{ "version": 3, "sources": ["../../src/engine.ts", "../../src/adapter-factory.ts", "../../src/config.ts", "../../src/logger.ts", "../../src/package-resolver.ts", "../../src/index.ts"], "sourcesContent": ["import { loadDefinitionPackages } from 'fhir-definition';\r\nimport { createRuntime, extractSearchValues, extractAllSearchValues, extractReferences } from 'fhir-runtime';\r\nimport { FhirDefinitionBridge, FhirRuntimeProvider, FhirSystem, parseSearchRequest, executeSearch } from 'fhir-persistence';\r\n\r\nimport { createAdapter } from './adapter-factory.js';\r\nimport { loadFhirConfig } from './config.js';\r\nimport { createConsoleLogger } from './logger.js';\r\nimport { resolvePackages } from './package-resolver.js';\r\nimport type { EngineContext, FhirEngine, FhirEngineConfig, FhirEnginePlugin, FhirEngineStatus } from './types.js';\r\n\r\n/**\r\n * Resolve the SQL dialect from the database config type.\r\n */\r\nfunction resolveDialect(type: FhirEngineConfig['database']['type']): 'sqlite' | 'postgres' {\r\n switch (type) {\r\n case 'sqlite':\r\n case 'sqlite-wasm':\r\n return 'sqlite';\r\n case 'postgres':\r\n return 'postgres';\r\n }\r\n}\r\n\r\n/**\r\n * Validate the engine configuration, throwing on missing required fields.\r\n */\r\nfunction validateConfig(config: FhirEngineConfig): void {\r\n if (!config.database) {\r\n throw new Error('fhir-engine: config.database is required');\r\n }\r\n if (!config.database.type) {\r\n throw new Error('fhir-engine: config.database.type is required (sqlite | sqlite-wasm | postgres)');\r\n }\r\n if (!config.packages) {\r\n throw new Error('fhir-engine: config.packages is required');\r\n }\r\n if (!config.packages.path) {\r\n throw new Error('fhir-engine: config.packages.path is required');\r\n }\r\n}\r\n\r\n/**\r\n * Run a lifecycle hook on all plugins in order.\r\n * Wraps errors with the plugin name for clear diagnostics.\r\n */\r\nasync function runPluginHook(\r\n plugins: FhirEnginePlugin[],\r\n hook: 'init' | 'start' | 'ready',\r\n ctx: EngineContext,\r\n): Promise {\r\n for (const plugin of plugins) {\r\n const fn = plugin[hook];\r\n if (fn) {\r\n try {\r\n await fn.call(plugin, ctx);\r\n } catch (err) {\r\n throw new Error(\r\n `fhir-engine: plugin \"${plugin.name}\" failed during ${hook}: ${err instanceof Error ? err.message : String(err)}`,\r\n { cause: err },\r\n );\r\n }\r\n }\r\n }\r\n}\r\n\r\n/**\r\n * Create and bootstrap a fully initialized FHIR engine.\r\n *\r\n * This is the single entry point for all FHIR applications.\r\n * It assembles fhir-definition, fhir-runtime, and fhir-persistence\r\n * into a running system from a single configuration object.\r\n *\r\n * @example\r\n * ```ts\r\n * const engine = await createFhirEngine({\r\n * database: { type: 'sqlite', path: ':memory:' },\r\n * packages: { path: './fhir-packages' },\r\n * });\r\n *\r\n * const patient = await engine.persistence.createResource('Patient', {\r\n * resourceType: 'Patient',\r\n * name: [{ family: 'Smith', given: ['John'] }],\r\n * });\r\n *\r\n * await engine.stop();\r\n * ```\r\n */\r\nexport async function createFhirEngine(config?: FhirEngineConfig): Promise {\r\n // \u2500\u2500 0. Resolve config \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n if (!config) {\r\n config = await loadFhirConfig();\r\n }\r\n validateConfig(config);\r\n\r\n const logger = config.logger ?? createConsoleLogger();\r\n const plugins = config.plugins ?? [];\r\n logger.info('Initializing fhir-engine...');\r\n\r\n // \u2500\u2500 1a. Resolve packages (download/link if config.igs is set) \u2500\r\n if (config.igs && config.igs.length > 0) {\r\n logger.info(`Resolving ${config.igs.length} IG package(s)...`);\r\n const resolveResult = await resolvePackages(config, { logger });\r\n for (const pkg of resolveResult.packages) {\r\n logger.info(`Resolved ${pkg.name}@${pkg.version} (${pkg.source})`);\r\n }\r\n if (!resolveResult.success) {\r\n for (const err of resolveResult.errors) {\r\n logger.warn(`Failed to resolve package ${err.name}: ${err.error}`);\r\n }\r\n }\r\n }\r\n\r\n // \u2500\u2500 1b. Load FHIR definitions \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n logger.info(`Loading FHIR packages from: ${config.packages.path}`);\r\n const { registry, result } = loadDefinitionPackages(config.packages.path);\r\n logger.info(\r\n `Loaded ${result.packages.length} package(s): ${result.packages.map((p) => `${p.name}@${p.version}`).join(', ')}`,\r\n );\r\n\r\n // \u2500\u2500 2. Create fhir-runtime \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n logger.info('Creating fhir-runtime instance...');\r\n const runtime = await createRuntime({ definitions: registry, preloadCore: false });\r\n\r\n // \u2500\u2500 3. Build provider bridges \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n const definitionBridge = new FhirDefinitionBridge(registry);\r\n const runtimeProvider = new FhirRuntimeProvider({\r\n extractSearchValues,\r\n extractAllSearchValues,\r\n extractReferences,\r\n });\r\n\r\n // \u2500\u2500 4. Create storage adapter \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n const adapter = await createAdapter(config.database, logger);\r\n\r\n // \u2500\u2500 5. Build EngineContext \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n const ctx: { -readonly [K in keyof EngineContext]: EngineContext[K] } = {\r\n config,\r\n definitions: registry,\r\n runtime,\r\n adapter,\r\n persistence: undefined,\r\n logger,\r\n };\r\n\r\n // \u2500\u2500 6. INIT phase \u2014 plugins run before persistence \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n if (plugins.length > 0) {\r\n logger.info(`Running init for ${plugins.length} plugin(s): ${plugins.map((p) => p.name).join(', ')}`);\r\n await runPluginHook(plugins, 'init', ctx);\r\n }\r\n\r\n // \u2500\u2500 7. Initialize FhirSystem \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n const dialect = resolveDialect(config.database.type);\r\n const system = new FhirSystem(adapter, {\r\n dialect,\r\n runtimeProvider,\r\n packageName: config.packageName ?? 'fhir-engine.default',\r\n packageVersion: config.packageVersion ?? '1.0.0',\r\n });\r\n\r\n logger.info('Initializing persistence system (schema + migration)...');\r\n const { persistence, sdRegistry, spRegistry, igResult, resourceTypes } =\r\n await system.initialize(definitionBridge);\r\n\r\n // Fail fast if IG migration had errors (tables not created)\r\n if (igResult.error) {\r\n throw new Error(\r\n `fhir-engine: schema migration failed: ${igResult.error}`,\r\n );\r\n }\r\n\r\n logger.info(`Persistence ready \u2014 IG action: ${igResult.action}, ${resourceTypes.length} resource type(s)`);\r\n\r\n // ctx.persistence now available\r\n ctx.persistence = persistence;\r\n\r\n // \u2500\u2500 8. START phase \u2014 plugins can access persistence \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n if (plugins.length > 0) {\r\n logger.info(`Running start for ${plugins.length} plugin(s)...`);\r\n await runPluginHook(plugins, 'start', ctx);\r\n }\r\n\r\n // \u2500\u2500 9. READY phase \u2014 system fully operational \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n if (plugins.length > 0) {\r\n logger.info(`Running ready for ${plugins.length} plugin(s)...`);\r\n await runPluginHook(plugins, 'ready', ctx);\r\n }\r\n\r\n // \u2500\u2500 10. Return FhirEngine \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\r\n let stopped = false;\r\n const startedAt = new Date();\r\n const loadedPackages = result.packages.map((p) => `${p.name}@${p.version}`);\r\n const fhirVersions = [...new Set(\r\n result.packages\r\n .map((p) => {\r\n if (p.name.includes('.r4.')) return '4.0';\r\n if (p.name.includes('.r4b.')) return '4.3';\r\n if (p.name.includes('.r5.')) return '5.0';\r\n return undefined;\r\n })\r\n .filter(Boolean),\r\n )] as string[];\r\n\r\n const engine: FhirEngine = {\r\n definitions: registry,\r\n runtime,\r\n adapter,\r\n persistence,\r\n sdRegistry,\r\n spRegistry,\r\n igResult,\r\n resourceTypes,\r\n logger,\r\n context: ctx as EngineContext,\r\n\r\n async search(resourceType, queryParams, options) {\r\n const request = parseSearchRequest(resourceType, queryParams, spRegistry);\r\n return executeSearch(adapter, request, spRegistry, options);\r\n },\r\n\r\n status(): FhirEngineStatus {\r\n return {\r\n fhirVersions,\r\n loadedPackages,\r\n resourceTypes,\r\n databaseType: config.database.type,\r\n igAction: igResult.action,\r\n startedAt,\r\n plugins: plugins.map((p) => p.name),\r\n };\r\n },\r\n\r\n async stop() {\r\n if (stopped) return;\r\n stopped = true;\r\n logger.info('Stopping fhir-engine...');\r\n\r\n // Stop plugins in reverse registration order\r\n for (let i = plugins.length - 1; i >= 0; i--) {\r\n const plugin = plugins[i];\r\n if (plugin.stop) {\r\n try {\r\n await plugin.stop.call(plugin, ctx as EngineContext);\r\n } catch (err) {\r\n logger.error(\r\n `Plugin \"${plugin.name}\" failed during stop: ${err instanceof Error ? err.message : String(err)}`,\r\n );\r\n }\r\n }\r\n }\r\n\r\n await adapter.close();\r\n logger.info('fhir-engine stopped.');\r\n },\r\n };\r\n\r\n logger.info('fhir-engine ready.');\r\n return engine;\r\n}\r\n", "import { BetterSqlite3Adapter, PostgresAdapter } from 'fhir-persistence';\r\nimport type { StorageAdapter } from 'fhir-persistence';\r\nimport type { DatabaseConfig, Logger } from './types.js';\r\n\r\n/**\r\n * Create a StorageAdapter from the database configuration.\r\n *\r\n * Supported adapters:\r\n * - `sqlite` \u2192 BetterSqlite3Adapter (native, Node.js / Electron)\r\n * - `sqlite-wasm` \u2192 removed in fhir-persistence v0.3.0; use `sqlite` instead\r\n * - `postgres` \u2192 PostgresAdapter (pg connection pool)\r\n */\r\nexport async function createAdapter(config: DatabaseConfig, logger: Logger): Promise {\r\n switch (config.type) {\r\n case 'sqlite': {\r\n logger.info(`Creating BetterSqlite3Adapter (path: ${config.path})`);\r\n return new BetterSqlite3Adapter({\r\n path: config.path,\r\n wal: config.wal ?? true,\r\n busyTimeout: config.busyTimeout ?? 5000,\r\n });\r\n }\r\n\r\n case 'sqlite-wasm': {\r\n throw new Error(\r\n 'fhir-engine: sqlite-wasm adapter was removed in fhir-persistence v0.3.0. ' +\r\n 'Use database.type = \"sqlite\" (BetterSqlite3Adapter) instead.',\r\n );\r\n }\r\n\r\n case 'postgres': {\r\n logger.info(`Creating PostgresAdapter (url: ${config.url.replace(/\\/\\/.*@/, '//*****@')})`);\r\n // Dynamic import pg to avoid hard dependency when using SQLite only\r\n let Pool: any;\r\n try {\r\n const pg = await import('pg');\r\n Pool = pg.default?.Pool ?? pg.Pool;\r\n } catch {\r\n throw new Error(\r\n 'fhir-engine: PostgreSQL requires the \"pg\" package. Install it with: npm install pg',\r\n );\r\n }\r\n const pool = new Pool({\r\n connectionString: config.url,\r\n max: config.max ?? 10,\r\n idleTimeoutMillis: config.idleTimeoutMillis ?? 30000,\r\n connectionTimeoutMillis: config.connectionTimeoutMillis ?? 0,\r\n });\r\n return new PostgresAdapter(pool);\r\n }\r\n\r\n default: {\r\n const _exhaustive: never = config;\r\n throw new Error(`fhir-engine: unknown database type: ${(_exhaustive as DatabaseConfig).type}`);\r\n }\r\n }\r\n}\r\n", "import { existsSync, readFileSync } from 'node:fs';\nimport { resolve, extname } from 'node:path';\nimport { pathToFileURL } from 'node:url';\nimport type { FhirEngineConfig, DatabaseConfig } from './types.js';\n\n// ---------------------------------------------------------------------------\n// defineConfig \u2014 typed identity helper for fhir.config.ts / .js\n// ---------------------------------------------------------------------------\n\n/**\n * Type-safe config helper for `fhir.config.ts` / `fhir.config.js`.\n *\n * @example\n * ```ts\n * // fhir.config.ts\n * import { defineConfig } from 'fhir-engine';\n *\n * export default defineConfig({\n * database: { type: 'sqlite', path: './fhir.db' },\n * packages: { path: './fhir-packages' },\n * });\n * ```\n */\nexport function defineConfig(config: FhirEngineConfig): FhirEngineConfig {\n return config;\n}\n\n// ---------------------------------------------------------------------------\n// Config file discovery order\n// ---------------------------------------------------------------------------\n\nconst CONFIG_FILENAMES = [\n 'fhir.config.ts',\n 'fhir.config.js',\n 'fhir.config.mjs',\n 'fhir.config.json',\n] as const;\n\n// ---------------------------------------------------------------------------\n// loadFhirConfig \u2014 auto-discover and load config\n// ---------------------------------------------------------------------------\n\n/**\n * Load engine configuration from a file.\n *\n * If `configPath` is provided, loads that exact file.\n * Otherwise, searches the current working directory for config files\n * in this order: `fhir.config.ts` \u2192 `fhir.config.js` \u2192 `fhir.config.mjs` \u2192 `fhir.config.json`.\n *\n * Environment variable overrides are applied on top of the loaded config.\n *\n * @param configPath - Explicit path to a config file (optional).\n * @returns The resolved `FhirEngineConfig`.\n */\nexport async function loadFhirConfig(configPath?: string): Promise {\n let resolvedPath: string;\n\n if (configPath) {\n resolvedPath = resolve(configPath);\n if (!existsSync(resolvedPath)) {\n throw new Error(`fhir-engine: config file not found: ${resolvedPath}`);\n }\n } else {\n const cwd = process.cwd();\n const found = CONFIG_FILENAMES\n .map((name) => resolve(cwd, name))\n .find((p) => existsSync(p));\n if (!found) {\n throw new Error(\n `fhir-engine: no config file found in ${cwd}. ` +\n `Expected one of: ${CONFIG_FILENAMES.join(', ')}`,\n );\n }\n resolvedPath = found;\n }\n\n const config = await loadConfigFile(resolvedPath);\n return applyEnvOverrides(config);\n}\n\n// ---------------------------------------------------------------------------\n// File loaders\n// ---------------------------------------------------------------------------\n\nasync function loadConfigFile(filePath: string): Promise {\n const ext = extname(filePath);\n\n if (ext === '.json') {\n return loadJsonConfig(filePath);\n }\n\n if (ext === '.ts' || ext === '.js' || ext === '.mjs') {\n return loadModuleConfig(filePath);\n }\n\n throw new Error(`fhir-engine: unsupported config file extension: ${ext}`);\n}\n\nfunction loadJsonConfig(filePath: string): FhirEngineConfig {\n try {\n const raw = readFileSync(filePath, 'utf-8');\n return JSON.parse(raw) as FhirEngineConfig;\n } catch (err) {\n throw new Error(\n `fhir-engine: failed to parse config file ${filePath}: ${err instanceof Error ? err.message : String(err)}`,\n { cause: err },\n );\n }\n}\n\nasync function loadModuleConfig(filePath: string): Promise {\n try {\n const fileUrl = pathToFileURL(filePath).href;\n const mod = await import(fileUrl);\n const config = mod.default ?? mod;\n\n if (!config || typeof config !== 'object') {\n throw new Error('config file must export a FhirEngineConfig object as default export');\n }\n\n return config as FhirEngineConfig;\n } catch (err) {\n if (err instanceof Error && err.message.includes('must export')) {\n throw err;\n }\n throw new Error(\n `fhir-engine: failed to load config file ${filePath}: ${err instanceof Error ? err.message : String(err)}`,\n { cause: err },\n );\n }\n}\n\n// ---------------------------------------------------------------------------\n// Environment variable overrides\n// ---------------------------------------------------------------------------\n\nconst VALID_DB_TYPES = ['sqlite', 'sqlite-wasm', 'postgres'] as const;\n\n/**\n * Apply environment variable overrides on top of a loaded config.\n *\n * | Env Variable | Overrides |\n * |---------------------|----------------------------------|\n * | FHIR_DATABASE_TYPE | config.database.type |\n * | FHIR_DATABASE_URL | config.database.path / .url |\n * | FHIR_PACKAGES_PATH | config.packages.path |\n * | FHIR_LOG_LEVEL | (stored for logger filtering) |\n */\nexport function applyEnvOverrides(config: FhirEngineConfig): FhirEngineConfig {\n const result = structuredClone(config);\n\n const dbType = process.env.FHIR_DATABASE_TYPE;\n const dbUrl = process.env.FHIR_DATABASE_URL;\n const pkgPath = process.env.FHIR_PACKAGES_PATH;\n\n if (dbType) {\n if (!VALID_DB_TYPES.includes(dbType as typeof VALID_DB_TYPES[number])) {\n throw new Error(\n `fhir-engine: FHIR_DATABASE_TYPE must be one of: ${VALID_DB_TYPES.join(', ')}. Got: \"${dbType}\"`,\n );\n }\n // Rebuild database config with overridden type\n const validType = dbType as DatabaseConfig['type'];\n if (validType === 'postgres') {\n result.database = { type: 'postgres', url: (result.database as { url?: string }).url ?? '' };\n } else if (validType === 'sqlite-wasm') {\n result.database = { type: 'sqlite-wasm', path: (result.database as { path?: string }).path ?? '' };\n } else {\n result.database = { type: 'sqlite', path: (result.database as { path?: string }).path ?? '' };\n }\n }\n\n if (dbUrl) {\n const type = result.database?.type;\n if (type === 'postgres') {\n result.database = { ...result.database, type: 'postgres', url: dbUrl };\n } else if (type === 'sqlite-wasm') {\n result.database = { ...result.database, type: 'sqlite-wasm', path: dbUrl };\n } else {\n result.database = { ...result.database, type: 'sqlite', path: dbUrl };\n }\n }\n\n if (pkgPath) {\n result.packages = { ...result.packages, path: pkgPath };\n }\n\n return result;\n}\n", "import type { Logger } from './types.js';\n\n/**\n * Default console-based logger.\n */\nexport function createConsoleLogger(): Logger {\n return {\n debug: (message: string, ...args: unknown[]) => console.debug(`[fhir-engine] ${message}`, ...args),\n info: (message: string, ...args: unknown[]) => console.info(`[fhir-engine] ${message}`, ...args),\n warn: (message: string, ...args: unknown[]) => console.warn(`[fhir-engine] ${message}`, ...args),\n error: (message: string, ...args: unknown[]) => console.error(`[fhir-engine] ${message}`, ...args),\n };\n}\n", "import { resolve, join } from 'node:path';\nimport { existsSync, mkdirSync, symlinkSync, readFileSync, lstatSync, copyFileSync } from 'node:fs';\nimport { PackageCache, PackageRegistryClient } from 'fhir-definition';\n\nimport type { FhirEngineConfig, ResolvePackagesOptions, ResolvedPackage, ResolvePackagesResult, Logger } from './types.js';\n\n/**\n * Ensure the given directory exists (recursive mkdir).\n */\nfunction ensureDirSync(dir: string): void {\n if (!existsSync(dir)) {\n mkdirSync(dir, { recursive: true });\n }\n}\n\n/**\n * Check if a directory contains a FHIR package manifest.\n * Checks both root/package.json and package/package.json\n * (cached packages store content in a 'package' subdirectory).\n */\nfunction hasManifest(dir: string): boolean {\n return existsSync(join(dir, 'package.json')) || existsSync(join(dir, 'package', 'package.json'));\n}\n\n/**\n * Read the version from a package.json file.\n * Checks both root and package/ subdirectory.\n * Returns the version string or 'local' if not found.\n */\nfunction readLocalVersion(pkgDir: string): string {\n for (const candidate of [join(pkgDir, 'package.json'), join(pkgDir, 'package', 'package.json')]) {\n try {\n const raw = readFileSync(candidate, 'utf-8');\n const manifest = JSON.parse(raw);\n return manifest.version ?? 'local';\n } catch {\n // try next candidate\n }\n }\n return 'local';\n}\n\n/**\n * Resolve FHIR packages into a project's packages directory.\n *\n * Resolution order for each package:\n * 1. Already exists in packagesPath \u2192 use as-is (source: 'local')\n * 2. Found in system cache (~/.fhir/packages) \u2192 create symlink/junction (source: 'cache')\n * 3. Download from FHIR Package Registry \u2192 cache \u2192 create symlink (source: 'download')\n *\n * @param config Engine configuration (uses config.igs and config.packages.path)\n * @param options Override packages list, target path, download policy, or logger\n * @returns Result with resolved packages and any errors\n *\n * @example\n * ```ts\n * const result = await resolvePackages(config);\n * if (!result.success) {\n * console.warn('Some packages failed:', result.errors);\n * }\n * ```\n */\nexport async function resolvePackages(\n config: FhirEngineConfig,\n options?: ResolvePackagesOptions,\n): Promise {\n const packagesPath = resolve(options?.packagesPath ?? config.packages.path);\n const igs = options?.packages ?? config.igs ?? [];\n const allowDownload = options?.allowDownload ?? config.packageResolve?.allowDownload ?? true;\n const logger: Logger | undefined = options?.logger ?? config.logger;\n\n const cache = new PackageCache();\n const client = new PackageRegistryClient();\n const results: ResolvedPackage[] = [];\n const errors: Array<{ name: string; error: string }> = [];\n\n ensureDirSync(packagesPath);\n\n for (const ig of igs) {\n try {\n // 1. Already exists locally?\n const localPath = join(packagesPath, ig.name);\n if (hasManifest(localPath)) {\n const localVersion = readLocalVersion(localPath);\n logger?.debug(`Package ${ig.name} already exists locally at ${localPath}`);\n results.push({ name: ig.name, version: localVersion, path: localPath, source: 'local' });\n continue;\n }\n\n // 2. Resolve version\n let version = ig.version ?? 'latest';\n if (version === 'latest') {\n if (!allowDownload) {\n errors.push({\n name: ig.name,\n error: `Cannot resolve \"latest\" version for ${ig.name} without network access`,\n });\n continue;\n }\n logger?.info(`Resolving latest version for ${ig.name}...`);\n version = await client.getLatestVersion(ig.name);\n logger?.info(`Latest version for ${ig.name}: ${version}`);\n }\n\n // 3. Check system cache\n const cachePath = cache.getPath(ig.name, version);\n if (cachePath) {\n // Cache hit \u2014 create symlink\n logger?.info(`Found ${ig.name}@${version} in system cache, linking...`);\n ensureCacheRootManifest(cachePath);\n createLink(cachePath, localPath);\n results.push({ name: ig.name, version, path: localPath, source: 'cache' });\n continue;\n }\n\n // 4. Download\n if (!allowDownload) {\n errors.push({\n name: ig.name,\n error: `Package ${ig.name}@${version} not found in cache, and downloads are disabled`,\n });\n continue;\n }\n\n logger?.info(`Downloading ${ig.name}@${version} from registry...`);\n const tarball = await client.download(ig.name, version);\n cache.put(ig.name, version, tarball);\n logger?.info(`Downloaded and cached ${ig.name}@${version}`);\n\n // Create symlink from cache to project packages dir\n const newCachePath = cache.getPath(ig.name, version);\n if (!newCachePath) {\n errors.push({ name: ig.name, error: `Failed to locate cached package after download` });\n continue;\n }\n ensureCacheRootManifest(newCachePath);\n createLink(newCachePath, localPath);\n results.push({ name: ig.name, version, path: localPath, source: 'download' });\n } catch (err) {\n errors.push({\n name: ig.name,\n error: err instanceof Error ? err.message : String(err),\n });\n }\n }\n\n return {\n success: errors.length === 0,\n packages: results,\n errors,\n };\n}\n\n/**\n * Ensure the cache root directory has a package.json manifest.\n * Some tools (e.g. Firely Terminal) only place package.json inside the\n * package/ subdirectory. Without a root manifest, PackageScanner discovers\n * the package at the wrong depth, causing PackageLoader to construct a\n * double-nested \"package/package\" path that doesn't exist (\u2192 0 resources).\n */\nfunction ensureCacheRootManifest(cachePath: string): void {\n const rootManifest = join(cachePath, 'package.json');\n const nestedManifest = join(cachePath, 'package', 'package.json');\n if (!existsSync(rootManifest) && existsSync(nestedManifest)) {\n copyFileSync(nestedManifest, rootManifest);\n }\n}\n\n/**\n * Create a directory junction (Windows) or symlink (Unix) from target to linkPath.\n * Idempotent \u2014 if link already exists, does nothing.\n */\nfunction createLink(target: string, linkPath: string): void {\n if (existsSync(linkPath)) {\n // Already exists (either real dir or symlink) \u2014 skip\n try {\n const stat = lstatSync(linkPath);\n if (stat.isSymbolicLink() || stat.isDirectory()) {\n return;\n }\n } catch {\n // If stat fails, try to create anyway\n }\n }\n // Use 'junction' on Windows (no admin needed), 'dir' on Unix\n const linkType = process.platform === 'win32' ? 'junction' : 'dir';\n symlinkSync(target, linkPath, linkType);\n}\n", "// fhir-engine \u2014 public API\n\nexport { createFhirEngine } from './engine.js';\nexport { defineConfig, loadFhirConfig } from './config.js';\nexport { createConsoleLogger } from './logger.js';\nexport { createAdapter } from './adapter-factory.js';\nexport { resolvePackages } from './package-resolver.js';\n\nexport type {\n FhirEngine,\n FhirEngineConfig,\n FhirEnginePlugin,\n FhirEngineStatus,\n EngineContext,\n DatabaseConfig,\n SqliteDatabaseConfig,\n SqliteWasmDatabaseConfig,\n PostgresDatabaseConfig,\n PackagesConfig,\n Logger,\n ResolvePackagesOptions,\n ResolvedPackage,\n ResolvePackagesResult,\n} from './types.js';\n\n// Re-export key upstream types for convenience\nexport type { DefinitionRegistry, DefinitionProvider } from 'fhir-definition';\nexport type { FhirRuntimeInstance } from 'fhir-runtime';\nexport type { FhirPersistence, StorageAdapter } from 'fhir-persistence';\n\n// ---------------------------------------------------------------------------\n// Search utilities (from fhir-persistence)\n// ---------------------------------------------------------------------------\n\nexport { parseSearchRequest, executeSearch } from 'fhir-persistence';\nexport type { SearchRequest, SearchResult, SearchOptions } from 'fhir-persistence';\n\n// ---------------------------------------------------------------------------\n// Reindex utilities (from fhir-persistence v0.6.0)\n// ---------------------------------------------------------------------------\n\nexport { reindexResourceTypeV2, reindexAllV2 } from 'fhir-persistence';\n\n// ---------------------------------------------------------------------------\n// FHIRPath evaluation (from fhir-runtime)\n// ---------------------------------------------------------------------------\n\nexport { evalFhirPath, evalFhirPathBoolean, evalFhirPathString, evalFhirPathTyped } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// Batch validation (from fhir-runtime v0.9.0)\n// ---------------------------------------------------------------------------\n\nexport type { BatchValidationOptions, BatchValidationResult } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// Profile Slicing utilities (from fhir-runtime v0.10.0)\n// ---------------------------------------------------------------------------\n\nexport { buildSlicingDefinition, makeExtensionSlicing, hasSliceName, extractSliceName, getSliceSiblings, validateSlicingCompatibility } from 'fhir-runtime';\nexport type { SlicingDefinition, SlicingDiscriminatorDef, SlicingRules } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// Choice Type utilities (from fhir-runtime v0.10.0)\n// ---------------------------------------------------------------------------\n\nexport { isChoiceTypePath, matchesChoiceType, extractChoiceTypeName } from 'fhir-runtime';\nexport type { ChoiceTypeField, ChoiceValue } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// BackboneElement utilities (from fhir-runtime v0.10.0)\n// ---------------------------------------------------------------------------\n\nexport { isBackboneElementType } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// IG Extraction utilities (from fhir-runtime v0.11.0)\n// ---------------------------------------------------------------------------\n\nexport { extractSDDependencies, extractElementIndexRows, flattenConceptHierarchy } from 'fhir-runtime';\nexport type { ElementIndexRow, ConceptRow } from 'fhir-runtime';\n\n// ---------------------------------------------------------------------------\n// Conformance module (from fhir-persistence v0.7.0)\n// ---------------------------------------------------------------------------\n\nexport { IGResourceMapRepo, SDIndexRepo, ElementIndexRepo, ExpansionCacheRepo, ConceptHierarchyRepo, SearchParamIndexRepo, IGImportOrchestrator } from 'fhir-persistence';\nexport type { IGResourceMapEntry, IGIndex, SDIndexEntry, ElementIndexEntry, CachedExpansion, ConceptHierarchyEntry, IGImportResult } from 'fhir-persistence';\n\n// ---------------------------------------------------------------------------\n// Error types (from fhir-persistence)\n// ---------------------------------------------------------------------------\n\nexport { RepositoryError, ResourceNotFoundError, ResourceVersionConflictError, ResourceGoneError } from 'fhir-persistence';\n\n// ---------------------------------------------------------------------------\n// Search Bundle utilities (from fhir-persistence)\n// ---------------------------------------------------------------------------\n\nexport { buildSearchBundle, buildPaginationContext, buildNextLink, buildSelfLink, hasNextPage, splitSearchValues, hashToken } from 'fhir-persistence';\nexport { DEFAULT_SEARCH_COUNT, MAX_SEARCH_COUNT } from 'fhir-persistence';\nexport type { SearchBundle, SearchBundleEntry, BuildSearchBundleOptions, PaginationContext } from 'fhir-persistence';\n"], "mappings": 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"names": ["resolve", "existsSync", "readFileSync", "parseSearchRequest", "executeSearch"] }