/**
 * @fileoverview `brapi_get_germplasm` — fetch a single germplasm with
 * attributes and direct parents, plus companion counts (studies the
 * germplasm has appeared in, direct parents, direct descendants) to signal
 * where to drill next.
 *
 * @module mcp-server/tools/definitions/brapi-get-germplasm.tool
 */
import { z } from '@cyanheads/mcp-ts-core';
import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
export declare const brapiGetGermplasm: import("@cyanheads/mcp-ts-core").ToolDefinition<z.ZodObject<{
    germplasmDbId: z.ZodString;
    alias: z.ZodOptional<z.ZodString>;
}, z.core.$strip>, z.ZodObject<{
    alias: z.ZodString;
    germplasm: z.ZodObject<{
        germplasmDbId: z.ZodString;
        germplasmName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        germplasmPUI: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        commonCropName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        accessionNumber: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        genus: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        species: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        subtaxa: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        defaultDisplayName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        pedigree: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        biologicalStatusOfAccessionDescription: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        germplasmOrigin: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodObject<{}, z.core.$loose>>>>;
        countryOfOriginCode: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        collection: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        instituteCode: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        instituteName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        synonyms: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodObject<{
            synonym: z.ZodOptional<z.ZodNullable<z.ZodString>>;
            type: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        }, z.core.$loose>>>>;
    }, z.core.$loose>;
    parents: z.ZodArray<z.ZodObject<{
        germplasmDbId: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        germplasmName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        parentType: z.ZodOptional<z.ZodNullable<z.ZodString>>;
    }, z.core.$loose>>;
    attributes: z.ZodArray<z.ZodObject<{
        attributeDbId: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        attributeName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        attributeValue: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        determinedDate: z.ZodOptional<z.ZodNullable<z.ZodString>>;
    }, z.core.$loose>>;
    studyCount: z.ZodOptional<z.ZodNumber>;
    directParentCount: z.ZodNumber;
    directDescendantCount: z.ZodOptional<z.ZodNumber>;
    warnings: z.ZodArray<z.ZodString>;
}, z.core.$strip>, readonly [{
    readonly reason: "unknown_alias";
    readonly code: JsonRpcErrorCode.NotFound;
    readonly when: "No connection has been registered under the requested alias";
    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_get_germplasm.";
}, {
    readonly reason: "germplasm_not_found";
    readonly code: JsonRpcErrorCode.NotFound;
    readonly when: "Upstream returned no germplasm record for the requested DbId";
    readonly recovery: "Verify the germplasmDbId on the target server, or run brapi_find_germplasm to discover valid IDs.";
}], undefined>;
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