import * as DG from 'datagrok-api/dg';
import { IViewer } from './viewer';
import { FilterSources, PositionHeight } from './web-logo';
export declare enum VdRegionType {
    Unknown = "unknown",
    FR = "framework",
    CDR = "cdr"
}
/** Describes V-DOMAIN (IG and TR) region (of multiple alignment)
 * https://www.imgt.org/IMGTScientificChart/Numbering/IMGTIGVLsuperfamily.html
 * Attributes {@link positionStartName} and {@link positionEndName} are strings because
 * they correspond to position names as column names in ANARCI output (with a character index possible).
 */
export interface VdRegion {
    readonly type: VdRegionType;
    readonly name: string;
    readonly chain: string;
    readonly order: number;
    /** Name of the column containing sequence */
    readonly sequenceColumnName: string;
    /** Region start position (inclusive) */
    readonly positionStartName: string;
    /** Region end position (inclusive) */
    readonly positionEndName: string;
}
export declare const VdRegionsPropsDefault: {
    regionTypes: VdRegionType[];
    chains: string[];
    skipEmptyPositions: boolean;
    fitWidth: boolean;
    positionWidth: number;
    positionHeight: PositionHeight;
    filterSource: FilterSources;
};
export type VdRegionsProps = Required<typeof VdRegionsPropsDefault>;
/** Interface for VdRegionsViewer from @datagrok/bio to unbind dependency to Bio package */
export interface IVdRegionsViewer extends VdRegionsProps, IViewer {
    init(): Promise<void>;
    /** List of regions referencing the column with sequences by {@link VdRegion.sequenceColumnName }. */
    setData(regions: VdRegion[]): void;
}
declare module 'datagrok-api/dg' {
    interface DataFramePlotHelper {
        fromType(viewerType: 'VdRegions', options: Partial<VdRegionsProps>): Promise<DG.Viewer<VdRegionsProps> & IVdRegionsViewer>;
    }
}
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