import type Dataset from "../model/dataset.js";
import type Job from "../model/job.js";
import MetadataFile from "../model/metadata-file.js";
export default class PhenodataUtils {
    static readonly PHENODATA_PREFIX = "phenodata";
    static readonly DEFAULT_PHENODATA_FILENAME = "phenodata.tsv";
    static readonly GROUP_COLOMN = "group";
    static hasOwnPhenodata(dataset: Dataset): boolean;
    static getOwnPhenodata(dataset: Dataset | null): string | null;
    static getOwnPhenodataFile(dataset: Dataset | null): MetadataFile | null | undefined;
    /**
     * If given dataset has its own phenodata, return that phenodata.
     * Otherwise search ancestors for a dataset which has phenodata and return phenodata
     * of that ancestor if found.
     *
     * @param dataset
     */
    static getPhenodata(dataset: Dataset, jobsMap: Map<string, Job>, datasetsMap: Map<string, Dataset>, phenodataTypeCheck: (dataset: Dataset) => boolean): string | null;
    /**
     * If given dataset has its own phenodata, return given dataset.
     * Otherwise search ancestors for a dataset which has phenodata and return that
     * ancestor if found.
     *
     * @param dataset
     */
    static getPhenodataDataset(dataset: Dataset, jobsMap: Map<string, Job>, datasetsMap: Map<string, Dataset>, phenodataTypeCheck: (dataset: Dataset) => boolean): Dataset | null;
    static getAncestorDatasetsWithPhenodata(dataset: Dataset, jobsMap: Map<string, Job>, datasetsMap: Map<string, Dataset>, phenodataTypeCheck: (dataset: Dataset) => boolean): Dataset[];
    /**
     * TODO Recursive and that _.uniqWith maybe not good.
     *
     * @param sessionData
     * @param datasets
     * @param filter
     */
    static getAncestorsBottomUpBreadthFirstWithFilter(datasets: Dataset[], filter: (dataset: Dataset) => boolean, jobsMap: Map<string, Job>, datasetsMap: Map<string, Dataset>): Dataset[];
    static getParentDatasets(dataset: Dataset, jobsMap: Map<string, Job>, datasetsMap: Map<string, Dataset>): Dataset[];
}
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