packageName: Bio
description: Bioinformatics for macromolecules — sequence similarity/diversity/subsequence/substructure search, notation conversion (FASTA, HELM, BILN, separator), MSA (kalign, MAFFT/PepSeA), WebLogo, composition analysis, sequence space, activity cliffs, antibody numbering (IMGT/Kabat/Chothia/AHo), liability scanning, HELM↔atomic-level conversion, and monomer library management
keywords:
  - bioinformatics
  - macromolecule
  - sequence
  - peptide
  - protein
  - dna
  - rna
  - sar
  - fasta
  - helm
  - biln
  - separator notation
  - notation conversion
  - bam import
  - sequence similarity search
  - sequence diversity search
  - subsequence search
  - substructure search
  - identity
  - msa
  - multiple sequence alignment
  - kalign
  - pepsea
  - mafft
  - weblogo
  - composition analysis
  - sequence space
  - activity cliffs
  - region extraction
  - vd regions
  - compare sequences
  - antibody numbering
  - IMGT
  - Kabat
  - Chothia
  - AHo
  - liability scanning
  - deamidation
  - oxidation
  - annotations
  - immunum
  - atomic level
  - molecules to helm
  - sequence to molecule
  - monomer library
  - monomer collection
  - monomer rendering
  - sequence cell renderer
apiRef: src/package-api.ts
docsRef: ../../help/datagrok/solutions/domains/bio/bio.md