          "description": "Starch synthase, catalytic domain"
        }
      ]
    },
    "GO": {
      "entries": [
        {
          "id": "GO:0004373",
          "name": "glycogen (starch) synthase activity",
          "namespace": "molecular_function",
          "def": "Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1).",
          "subset": [
            "gosubset_prok"
          ],
          "evidence_code": "IEA"
        }
      ],
      "ancestors": [
        3674,
        3824,
        8194,
        16740,
        16757,
        16758,
        35251,
        46527
      ]
    },
    "taxonomy": {
      "entries": [
        {
          "_id": 4577000,
          "name": "Zea mays"
        }
      ],
      "ancestors": [
        1,
        2759,
        3193,
        3398,
        4447,
        4479,
        4575,
        4577,
        4734,
        33090,
        35493,
        38820,
        58023,
        58024,
        78536,
        131221,
        131567,
        147369,
        147370,
        147429,
        1437183,
        1437197,
        1648029,
        1648033
      ]
    }
  },
  "synonyms": [
    "GRMZM2G105791"
  ],
  "homology": {
    "gene_tree": {
      "id": 129786,
      "root_taxon_id": 3398,
      "root_taxon_name": "Mesangiospermae",
      "representative": {
        "closest": {
          "id": "Zm00004b015091",
          "taxon_id": 4577,
          "description": "W221_015091"
        },
        "model": {
          "id": "AT3G01180",
          "taxon_id": 3702,
          "name": "SS2",
          "description": "Starch synthase 2, chloroplastic/amyloplastic"
        }
      }
    },
    "homologous_genes": {
      "ortholog_one2one": [
        "Zm00008a022973",
        "Zm00004b015091",
        "TIL1100028279"
      ],
      "ortholog_one2many": [
        "SORBI_004G238600",
        "Si016492m.g",
        "OS02G0744700",
        "BRADI3G59440",
        "VIT_14s0108g00940",
        "AT3G01180"
      ],
      "within_species_paralog": [
        "Zm00001d037234",
        "Zm00001d014150",
        "Zm00001d045261",
        "Zm00001d045462",
        "Zm00001d019479",
        "Zm00001d000002",
        "Zm00001d010821",
        "Zm00001d052263",
        "Zm00001d002256",
        "Zm00001d027242",
        "Zm00001d029360",
        "Zm00001d033690",
        "Zm00001d033937",
        "Zm00001d026337"
      ],
      "ortholog_many2many": [
        "GLYMA13G05441",
        "GLYMA18G49480",
        "GLYMA19G02690"
      ]
    }
  },
  "bins": {
    "fixed_100": 756,
    "fixed_200": 1516,
    "fixed_500": 3792,
    "fixed_1000": 7589,
    "uniform_1Mb": 4498,
    "uniform_2Mb": 2274,
    "uniform_5Mb": 939,
    "uniform_10Mb": 495
  },
  "species_idx": 4577000
}