import { AnyPosition } from './position';
import { Prefix } from './constants';
declare type OntologyTerm = {
    name?: string;
    sourceId?: string;
    sourceIdVersion?: string;
    displayName?: string;
};
declare const stripParentheses: (breakRepr: string) => string;
interface VariantNotation {
    reference1: OntologyTerm | string;
    reference2: OntologyTerm | string;
    untemplatedSeq?: string | null;
    untemplatedSeqSize?: number;
    type: OntologyTerm | string;
    refSeq?: string | null;
    prefix: Prefix | null;
    multiFeature: boolean;
    truncation?: number | null;
    notationType?: string;
    break1Start: AnyPosition;
    break1End?: AnyPosition;
    break2Start?: AnyPosition;
    break2End?: AnyPosition;
    break1Repr: string;
    break2Repr?: string;
    noFeatures?: boolean;
}
declare const createVariantNotation: ({ requireFeatures, reference1, reference2, untemplatedSeq: untemplatedSeqIn, untemplatedSeqSize: untemplatedSeqSizeIn, type: typeIn, refSeq, prefix, multiFeature: multiFeatureIn, truncation, notationType, break1Start: break1StartIn, break1End: break1EndIn, break2Start: break2StartIn, break2End: break2EndIn, }: {
    requireFeatures?: boolean | undefined;
    reference1: string | OntologyTerm;
    reference2: string | OntologyTerm;
    untemplatedSeq?: string | null | undefined;
    untemplatedSeqSize?: number | null | undefined;
    type: string;
    refSeq?: string | null | undefined;
    prefix: Prefix | null;
    multiFeature?: boolean | undefined;
    truncation?: number | undefined;
    notationType?: string | undefined;
    break1Start: AnyPosition;
    break1End?: AnyPosition | undefined;
    break2Start?: AnyPosition | undefined;
    break2End?: AnyPosition | undefined;
}) => VariantNotation;
declare const jsonifyVariant: (variant: VariantNotation) => {
    [key: string]: string;
};
declare const stringifyVariant: (variant: VariantNotation, newFusion?: boolean) => string;
/**
 * Parse variant shorthand. Checks and validates notation
 *
 * @param {string} string the variant to be parsed
 *
 * @returns {object} the parsed content
 */
declare const parseVariant: (string: any, requireFeatures?: boolean) => VariantNotation;
export { parseVariant, jsonifyVariant, stringifyVariant, stripParentheses, createVariantNotation, };