/**
 * FHIR Version R5
 * The following is auto generated resource definition.
 *
 * OpenAPI spec version: 3.0.1
 * 
 *
 * NOTE: This class is auto generated by the swagger code generator program.
 * https://github.com/swagger-api/swagger-codegen.git
 * Do not edit the class manually.
 */
import { Attachment } from './attachment';
import { Code } from './code';
import { Extension } from './extension';
import { Id } from './id';
import { Identifier } from './identifier';
import { Meta } from './meta';
import { MolecularSequenceRelative } from './molecularSequenceRelative';
import { Narrative } from './narrative';
import { Reference } from './reference';
import { ResourceList } from './resourceList';
import { Uri } from './uri';

/**
 * Representation of a molecular sequence.
 */
export interface MolecularSequence { 
    /**
     * This is a MolecularSequence resource
     */
    resourceType: 'MolecularSequence';
    id?: Id;
    meta?: Meta;
    implicitRules?: Uri;
    language?: Code;
    text?: Narrative;
    /**
     * These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, nor can they have their own independent transaction scope. This is allowed to be a Parameters resource if and only if it is referenced by a resource that provides context/meaning.
     */
    contained?: Array<ResourceList>;
    /**
     * May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
     */
    extension?: Array<Extension>;
    /**
     * May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.  Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).
     */
    modifierExtension?: Array<Extension>;
    /**
     * A unique identifier for this particular sequence instance.
     */
    identifier?: Array<Identifier>;
    type?: Code;
    subject?: Reference;
    /**
     * The actual focus of a molecular sequence when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, child, or sibling. For example, in trio testing, the subject would be the child (proband) and the focus would be the parent.
     */
    focus?: Array<Reference>;
    specimen?: Reference;
    device?: Reference;
    performer?: Reference;
    literal?: string;
    /**
     * Sequence that was observed as file content. Can be an actual file contents, or referenced by a URL to an external system.
     */
    formatted?: Array<Attachment>;
    /**
     * A sequence defined relative to another sequence.
     */
    relative?: Array<MolecularSequenceRelative>;
}