import { Decoder } from '../Utils/Json';
import { AnswerSpec, Parameter, ParameterValues } from '../Utils/WdkModel';
import { Omit } from '../Core/CommonTypes';
export interface User {
    id: number;
    email: string;
    isGuest: boolean;
    properties: Record<string, string>;
}
export declare type PreferenceScope = "global" | "project";
export declare type UserPreferences = Record<PreferenceScope, Record<string, string>>;
export interface UserWithPrefs {
    user: User;
    preferences: UserPreferences;
}
export declare type UserPredicate = (user: User) => boolean;
export interface FilterValue {
}
/**
 * Validation level performed on step.
 */
export declare enum StepValidationLevel {
    None = "NONE",
    Syntactic = "SYNTACTIC",
    Displayable = "DISPLAYABLE",
    Semantic = "SEMANTIC",
    Runnable = "RUNNABLE"
}
export interface ValidStepValidation {
    isValid: true;
    level: StepValidationLevel;
}
export interface InvalidStepValidation {
    isValid: false;
    level: StepValidationLevel;
    errors: {
        general: string[];
        byKey: Record<string, string[] | undefined>;
    };
}
export interface Step extends AnswerSpec {
    customName: string;
    description: string;
    displayName: string;
    estimatedSize?: number;
    hasCompleteStepAnalyses: boolean;
    id: number;
    isFiltered: boolean;
    ownerId: number;
    recordClassName: string;
    shortDisplayName: string;
    strategyId: number;
    displayPreferences: {
        columnSelection?: string[];
        sortColumns?: {
            name: string;
            direction: 'ASC' | 'DESC';
        }[];
    };
    expanded: boolean;
    expandedName?: string;
    validation: ValidStepValidation | InvalidStepValidation;
}
export interface PatchStepSpec {
    customName?: string;
    expanded?: boolean;
    expandedName?: string;
    displayPreferences?: Step['displayPreferences'];
}
export interface NewStepSpec extends PatchStepSpec, AnswerSpec {
}
export interface SaveStrategyOptions {
    removeOrigin: boolean;
}
export interface StrategyProperties {
    name: string;
    isSaved: boolean;
    isPublic: boolean;
    description?: string;
    savedName?: string;
}
export declare type EditStrategySpec = Omit<StrategyProperties, 'isSaved'>;
export interface StrategySummary extends StrategyProperties {
    nameOfFirstStep?: string;
    strategyId: number;
    rootStepId: number;
    estimatedSize?: number;
    isValid: boolean;
    lastModified: string;
    createdTime: string;
    releaseVersion?: string;
    recordClassName: string | null;
    signature: string;
    author?: string;
    organization?: string;
    isDeleted: boolean;
    isExample: boolean;
}
export interface StrategyDetails extends StrategySummary {
    stepTree: StepTree;
    steps: Record<number, Step>;
}
export declare const strategySummaryDecoder: Decoder<StrategySummary>;
export interface StepTree {
    stepId: number;
    primaryInput?: StepTree;
    secondaryInput?: StepTree;
}
export interface NewStrategySpec extends StrategyProperties {
    stepTree: StepTree;
}
export interface DuplicateStrategySpec {
    sourceStrategySignature: string;
}
export interface DeleteStrategySpec {
    strategyId: number;
    isDeleted: boolean;
}
export declare type PubmedPreview = PubmedPreviewEntry[];
export interface PubmedPreviewEntry {
    id: string;
    title: string;
    journal?: string;
    author: string;
    url: string;
}
export interface UserCommentAttachedFileSpec {
    file: File | null;
    description: string;
}
export interface KeyedUserCommentAttachedFileSpec extends UserCommentAttachedFileSpec {
    id: number;
}
export interface UserCommentAttachedFile {
    id: number;
    description: string;
    name: string;
    mimeType: string;
}
export declare type ReviewStatus = "accepted" | "adopted" | "community" | "not_spam" | "rejected" | "spam" | "task" | "unknown";
export interface UserCommentLocation {
    coordinateType: string;
    ranges: {
        start: number;
        end: number;
    }[];
    reverse?: boolean;
}
export interface UserCommentFormFields {
    content?: string;
    headline?: string;
    genBankAccessions?: string[];
    categoryIds?: number[];
    digitalObjectIds?: string[];
    pubMedIds?: string[];
    relatedStableIds?: string[];
    additionalAuthors?: string[];
    location?: UserCommentLocation;
}
export interface UserCommentRawFormFields {
    coordinateType: string;
    ranges: string;
    pubMedIds: string;
    digitalObjectIds: string;
    genBankAccessions: string;
    relatedStableIds: string;
}
export interface UserCommentPostRequest extends UserCommentFormFields {
    previousCommentId?: number;
    target?: {
        type: string;
        id: string;
    };
    organism?: string;
    author?: {
        organization: string;
        userId: number;
        firstName: string;
        lastName: string;
    };
    externalDatabase?: {
        name: string;
        version: string;
    };
}
export interface UserComment extends UserCommentPostRequest {
    attachedFiles?: UserCommentAttachedFile[];
}
export interface UserCommentGetResponse {
    additionalAuthors: string[];
    attachments: UserCommentAttachedFile[];
    author: {
        userId: number;
        firstName: string;
        lastName: string;
        organization: string;
    };
    categories: string[];
    commentDate: number;
    conceptual: boolean;
    content: string;
    digitalObjectIds: string[];
    externalDatabase?: {
        name: string;
        version: string;
    };
    genBankAccessions: string[];
    headline?: string;
    id: number;
    location?: UserCommentLocation;
    project: {
        name: string;
        version: string;
    };
    organism?: string;
    pubMedRefs: PubmedPreview;
    relatedStableIds: string[];
    reviewStatus: ReviewStatus;
    sequence?: string;
    target: {
        type: string;
        id: string;
    };
}
export interface UserCommentPostResponse {
    id: number;
}
export interface UserCommentAttachedFilePostResponse {
    id: number;
}
export declare function extractParamValues(parameters: Parameter[], initialParams?: ParameterValues, step?: Step): Record<string, string>;
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