/**
 * @fileoverview `brapi_find_germplasm` — search germplasm by name, synonym,
 * accession, attribute, or free text. Matches BrAPI's registered-synonym
 * semantics. Returns distributions for crop / genus / species / collection
 * and spills to a dataframe when the upstream total exceeds loadLimit.
 *
 * @module mcp-server/tools/definitions/brapi-find-germplasm.tool
 */
import { z } from '@cyanheads/mcp-ts-core';
import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
export declare const brapiFindGermplasm: import("@cyanheads/mcp-ts-core").ToolDefinition<z.ZodObject<{
    alias: z.ZodOptional<z.ZodString>;
    names: z.ZodOptional<z.ZodArray<z.ZodString>>;
    germplasmDbIds: z.ZodOptional<z.ZodArray<z.ZodString>>;
    germplasmPUIs: z.ZodOptional<z.ZodArray<z.ZodString>>;
    accessionNumbers: z.ZodOptional<z.ZodArray<z.ZodString>>;
    crops: z.ZodOptional<z.ZodArray<z.ZodString>>;
    synonyms: z.ZodOptional<z.ZodArray<z.ZodString>>;
    collections: z.ZodOptional<z.ZodArray<z.ZodString>>;
    genus: z.ZodOptional<z.ZodString>;
    species: z.ZodOptional<z.ZodString>;
    text: z.ZodOptional<z.ZodString>;
    loadLimit: z.ZodOptional<z.ZodNumber>;
    extraFilters: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
}, z.core.$strip>, z.ZodObject<{
    alias: z.ZodString;
    results: z.ZodArray<z.ZodObject<{
        germplasmDbId: z.ZodString;
        germplasmName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        germplasmPUI: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        commonCropName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        accessionNumber: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        genus: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        species: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        subtaxa: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        defaultDisplayName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        pedigree: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        biologicalStatusOfAccessionDescription: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        germplasmOrigin: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodObject<{}, z.core.$loose>>>>;
        countryOfOriginCode: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        collection: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        instituteCode: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        instituteName: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        synonyms: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodObject<{
            synonym: z.ZodOptional<z.ZodNullable<z.ZodString>>;
            type: z.ZodOptional<z.ZodNullable<z.ZodString>>;
        }, z.core.$loose>>>>;
    }, z.core.$loose>>;
    hasMore: z.ZodBoolean;
    distributions: z.ZodObject<{
        commonCropName: z.ZodRecord<z.ZodString, z.ZodNumber>;
        genus: z.ZodRecord<z.ZodString, z.ZodNumber>;
        species: z.ZodRecord<z.ZodString, z.ZodNumber>;
        collection: z.ZodRecord<z.ZodString, z.ZodNumber>;
        countryOfOriginCode: z.ZodRecord<z.ZodString, z.ZodNumber>;
    }, z.core.$strip>;
    dataframe: z.ZodOptional<z.ZodObject<{
        tableName: z.ZodString;
        rowCount: z.ZodNumber;
        columns: z.ZodArray<z.ZodString>;
        columnLegend: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodString>>;
        createdAt: z.ZodString;
        expiresAt: z.ZodString;
        truncated: z.ZodOptional<z.ZodBoolean>;
        maxRows: z.ZodOptional<z.ZodNumber>;
        totalCount: z.ZodOptional<z.ZodNumber>;
    }, z.core.$strip>>;
}, z.core.$strip>, readonly [{
    readonly reason: "unknown_alias";
    readonly code: JsonRpcErrorCode.NotFound;
    readonly when: "No connection has been registered under the requested alias";
    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_find_germplasm.";
}, {
    readonly reason: "all_filters_dropped";
    readonly code: JsonRpcErrorCode.ValidationError;
    readonly when: "The active dialect dropped every filter the agent supplied — the upstream server does not honor any of the requested scope filters on this endpoint, so the call would silently widen to the unfiltered baseline.";
    readonly recovery: "Drop the unsupported filters and rescope by names, germplasmDbIds, germplasmPUIs, accessionNumbers, crops, synonyms, genus, or species — these filter paths are honored on the active dialect.";
}], {
    readonly totalCount: z.ZodNumber;
    readonly returnedCount: z.ZodNumber;
    readonly appliedFilters: z.ZodRecord<z.ZodString, z.ZodUnknown>;
    readonly refinementHint: z.ZodOptional<z.ZodString>;
    readonly notice: z.ZodOptional<z.ZodString>;
    readonly warnings: z.ZodArray<z.ZodString>;
}>;
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