{
 "corpus": "synbio-schema-corpus",
 "version": 1,
 "note": "expect = intended verdict; dual-side runners must agree with each other AND with expect",
 "cases": [
  {
   "id": "gvr-01",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-02",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "missing required source",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-03",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "2-based",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "bad enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-04",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z",
    "zzz_extra": 1
   },
   "expect": "invalid",
   "note": "additionalProperties false",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-05",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb\n",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "sha256 trailing-LF (matcher layer)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-06",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z\n"
   },
   "expect": "invalid",
   "note": "timestamp trailing-LF (matcher layer)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-07",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "astral non-ASCII sha: DOMAIN-first (cross-side exact code)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-08",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀😀",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "astral overlong sha: DOMAIN-first beats MAX_LEN (order oracle)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gvr-09",
   "schema": "genome_ref",
   "doc": {
    "artifact_type": "genome_ref@1",
    "files": [
     {
      "path": "genome.fna",
      "sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "format": "fasta"
     }
    ],
    "contigs": [
     {
      "name": "chr1",
      "length": 4641652,
      "topology": "circular"
     }
    ],
    "coord_convention": "0-based-half-open",
    "source": "NCBI RefSeq GCF_000005845.2",
    "fetched_at": "2026-10-13T12:00:00Z"
   },
   "expect": "invalid",
   "note": "ascii overlong sha: MAX_LEN",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ins-01",
   "schema": "input_snapshot",
   "doc": {
    "artifact_type": "input_snapshot@1",
    "role": "genome_sequence",
    "media_type": "text/x-fasta",
    "format": "fasta",
    "consumer_compatibility": [
     "bio_chassis_profile"
    ],
    "sha256": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
    "byte_size": 4708035,
    "origin": {
     "kind": "external",
     "origin_ref": "upload:genome.fna"
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ins-02",
   "schema": "input_snapshot",
   "doc": {
    "artifact_type": "input_snapshot@1",
    "role": "genome_sequence",
    "media_type": "text/x-fasta",
    "format": "fasta",
    "consumer_compatibility": [
     "bio_chassis_profile"
    ],
    "byte_size": 4708035,
    "origin": {
     "kind": "external",
     "origin_ref": "upload:genome.fna"
    }
   },
   "expect": "invalid",
   "note": "missing required sha256",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ins-03",
   "schema": "input_snapshot",
   "doc": {
    "artifact_type": "input_snapshot@1",
    "role": "unknown_role",
    "media_type": "text/x-fasta",
    "format": "fasta",
    "consumer_compatibility": [
     "bio_chassis_profile"
    ],
    "sha256": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
    "byte_size": 4708035,
    "origin": {
     "kind": "external",
     "origin_ref": "upload:genome.fna"
    }
   },
   "expect": "invalid",
   "note": "bad enum role",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ins-04",
   "schema": "input_snapshot",
   "doc": {
    "artifact_type": "input_snapshot@1",
    "role": "genome_sequence",
    "media_type": "text/x-fasta",
    "format": "fasta",
    "consumer_compatibility": [
     "bio_chassis_profile"
    ],
    "sha256": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
    "byte_size": 4708035,
    "origin": {
     "kind": "external",
     "origin_ref": "upload:genome.fna"
    },
    "extra": true
   },
   "expect": "invalid",
   "note": "additionalProperties false",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hpf-01",
   "schema": "host_profile",
   "doc": {
    "artifact_type": "host_profile@1",
    "genome_ref": {
     "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "relative_path": "objects/dddddddddddddddd"
    },
    "evidence_state": {
     "annotation": {
      "completeness": "full"
     },
     "condition": {
      "completeness": "partial"
     },
     "parts_evidence": {
      "completeness": "missing"
     }
    },
    "derived": {
     "genome_size": 4641652,
     "gc_percent": 50.8,
     "contig_count": 1
    },
    "gates": [
     {
      "gate": "annotation_parse",
      "status": "PASS"
     }
    ]
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hpf-02",
   "schema": "host_profile",
   "doc": {
    "artifact_type": "host_profile@1",
    "genome_ref": {
     "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "relative_path": "objects/dddddddddddddddd"
    },
    "evidence_state": {
     "annotation": {
      "completeness": "full"
     },
     "condition": {
      "completeness": "partial"
     },
     "parts_evidence": {
      "completeness": "missing"
     }
    },
    "gates": [
     {
      "gate": "annotation_parse",
      "status": "PASS"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing required derived",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hpf-03",
   "schema": "host_profile",
   "doc": {
    "artifact_type": "host_profile@1",
    "genome_ref": {
     "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "relative_path": "objects/dddddddddddddddd"
    },
    "evidence_state": {
     "annotation": {
      "completeness": "full"
     },
     "condition": {
      "completeness": "partial"
     },
     "parts_evidence": {
      "completeness": "missing"
     }
    },
    "derived": {
     "genome_size": 4641652,
     "gc_percent": 50.8,
     "contig_count": 1
    },
    "gates": [
     {
      "gate": "annotation_parse",
      "status": "OK"
     }
    ]
   },
   "expect": "invalid",
   "note": "bad gate status enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hpf-04",
   "schema": "host_profile",
   "doc": {
    "artifact_type": "host_profile@1",
    "genome_ref": {
     "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
     "relative_path": "objects/dddddddddddddddd"
    },
    "evidence_state": {
     "annotation": {
      "completeness": "full"
     },
     "condition": {
      "completeness": "partial"
     },
     "parts_evidence": {
      "completeness": "missing"
     }
    },
    "derived": {
     "genome_size": 4641652,
     "gc_percent": 50.8,
     "contig_count": 1
    },
    "gates": [
     {
      "gate": "annotation_parse",
      "status": "PASS"
     }
    ],
    "tier": "reference_profile"
   },
   "expect": "invalid",
   "note": "no product tier field on host_profile",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ccd-01",
   "schema": "condition_card",
   "doc": {
    "artifact_type": "condition_card@1",
    "medium": {
     "name": "M9",
     "carbon_sources": [
      "glucose"
     ],
     "oxygen": "aerobic",
     "temperature_c": 37,
     "ph": 7.2
    },
    "culture_mode": "batch",
    "copy_number": {
     "integration_status": "integrated"
    },
    "readout": {
     "kind": "OD600",
     "unit": "a.u."
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ccd-02",
   "schema": "condition_card",
   "doc": {
    "artifact_type": "condition_card@1",
    "medium": {
     "name": "M9",
     "carbon_sources": [
      "glucose"
     ],
     "oxygen": "aerobic",
     "temperature_c": 37,
     "ph": 7.2
    },
    "culture_mode": "batch",
    "copy_number": {
     "integration_status": "integrated"
    }
   },
   "expect": "invalid",
   "note": "missing required readout",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ccd-03",
   "schema": "condition_card",
   "doc": {
    "artifact_type": "condition_card@1",
    "medium": {
     "name": "M9",
     "carbon_sources": [
      "glucose"
     ],
     "oxygen": "oxidative",
     "temperature_c": 37,
     "ph": 7.2
    },
    "culture_mode": "batch",
    "copy_number": {
     "integration_status": "integrated"
    },
    "readout": {
     "kind": "OD600",
     "unit": "a.u."
    }
   },
   "expect": "invalid",
   "note": "bad enum oxygen",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "ccd-04",
   "schema": "condition_card",
   "doc": {
    "artifact_type": "condition_card@1",
    "medium": {
     "name": "M9",
     "carbon_sources": [
      "glucose"
     ],
     "oxygen": "aerobic",
     "temperature_c": 37,
     "ph": 7.2
    },
    "culture_mode": "batch",
    "copy_number": {
     "integration_status": "integrated"
    },
    "readout": {
     "kind": "OD600",
     "unit": "a.u."
    },
    "ph_note": "drift"
   },
   "expect": "invalid",
   "note": "additionalProperties false",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-01",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "12.34",
     "unit": "a.u.",
     "replicates": 3
    },
    "match_grade": "exact",
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "valid",
   "note": "minimal valid (decimal value)",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-02",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "12.34",
     "unit": "a.u.",
     "replicates": 3
    },
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "invalid",
   "note": "missing required match_grade",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-03",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "-0",
     "unit": "a.u.",
     "replicates": 3
    },
    "match_grade": "exact",
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "invalid",
   "note": "decimal -0 rejected",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-04",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "1e3",
     "unit": "a.u.",
     "replicates": 3
    },
    "match_grade": "exact",
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "invalid",
   "note": "decimal exponent rejected",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-05",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "0\n",
     "unit": "a.u.",
     "replicates": 3
    },
    "match_grade": "exact",
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "invalid",
   "note": "decimal trailing-LF (scanner+matcher)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "evi-06",
   "schema": "evidence_item",
   "doc": {
    "artifact_type": "evidence_item@1",
    "source_ref": {
     "kind": "pmid",
     "id": "12345678"
    },
    "host": {
     "organism": "Escherichia coli",
     "strain": "K-12 MG1655"
    },
    "readout": {
     "metric": "sfGFP fluorescence",
     "value": "1.00",
     "unit": "a.u.",
     "replicates": 3
    },
    "match_grade": "exact",
    "matching_policy": {
     "id": "host-condition-match",
     "version": "1"
    }
   },
   "expect": "invalid",
   "note": "decimal trailing zero rejected",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cir-01",
   "schema": "circuit_design",
   "doc": {
    "artifact_type": "circuit_design@1",
    "source": "components",
    "components": [
     {
      "kind": "promoter",
      "part_id": "pJ23119"
     },
     {
      "kind": "cds",
      "part_id": "sfGFP"
     }
    ],
    "template_ref": {
     "template_id": "expression_balance",
     "version": "1"
    },
    "parameters": {
     "copy": 15
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cir-02",
   "schema": "circuit_design",
   "doc": {
    "artifact_type": "circuit_design@1",
    "source": "components",
    "components": [
     {
      "kind": "promoter",
      "part_id": "pJ23119"
     },
     {
      "kind": "cds",
      "part_id": "sfGFP"
     }
    ],
    "parameters": {
     "copy": 15
    }
   },
   "expect": "invalid",
   "note": "missing required template_ref",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cir-03",
   "schema": "circuit_design",
   "doc": {
    "artifact_type": "circuit_design@1",
    "source": "components",
    "components": [
     {
      "kind": "promoter",
      "part_id": "pJ23119"
     },
     {
      "kind": "cds",
      "part_id": "sfGFP"
     }
    ],
    "template_ref": {
     "template_id": "anything_goes",
     "version": "1"
    },
    "parameters": {
     "copy": 15
    }
   },
   "expect": "invalid",
   "note": "template not in two-template set",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cir-04",
   "schema": "circuit_design",
   "doc": {
    "artifact_type": "circuit_design@1",
    "source": "components",
    "components": [
     {
      "kind": "enhancer",
      "part_id": "pJ23119"
     },
     {
      "kind": "cds",
      "part_id": "sfGFP"
     }
    ],
    "template_ref": {
     "template_id": "expression_balance",
     "version": "1"
    },
    "parameters": {
     "copy": 15
    }
   },
   "expect": "invalid",
   "note": "bad component kind enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "kcr-01",
   "schema": "kinetic_crn_ref",
   "doc": {
    "artifact_type": "kinetic_crn_ref@1",
    "model_kind": "kinetic_crn",
    "sbml_ref": {
     "artifact_id": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee",
     "expected_sha256": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee",
     "relative_path": "objects/eeeeeeeeeeeeeeee"
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "kcr-02",
   "schema": "kinetic_crn_ref",
   "doc": {
    "artifact_type": "kinetic_crn_ref@1",
    "model_kind": "constraint_gem",
    "sbml_ref": {
     "artifact_id": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee",
     "expected_sha256": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee",
     "relative_path": "objects/eeeeeeeeeeeeeeee"
    }
   },
   "expect": "invalid",
   "note": "model_kind const",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "kcr-03",
   "schema": "kinetic_crn_ref",
   "doc": {
    "artifact_type": "kinetic_crn_ref@1",
    "model_kind": "kinetic_crn"
   },
   "expect": "invalid",
   "note": "missing required sbml_ref",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "itc-01",
   "schema": "integration_candidate",
   "doc": {
    "artifact_type": "integration_candidate@1",
    "genome_ref": {
     "artifact_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "expected_sha256": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "relative_path": "objects/ffffffffffffffff"
    },
    "ruleset_ref": {
     "artifact_id": "0000000000000000000000000000000000000000000000000000000000000000",
     "expected_sha256": "0000000000000000000000000000000000000000000000000000000000000000",
     "relative_path": "objects/0000000000000000"
    },
    "contig": "chr1",
    "interval": {
     "start": 1000,
     "end": 2000,
     "convention": "0-based-half-open"
    },
    "strand": "plus",
    "cassette": {
     "payload_length": 1500,
     "sequence_identity": "unknown"
    },
    "classification": "preliminary_candidate",
    "screening_stage": "preliminary_spatial",
    "reasons": [
     {
      "rule_id": "r1",
      "detail": "no CDS overlap"
     }
    ],
    "counts": {
     "searched_space": 3,
     "excluded": 1,
     "unknown": 1,
     "mandatory_rule_coverage": [
      {
       "rule_id": "r1",
       "covered": 3
      }
     ]
    }
   },
   "expect": "valid",
   "note": "minimal valid (length-only cassette)",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "itc-02",
   "schema": "integration_candidate",
   "doc": {
    "artifact_type": "integration_candidate@1",
    "genome_ref": {
     "artifact_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "expected_sha256": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "relative_path": "objects/ffffffffffffffff"
    },
    "ruleset_ref": {
     "artifact_id": "0000000000000000000000000000000000000000000000000000000000000000",
     "expected_sha256": "0000000000000000000000000000000000000000000000000000000000000000",
     "relative_path": "objects/0000000000000000"
    },
    "contig": "chr1",
    "interval": {
     "start": 1000,
     "end": 2000,
     "convention": "0-based-half-open"
    },
    "strand": "plus",
    "cassette": {
     "payload_length": 1500,
     "sequence_identity": "unknown"
    },
    "classification": "safe",
    "screening_stage": "preliminary_spatial",
    "reasons": [
     {
      "rule_id": "r1",
      "detail": "no CDS overlap"
     }
    ],
    "counts": {
     "searched_space": 3,
     "excluded": 1,
     "unknown": 1,
     "mandatory_rule_coverage": [
      {
       "rule_id": "r1",
       "covered": 3
      }
     ]
    }
   },
   "expect": "invalid",
   "note": "no safety vocabulary; bad enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "itc-03",
   "schema": "integration_candidate",
   "doc": {
    "artifact_type": "integration_candidate@1",
    "genome_ref": {
     "artifact_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "expected_sha256": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "relative_path": "objects/ffffffffffffffff"
    },
    "ruleset_ref": {
     "artifact_id": "0000000000000000000000000000000000000000000000000000000000000000",
     "expected_sha256": "0000000000000000000000000000000000000000000000000000000000000000",
     "relative_path": "objects/0000000000000000"
    },
    "contig": "chr1",
    "interval": {
     "start": 1000,
     "end": 2000,
     "convention": "0-based-half-open"
    },
    "strand": "plus",
    "cassette": {
     "payload_length": 1500,
     "sequence_identity": "unknown"
    },
    "classification": "preliminary_candidate",
    "screening_stage": "preliminary_spatial",
    "reasons": [
     {
      "rule_id": "r1",
      "detail": "no CDS overlap"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing required counts",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "itc-04",
   "schema": "integration_candidate",
   "doc": {
    "artifact_type": "integration_candidate@1",
    "genome_ref": {
     "artifact_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "expected_sha256": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
     "relative_path": "objects/ffffffffffffffff"
    },
    "ruleset_ref": {
     "artifact_id": "0000000000000000000000000000000000000000000000000000000000000000",
     "expected_sha256": "0000000000000000000000000000000000000000000000000000000000000000",
     "relative_path": "objects/0000000000000000"
    },
    "contig": "chr1",
    "interval": {
     "start": 1000,
     "end": 2000,
     "convention": "1-based"
    },
    "strand": "plus",
    "cassette": {
     "payload_length": 1500,
     "sequence_identity": "unknown"
    },
    "classification": "preliminary_candidate",
    "screening_stage": "preliminary_spatial",
    "reasons": [
     {
      "rule_id": "r1",
      "detail": "no CDS overlap"
     }
    ],
    "counts": {
     "searched_space": 3,
     "excluded": 1,
     "unknown": 1,
     "mandatory_rule_coverage": [
      {
       "rule_id": "r1",
       "covered": 3
      }
     ]
    }
   },
   "expect": "invalid",
   "note": "convention const",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "exs-01",
   "schema": "expression_scenario",
   "doc": {
    "artifact_type": "expression_scenario@1",
    "circuit_design": {
     "artifact_id": "1111111111111111111111111111111111111111111111111111111111111111",
     "expected_sha256": "1111111111111111111111111111111111111111111111111111111111111111",
     "relative_path": "objects/1111111111111111"
    },
    "host_profile": {
     "artifact_id": "2222222222222222222222222222222222222222222222222222222222222222",
     "expected_sha256": "2222222222222222222222222222222222222222222222222222222222222222",
     "relative_path": "objects/2222222222222222"
    },
    "method": "ostir_proxy",
    "results": [
     {
      "element": "sfGFP",
      "metric": "translation_init_rate",
      "value_or_rank": {
       "kind": "rank",
       "rank": 1
      },
      "evidence_level": "E1"
     }
    ],
    "domain_check": "out_of_domain",
    "ranking_set_id": "rank-20261013-1",
    "comparison_scope": "same host, same 5prime context",
    "metric_definition": "ostir proxy rank",
    "higher_is": "high"
   },
   "expect": "valid",
   "note": "minimal valid (proxy rank)",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "exs-02",
   "schema": "expression_scenario",
   "doc": {
    "artifact_type": "expression_scenario@1",
    "circuit_design": {
     "artifact_id": "1111111111111111111111111111111111111111111111111111111111111111",
     "expected_sha256": "1111111111111111111111111111111111111111111111111111111111111111",
     "relative_path": "objects/1111111111111111"
    },
    "host_profile": {
     "artifact_id": "2222222222222222222222222222222222222222222222222222222222222222",
     "expected_sha256": "2222222222222222222222222222222222222222222222222222222222222222",
     "relative_path": "objects/2222222222222222"
    },
    "method": "ostir_proxy",
    "results": [
     {
      "element": "sfGFP",
      "metric": "translation_init_rate",
      "value_or_rank": {
       "kind": "rank",
       "rank": 1
      },
      "evidence_level": "E1"
     }
    ],
    "ranking_set_id": "rank-20261013-1",
    "comparison_scope": "same host, same 5prime context",
    "metric_definition": "ostir proxy rank",
    "higher_is": "high"
   },
   "expect": "invalid",
   "note": "missing required domain_check",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "exs-03",
   "schema": "expression_scenario",
   "doc": {
    "artifact_type": "expression_scenario@1",
    "circuit_design": {
     "artifact_id": "1111111111111111111111111111111111111111111111111111111111111111",
     "expected_sha256": "1111111111111111111111111111111111111111111111111111111111111111",
     "relative_path": "objects/1111111111111111"
    },
    "host_profile": {
     "artifact_id": "2222222222222222222222222222222222222222222222222222222222222222",
     "expected_sha256": "2222222222222222222222222222222222222222222222222222222222222222",
     "relative_path": "objects/2222222222222222"
    },
    "method": "ostir_proxy",
    "results": [
     {
      "element": "sfGFP",
      "metric": "translation_init_rate",
      "value_or_rank": {
       "kind": "median",
       "value": "1.5"
      },
      "evidence_level": "E1"
     }
    ],
    "domain_check": "out_of_domain",
    "ranking_set_id": "rank-20261013-1",
    "comparison_scope": "same host, same 5prime context",
    "metric_definition": "ostir proxy rank",
    "higher_is": "high"
   },
   "expect": "invalid",
   "note": "kind enum value|rank",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "exs-04",
   "schema": "expression_scenario",
   "doc": {
    "artifact_type": "expression_scenario@1",
    "circuit_design": {
     "artifact_id": "1111111111111111111111111111111111111111111111111111111111111111",
     "expected_sha256": "1111111111111111111111111111111111111111111111111111111111111111",
     "relative_path": "objects/1111111111111111"
    },
    "host_profile": {
     "artifact_id": "2222222222222222222222222222222222222222222222222222222222222222",
     "expected_sha256": "2222222222222222222222222222222222222222222222222222222222222222",
     "relative_path": "objects/2222222222222222"
    },
    "method": "absolute_expression",
    "results": [
     {
      "element": "sfGFP",
      "metric": "translation_init_rate",
      "value_or_rank": {
       "kind": "rank",
       "rank": 1
      },
      "evidence_level": "E1"
     }
    ],
    "domain_check": "out_of_domain",
    "ranking_set_id": "rank-20261013-1",
    "comparison_scope": "same host, same 5prime context",
    "metric_definition": "ostir proxy rank",
    "higher_is": "high"
   },
   "expect": "invalid",
   "note": "bad method enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gcr-01",
   "schema": "gem_card_raw",
   "doc": {
    "artifact_type": "gem_card_raw@1",
    "card_schema": "v2",
    "raw_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
    "raw_bytes_ref": {
     "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
     "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
     "relative_path": "objects/3333333333333333"
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gcr-02",
   "schema": "gem_card_raw",
   "doc": {
    "artifact_type": "gem_card_raw@1",
    "card_schema": "v9",
    "raw_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
    "raw_bytes_ref": {
     "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
     "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
     "relative_path": "objects/3333333333333333"
    }
   },
   "expect": "invalid",
   "note": "bad card_schema enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gcr-03",
   "schema": "gem_card_raw",
   "doc": {
    "artifact_type": "gem_card_raw@1",
    "card_schema": "v2",
    "raw_sha256": "3333333333333333333333333333333333333333333333333333333333333333"
   },
   "expect": "invalid",
   "note": "missing raw_bytes_ref",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "mmr-01",
   "schema": "metabolic_model_ref",
   "doc": {
    "artifact_type": "metabolic_model_ref@1",
    "sbml_ref": {
     "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
     "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
     "relative_path": "objects/4444444444444444"
    },
    "card": {
     "card_schema": "v2",
     "card_ref": {
      "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
      "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
      "relative_path": "objects/3333333333333333"
     }
    },
    "model_id": "iML1515",
    "genome_link": {
     "strain": "K-12 MG1655",
     "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
     "match_status": "exact"
    },
    "gpr": {
     "coverage_pct": 100.0,
     "namespace": "b3908",
     "crosswalk_status": "exact"
    },
    "objective": "BIOMASS_Ec_iML1515_core_75p37M",
    "baseline": {
     "feasible": true,
     "growth": "0.876997",
     "solver": {
      "id": "glpk",
      "version": "5.0"
     }
    }
   },
   "expect": "valid",
   "note": "minimal valid (anchored growth)",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "mmr-02",
   "schema": "metabolic_model_ref",
   "doc": {
    "artifact_type": "metabolic_model_ref@1",
    "sbml_ref": {
     "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
     "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
     "relative_path": "objects/4444444444444444"
    },
    "card": {
     "card_schema": "v2",
     "card_ref": {
      "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
      "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
      "relative_path": "objects/3333333333333333"
     }
    },
    "model_id": "iML1515",
    "genome_link": {
     "strain": "K-12 MG1655",
     "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
     "match_status": "exact"
    },
    "gpr": {
     "coverage_pct": 100.0,
     "namespace": "b3908",
     "crosswalk_status": "exact"
    },
    "objective": "BIOMASS_Ec_iML1515_core_75p37M",
    "baseline": {
     "feasible": true,
     "growth": "0.8769970",
     "solver": {
      "id": "glpk",
      "version": "5.0"
     }
    }
   },
   "expect": "invalid",
   "note": "decimal trailing zero",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "mmr-03",
   "schema": "metabolic_model_ref",
   "doc": {
    "artifact_type": "metabolic_model_ref@1",
    "sbml_ref": {
     "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
     "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
     "relative_path": "objects/4444444444444444"
    },
    "card": {
     "card_schema": "v2",
     "card_ref": {
      "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
      "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
      "relative_path": "objects/3333333333333333"
     }
    },
    "model_id": "iML1515",
    "genome_link": {
     "strain": "K-12 MG1655",
     "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
     "match_status": "fuzzy"
    },
    "gpr": {
     "coverage_pct": 100.0,
     "namespace": "b3908",
     "crosswalk_status": "exact"
    },
    "objective": "BIOMASS_Ec_iML1515_core_75p37M",
    "baseline": {
     "feasible": true,
     "growth": "0.876997",
     "solver": {
      "id": "glpk",
      "version": "5.0"
     }
    }
   },
   "expect": "invalid",
   "note": "bad match_status enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "mmr-04",
   "schema": "metabolic_model_ref",
   "doc": {
    "artifact_type": "metabolic_model_ref@1",
    "sbml_ref": {
     "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
     "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
     "relative_path": "objects/4444444444444444"
    },
    "card": {
     "card_schema": "v2",
     "card_ref": {
      "artifact_id": "3333333333333333333333333333333333333333333333333333333333333333",
      "expected_sha256": "3333333333333333333333333333333333333333333333333333333333333333",
      "relative_path": "objects/3333333333333333"
     }
    },
    "model_id": "iML1515",
    "genome_link": {
     "strain": "K-12 MG1655",
     "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
     "match_status": "exact"
    },
    "objective": "BIOMASS_Ec_iML1515_core_75p37M",
    "baseline": {
     "feasible": true,
     "growth": "0.876997",
     "solver": {
      "id": "glpk",
      "version": "5.0"
     }
    }
   },
   "expect": "invalid",
   "note": "missing required gpr",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hmb-01",
   "schema": "host_model_binding",
   "doc": {
    "artifact_type": "host_model_binding@1",
    "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
    "model_sbml_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
    "binding_method": {
     "id": "faa-gff-coordinate-pair",
     "version": "1"
    },
    "evidence_source": "gate5 coordinate pairing",
    "match_result": "exact"
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hmb-02",
   "schema": "host_model_binding",
   "doc": {
    "artifact_type": "host_model_binding@1",
    "genome_sha256": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
    "model_sbml_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
    "binding_method": {
     "id": "faa-gff-coordinate-pair",
     "version": "1"
    },
    "evidence_source": "gate5 coordinate pairing",
    "match_result": "probably"
   },
   "expect": "invalid",
   "note": "bad match_result enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "hmb-03",
   "schema": "host_model_binding",
   "doc": {
    "artifact_type": "host_model_binding@1",
    "model_sbml_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
    "binding_method": {
     "id": "faa-gff-coordinate-pair",
     "version": "1"
    },
    "evidence_source": "gate5 coordinate pairing",
    "match_result": "exact"
   },
   "expect": "invalid",
   "note": "missing genome_sha256",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gpr-01",
   "schema": "gpr_proof",
   "doc": {
    "artifact_type": "gpr_proof@1",
    "canonical_gpr_ast": "(OR b3908 b3919)",
    "ast_hash": "5555555555555555555555555555555555555555555555555555555555555555",
    "source_gene_ids": [
     "Atu3768"
    ],
    "gem_gene_ids": [
     "b3908",
     "b3919"
    ],
    "namespace": "K-12",
    "reaction_id": "R_GLUCOSE",
    "mapping_path": [
     "Atu3768",
     "b3908",
     "R_GLUCOSE"
    ]
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gpr-02",
   "schema": "gpr_proof",
   "doc": {
    "artifact_type": "gpr_proof@1",
    "canonical_gpr_ast": "(OR b3908 b3919)",
    "ast_hash": "5555555555555555555555555555555555555555555555555555555555555555",
    "source_gene_ids": [
     "Atu3768"
    ],
    "gem_gene_ids": [
     "b3908",
     "b3919"
    ],
    "namespace": "K-12",
    "reaction_id": "R_GLUCOSE"
   },
   "expect": "invalid",
   "note": "missing mapping_path",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "gpr-03",
   "schema": "gpr_proof",
   "doc": {
    "artifact_type": "gpr_proof@1",
    "canonical_gpr_ast": "(OR b3908 b3919)",
    "ast_hash": "not-a-hash",
    "source_gene_ids": [
     "Atu3768"
    ],
    "gem_gene_ids": [
     "b3908",
     "b3919"
    ],
    "namespace": "K-12",
    "reaction_id": "R_GLUCOSE",
    "mapping_path": [
     "Atu3768",
     "b3908",
     "R_GLUCOSE"
    ]
   },
   "expect": "invalid",
   "note": "ast_hash pattern",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-01",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "user_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
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       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
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       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
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       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "12.34",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "user_explicit_assumption",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "valid",
   "note": "user_calibrated with full refs",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-02",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "qualitative_direction",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "12.34",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "sequence_proxy",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "valid",
   "note": "sequence_proxy in qualitative mode",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-03",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "evidence_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "12.34",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "manual_override",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "invalid",
   "note": "manual_override not allowed in evidence mode",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-04",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "user_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "12.34",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "sequence_proxy",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "invalid",
   "note": "sequence_proxy only drives qualitative",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-05",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "user_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "12.34",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "user_explicit_assumption",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing rule ref",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-06",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "user_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
       "artifact_id": "7777777777777777777777777777777777777777777777777777777777777777",
       "expected_sha256": "7777777777777777777777777777777777777777777777777777777777777777",
       "relative_path": "objects/7777777777777777"
      },
      "source_gene": {
       "namespace": "K-12",
       "id": "b0001"
      },
      "reaction_id": "R_GLUCOSE",
      "reaction_direction": "forward",
      "operation": "set_upper_bound",
      "baseline_bound": "1000",
      "derived_bound": "0.0",
      "unit": "mmol/gDW/h",
      "mapping_function": {
       "id": "linear",
       "version": "1",
       "parameters": {
        "scale": 0.5
       }
      },
      "condition_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
      "input_kind": "user_explicit_assumption",
      "evidence_refs": [
       "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
      ],
      "assumption_refs": [
       "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
      ],
      "confidence": "medium"
     }
    ]
   },
   "expect": "invalid",
   "note": "decimal trailing zero (derived_bound)",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cpl-07",
   "schema": "coupling_profile",
   "doc": {
    "artifact_type": "coupling_profile@1",
    "mode": "user_calibrated_bound",
    "rules": [
     {
      "rule_id": "rule-1",
      "model_ref": {
       "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
       "expected_sha256": "4444444444444444444444444444444444444444444444444444444444444444",
       "relative_path": "objects/4444444444444444"
      },
      "host_profile": {
       "artifact_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "expected_sha256": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
       "relative_path": "objects/dddddddddddddddd"
      },
      "host_model_binding_ref": {
       "artifact_id": "6666666666666666666666666666666666666666666666666666666666666666",
       "expected_sha256": "6666666666666666666666666666666666666666666666666666666666666666",
       "relative_path": "objects/6666666666666666"
      },
      "gpr_proof_ref": {
       "artifact_id": "5555555555555555555555555555555555555555555555555555555555555555",
       "expected_sha256": "5555555555555555555555555555555555555555555555555555555555555555",
       "relative_path": "objects/5555555555555555"
      },
      "condition_card_ref": {
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       {
        "rule_id": "rule-1",
        "reaction_id": "R_GLUCOSE",
        "old_value": "10",
        "new_value": "0",
        "unit": "mmol/gDW/h"
       }
      ],
      "fba": {
       "status": "optimal",
       "value": "0.85"
      },
      "fva": {
       "intervals": [
        {
         "reaction_id": "R_GLUCOSE",
         "min": "1.0",
         "max": "10"
        }
       ]
      },
      "pfba": {
       "status": "optimal",
       "value": "0.84"
      },
      "model_hash": "4444444444444444444444444444444444444444444444444444444444444444",
      "diff_hash": "8888888888888888888888888888888888888888888888888888888888888888",
      "medium_artifact_id": "9999999999999999999999999999999999999999999999999999999999999999",
      "applied_rule_ids": [
       "rule-1"
      ],
      "mapping_proof_ids": [
       "5555555555555555555555555555555555555555555555555555555555555555"
      ],
      "target_metric": "EX_ac_e"
     }
    ],
    "claim_targets": [
     {
      "kind": "growth",
      "direction": "ROBUST_DIRECTION"
     }
    ]
   },
   "expect": "invalid",
   "note": "decimal trailing zero in FVA",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tcd-01",
   "schema": "tier_decision",
   "doc": {
    "artifact_type": "tier_decision@1",
    "policy_id": "capability-policy",
    "policy_version": "1",
    "policy_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
    "input_snapshot_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
    "per_operation": [
     {
      "operation": "bio_design_consequence",
      "max_tier": "reference_profile",
      "gates": [
       {
        "gate": "exact_binding",
        "status": "PASS"
       }
      ],
      "decision": "allow",
      "capabilities": [
       "quantitative_consequence"
      ],
      "reason_codes": []
     }
    ]
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tcd-02",
   "schema": "tier_decision",
   "doc": {
    "artifact_type": "tier_decision@1",
    "policy_id": "capability-policy",
    "policy_version": "1",
    "policy_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc",
    "input_snapshot_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
    "per_operation": [
     {
      "operation": "bio_design_consequence",
      "max_tier": "maybe",
      "gates": [
       {
        "gate": "exact_binding",
        "status": "PASS"
       }
      ],
      "decision": "allow",
      "capabilities": [
       "quantitative_consequence"
      ],
      "reason_codes": []
     }
    ]
   },
   "expect": "invalid",
   "note": "bad tier enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tcd-03",
   "schema": "tier_decision",
   "doc": {
    "artifact_type": "tier_decision@1",
    "policy_id": "capability-policy",
    "policy_version": "1",
    "input_snapshot_id": "dddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddddd",
    "per_operation": [
     {
      "operation": "bio_design_consequence",
      "max_tier": "reference_profile",
      "gates": [
       {
        "gate": "exact_binding",
        "status": "PASS"
       }
      ],
      "decision": "allow",
      "capabilities": [
       "quantitative_consequence"
      ],
      "reason_codes": []
     }
    ]
   },
   "expect": "invalid",
   "note": "missing policy_hash",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "npo-01",
   "schema": "numeric_policy",
   "doc": {
    "artifact_type": "numeric_policy@1",
    "fva_fraction_of_optimum": 0.99,
    "solver": {
     "id": "glpk",
     "version": "5.0"
    },
    "tolerance": 1e-06,
    "direction_epsilon": "0.001",
    "near_zero_rule": "abs(value) < epsilon flags near-zero",
    "interval_zero_crossing_rule": "crossing_flags_indeterminate"
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "npo-02",
   "schema": "numeric_policy",
   "doc": {
    "artifact_type": "numeric_policy@1",
    "fva_fraction_of_optimum": 0.99,
    "solver": {
     "id": "glpk",
     "version": "5.0"
    },
    "tolerance": 1e-06,
    "direction_epsilon": "-0",
    "near_zero_rule": "abs(value) < epsilon flags near-zero",
    "interval_zero_crossing_rule": "crossing_flags_indeterminate"
   },
   "expect": "invalid",
   "note": "decimal -0",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "npo-03",
   "schema": "numeric_policy",
   "doc": {
    "artifact_type": "numeric_policy@1",
    "fva_fraction_of_optimum": 0.99,
    "solver": {
     "id": "glpk",
     "version": "5.0"
    },
    "tolerance": 1e-06,
    "direction_epsilon": "0.001",
    "near_zero_rule": "abs(value) < epsilon flags near-zero",
    "interval_zero_crossing_rule": "always_ok"
   },
   "expect": "invalid",
   "note": "bad crossing rule enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "unv-01",
   "schema": "unit_vocabulary",
   "doc": {
    "artifact_type": "unit_vocabulary@1",
    "units": [
     {
      "unit_id": "mmol_per_gdw_per_h",
      "symbol": "mmol/gDW/h",
      "dimension": [
       {
        "base": "amount",
        "exponent": 1
       },
       {
        "base": "mass",
        "exponent": -1
       },
       {
        "base": "time",
        "exponent": -1
       }
      ]
     }
    ],
    "conversions": [
     {
      "from": "mmol_per_gdw_per_h",
      "to": "mmol_per_gdw_per_h",
      "factor": "1"
     }
    ],
    "forbidden_mixes": [
     {
      "a": "a.u.",
      "b": "mmol_per_gdw_per_h",
      "reason": "proxy vs capacity"
     }
    ]
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "unv-02",
   "schema": "unit_vocabulary",
   "doc": {
    "artifact_type": "unit_vocabulary@1",
    "units": [
     {
      "unit_id": "mmol_per_gdw_per_h",
      "symbol": "mmol/gDW/h",
      "dimension": [
       {
        "base": "amount",
        "exponent": 1
       },
       {
        "base": "mass",
        "exponent": -1
       },
       {
        "base": "time",
        "exponent": -1
       }
      ]
     }
    ],
    "forbidden_mixes": [
     {
      "a": "a.u.",
      "b": "mmol_per_gdw_per_h",
      "reason": "proxy vs capacity"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing conversions",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "unv-03",
   "schema": "unit_vocabulary",
   "doc": {
    "artifact_type": "unit_vocabulary@1",
    "units": [
     {
      "unit_id": "mmol_per_gdw_per_h",
      "symbol": "mmol/gDW/h",
      "dimension": [
       {
        "base": "currency",
        "exponent": 1
       },
       {
        "base": "mass",
        "exponent": -1
       },
       {
        "base": "time",
        "exponent": -1
       }
      ]
     }
    ],
    "conversions": [
     {
      "from": "mmol_per_gdw_per_h",
      "to": "mmol_per_gdw_per_h",
      "factor": "1"
     }
    ],
    "forbidden_mixes": [
     {
      "a": "a.u.",
      "b": "mmol_per_gdw_per_h",
      "reason": "proxy vs capacity"
     }
    ]
   },
   "expect": "invalid",
   "note": "bad base dimension",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "irs-01",
   "schema": "integration_ruleset",
   "doc": {
    "artifact_type": "integration_ruleset@1",
    "ruleset_id": "default-integration",
    "version": "1",
    "rules": [
     {
      "rule_id": "r1",
      "kind": "feature_overlap",
      "mandatory": true,
      "params": {
       "window": 200
      }
     }
    ]
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "irs-02",
   "schema": "integration_ruleset",
   "doc": {
    "artifact_type": "integration_ruleset@1",
    "ruleset_id": "default-integration",
    "rules": [
     {
      "rule_id": "r1",
      "kind": "feature_overlap",
      "mandatory": true,
      "params": {
       "window": 200
      }
     }
    ]
   },
   "expect": "invalid",
   "note": "missing version",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "irs-03",
   "schema": "integration_ruleset",
   "doc": {
    "artifact_type": "integration_ruleset@1",
    "ruleset_id": "default-integration",
    "version": "1",
    "rules": [
     {
      "rule_id": "r1",
      "kind": "vibes",
      "mandatory": true,
      "params": {
       "window": 200
      }
     }
    ]
   },
   "expect": "invalid",
   "note": "bad rule kind",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "pvd-01",
   "schema": "provenance_dag",
   "doc": {
    "artifact_type": "provenance_dag@1",
    "nodes": [
     {
      "id": "4444444444444444444444444444444444444444444444444444444444444444",
      "kind": "artifact",
      "type": "metabolic_model_ref@1"
     },
     {
      "id": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "claim",
      "type": "claim"
     }
    ],
    "edges": [
     {
      "from": "4444444444444444444444444444444444444444444444444444444444444444",
      "to": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "supports"
     }
    ],
    "dag_hash": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee"
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "pvd-02",
   "schema": "provenance_dag",
   "doc": {
    "artifact_type": "provenance_dag@1",
    "nodes": [
     {
      "id": "4444444444444444444444444444444444444444444444444444444444444444",
      "kind": "artifact",
      "type": "metabolic_model_ref@1"
     },
     {
      "id": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "claim",
      "type": "claim"
     }
    ],
    "edges": [
     {
      "from": "4444444444444444444444444444444444444444444444444444444444444444",
      "to": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "causes"
     }
    ],
    "dag_hash": "eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee"
   },
   "expect": "invalid",
   "note": "bad edge kind",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "pvd-03",
   "schema": "provenance_dag",
   "doc": {
    "artifact_type": "provenance_dag@1",
    "nodes": [
     {
      "id": "4444444444444444444444444444444444444444444444444444444444444444",
      "kind": "artifact",
      "type": "metabolic_model_ref@1"
     },
     {
      "id": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "claim",
      "type": "claim"
     }
    ],
    "edges": [
     {
      "from": "4444444444444444444444444444444444444444444444444444444444444444",
      "to": "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb",
      "kind": "supports"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing dag_hash",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-01",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "FACT",
    "status": "SUPPORTED",
    "evidence_refs": [
     "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
    ]
   },
   "expect": "valid",
   "note": "FACT with evidence_refs",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-02",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "ASSUMPTION",
    "status": "CONDITIONAL",
    "assumption_refs": [
     "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
    ]
   },
   "expect": "valid",
   "note": "ASSUMPTION with assumption_refs",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-03",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "INFERENCE",
    "status": "CONDITIONAL",
    "method_ref": "fba",
    "domain_ref": "iML1515",
    "uncertainty": "solver tolerance"
   },
   "expect": "valid",
   "note": "INFERENCE with full fields",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-04",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "FACT",
    "status": "SUPPORTED"
   },
   "expect": "invalid",
   "note": "FACT without evidence_refs",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-05",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "GUESS",
    "status": "SUPPORTED"
   },
   "expect": "invalid",
   "note": "bad classification enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "clm-06",
   "schema": "claim",
   "doc": {
    "claim_id": "ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff",
    "classification": "FACT",
    "status": "SUPPORTED",
    "evidence_refs": [
     "bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb"
    ],
    "limitations": [
     ""
    ]
   },
   "expect": "invalid",
   "note": "empty limitation string",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tsr-01",
   "schema": "tool_result",
   "doc": {
    "artifact_type": "tool_result@1",
    "audit_only": true,
    "status": "OK",
    "generated_by": "ts_wrapper"
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tsr-02",
   "schema": "tool_result",
   "doc": {
    "artifact_type": "tool_result@1",
    "audit_only": true,
    "status": "INVALID_INPUT",
    "generated_by": "python_worker",
    "reason_code": "bad_input"
   },
   "expect": "valid",
   "note": "error terminal state",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tsr-03",
   "schema": "tool_result",
   "doc": {
    "artifact_type": "tool_result@1",
    "audit_only": false,
    "status": "OK",
    "generated_by": "ts_wrapper"
   },
   "expect": "invalid",
   "note": "audit_only const true",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "tsr-04",
   "schema": "tool_result",
   "doc": {
    "artifact_type": "tool_result@1",
    "audit_only": true,
    "status": "MAYBE",
    "generated_by": "ts_wrapper"
   },
   "expect": "invalid",
   "note": "bad status enum",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cms-01",
   "schema": "case_manifest",
   "doc": {
    "schema_version": "1.0",
    "case_content_id": "0000000000000000000000000000000000000000000000000000000000000000",
    "artifacts": [
     {
      "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
      "type": "metabolic_model_ref@1",
      "inputs": [
       "3333333333333333333333333333333333333333333333333333333333333333"
      ],
      "producer": "bio_design_consequence@0.6.x",
      "schema_major": "1",
      "canonical_path": "objects/4444444444444444"
     }
    ],
    "policy": {
     "policy_id": "capability-policy",
     "policy_version": "1",
     "policy_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
    }
   },
   "expect": "valid",
   "note": "minimal valid",
   "frozen": {
    "verdict": "valid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cms-02",
   "schema": "case_manifest",
   "doc": {
    "schema_version": "1.0",
    "case_content_id": "0000000000000000000000000000000000000000000000000000000000000000",
    "artifacts": [
     {
      "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
      "type": "mystery@1",
      "inputs": [
       "3333333333333333333333333333333333333333333333333333333333333333"
      ],
      "producer": "bio_design_consequence@0.6.x",
      "schema_major": "1",
      "canonical_path": "objects/4444444444444444"
     }
    ],
    "policy": {
     "policy_id": "capability-policy",
     "policy_version": "1",
     "policy_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
    }
   },
   "expect": "invalid",
   "note": "unknown artifact type",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cms-03",
   "schema": "case_manifest",
   "doc": {
    "schema_version": "1.0",
    "case_content_id": "0000000000000000000000000000000000000000000000000000000000000000",
    "artifacts": [
     {
      "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
      "type": "metabolic_model_ref@1",
      "inputs": [
       "3333333333333333333333333333333333333333333333333333333333333333"
      ],
      "producer": "bio_design_consequence@0.6.x",
      "schema_major": "1",
      "canonical_path": "objects/4444444444444444"
     }
    ]
   },
   "expect": "invalid",
   "note": "missing policy",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  },
  {
   "id": "cms-04",
   "schema": "case_manifest",
   "doc": {
    "schema_version": "1.0",
    "case_content_id": "0000000000000000000000000000000000000000000000000000000000000000",
    "artifacts": [
     {
      "artifact_id": "4444444444444444444444444444444444444444444444444444444444444444",
      "type": "metabolic_model_ref@1",
      "inputs": [
       "3333333333333333333333333333333333333333333333333333333333333333"
      ],
      "producer": "bio_design_consequence@0.6.x",
      "schema_major": "2",
      "canonical_path": "objects/4444444444444444"
     }
    ],
    "policy": {
     "policy_id": "capability-policy",
     "policy_version": "1",
     "policy_hash": "cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc"
    }
   },
   "expect": "invalid",
   "note": "schema_major const",
   "frozen": {
    "verdict": "invalid",
    "python": true,
    "node": true
   }
  }
 ]
}