/* tslint:disable */
/* eslint-disable */

/**
 * Get the byte position where the header ends (first data container starts)
 *
 * # Arguments
 * * `data` - The CRAM file data (only needs first ~64KB typically)
 */
export function get_header_length(data: Uint8Array): bigint;

export function init_panic_hook(): void;

export function parse_crai_index(data: Uint8Array): any;

export function parse_cram_file(data: Uint8Array): any;

/**
 * Parse a CRAM file with reference sequences provided
 *
 * # Arguments
 * * `data` - The CRAM file data as bytes
 * * `references` - Array of {name: string, sequence: string} objects
 */
export function parse_cram_file_with_references(data: Uint8Array, references: any): any;

/**
 * Parse records from a specific region of a CRAM file
 *
 * This function is designed for indexed access. It takes:
 * - header_data: The CRAM file from start up to the first data container
 * - container_data: The bytes of the container(s) to parse
 * - references: Reference sequences needed for decoding
 *
 * # Arguments
 * * `header_data` - Bytes from file start through header container
 * * `container_data` - Bytes of the data container(s) to parse
 * * `references` - Array of {name: string, sequence: string} objects
 */
export function parse_cram_records_from_container(header_data: Uint8Array, container_data: Uint8Array, references: any): any;

export function parse_header(data: Uint8Array): any;